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The map label for this gene is frx-3 [H]

Identifier: 197118461

GI number: 197118461

Start: 2404952

End: 2405215

Strand: Direct

Name: frx-3 [H]

Synonym: Gbem_2079

Alternate gene names: 197118461

Gene position: 2404952-2405215 (Clockwise)

Preceding gene: 197118460

Following gene: 197118462

Centisome position: 52.11

GC content: 56.44

Gene sequence:

>264_bases
ATGGCTTACATCACCGGTTTGACCAAGGAAAAGAAAGAGTGGACCCCGCAGTTCATCACATCCATCGACGAAGAAACCTG
CATCGGGTGCGGTCGCTGTTTCAAGGTCTGCGCCCATGACGTGCTGACCTTTGAGGAGGTGGACGAGGACGATTCGGCCA
AGATGTTCATGAAAGTCGACAACCCCGGCAACTGTATCGGCTGCCAGGCCTGCGGCAGGACCTGCTCCAAGAAGTGCTTC
ACCTTCGCGCCGGTCGTAGCTTAG

Upstream 100 bases:

>100_bases
GGTCATTTTGGGACGAGGATTAGTTTTCCGGTTCGGGTGGACGTTCAGGTGAATGATCAATAAAACGTGGATAAACCATC
AAGATAAAAGGAGAAGTATC

Downstream 100 bases:

>100_bases
AAGCGCAGATAAAGATAAAGATTGAGATTAAGCAAACCAACTTCTTCAGACCATTCCAGGTTTTCACTTAATCTCAATCT
TAATCTCAATCTGGTTTATA

Product: ferredoxin family protein

Products: NA

Alternate protein names: Ferredoxin III; FdIII [H]

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MAYITGLTKEKKEWTPQFITSIDEETCIGCGRCFKVCAHDVLTFEEVDEDDSAKMFMKVDNPGNCIGCQACGRTCSKKCF
TFAPVVA

Sequences:

>Translated_87_residues
MAYITGLTKEKKEWTPQFITSIDEETCIGCGRCFKVCAHDVLTFEEVDEDDSAKMFMKVDNPGNCIGCQACGRTCSKKCF
TFAPVVA
>Mature_86_residues
AYITGLTKEKKEWTPQFITSIDEETCIGCGRCFKVCAHDVLTFEEVDEDDSAKMFMKVDNPGNCIGCQACGRTCSKKCFT
FAPVVA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014283
- InterPro:   IPR012285 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 9643; Mature: 9512

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
13.8 %Cys+Met (Translated Protein)
10.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
12.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYITGLTKEKKEWTPQFITSIDEETCIGCGRCFKVCAHDVLTFEEVDEDDSAKMFMKVD
CCCCCCCCCCCHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NPGNCIGCQACGRTCSKKCFTFAPVVA
CCCCEEEHHHHCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AYITGLTKEKKEWTPQFITSIDEETCIGCGRCFKVCAHDVLTFEEVDEDDSAKMFMKVD
CCCCCCCCCCHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NPGNCIGCQACGRTCSKKCFTFAPVVA
CCCCEEEHHHHCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8709854 [H]