Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118441

Identifier: 197118441

GI number: 197118441

Start: 2372276

End: 2373358

Strand: Direct

Name: 197118441

Synonym: Gbem_2059

Alternate gene names: NA

Gene position: 2372276-2373358 (Clockwise)

Preceding gene: 308535284

Following gene: 197118442

Centisome position: 51.4

GC content: 61.59

Gene sequence:

>1083_bases
ATGTTATTCGGACTTTTCAAGAAGAAGGATCATCGTTACTACCAGACCCAGGGCGCAAAGTTCCTGGCGGCGGAGCGCTA
TGCCGACGCCCGGGTCGACTTTCTCGAAGCGCTGAGGCTTTGCCCGGCTGACGCCGCCAACGACCAGGGCGAGATCCGCC
AGGGGCTCGACCACTCGGGAAACCGCCTGGGCGAGCTCAACCTGGAGGAGGGGGAGCATTCCCTGAACCAGGGTGAGCTG
CAAAAGGCGTTCGACCACTTCACCCTTGCTGGCGAACTGGCAGCGGACCAGGGGATCAAGGCCAAGGCAACGGCGGGGCT
TGCCAGGGTGCAGCAGGGGGACGCGCCCCAGTCCGCGCCCGTTGCCGCAGCCGCTGCTCCCACGGCTGCCGCCGCTCCCG
CGAAGGAAGTTGCCGGCCCCTACAAACCGCACGGCGGAGGCTCCTGCACCTCCTGCGGCACCCATGCACACCACAAGCCT
CTGGAGGCTGAGCCCGCCGGATTCGATCTCGCGGAAGAAGACCAGTTCCACCTCATGGTGGCGCCGCTTCCCGGCGACCT
CCCCGCCCGTTACGGCGCCATGGGGAGCAAATTCGCCCAGGCCTATCTCATGATACACGACGGAAAGGACGCTAATGCAC
TTCCCGTTTTGCAAGAAATGCTGTTATCTGGTGAAAATGACATTGTATTATACGAAGTGGCACTTATAATGTTTAGGGCC
GGGCGCATTCATGAGAGCGAGGGACTTCTGAATCGTGCTCTGTTGGTCAACTCGCAAAACGGCATGGTTTACCTGGCGCT
GGTGCAACTTTTGGCCGGCGGCGGCAGGTATGCCGAGGCGATCGCCCTGGTTGAACGGATGCAGGCAGAAGACGTGATGG
CGGACCAGGCGCAGTTCATACTGGGCGAGCTCTACGAGACGACGGGGGACGAGGCGAAGGCGATCGAGATGTGGTCGAAG
GCGCTGGAGATGCCGACCGTGGCGCGCGCAGCCGCCGAGAAGCTGGTCCCGATCCTGGGAAGCCAGGGACGTACCGAGGA
AGTCAAATACCTAGCCAAAAAGTACTTAAAAGGATGCTGCTAA

Upstream 100 bases:

>100_bases
GGACATGTTCCCGCAGACCTACCACCTGGAGAGCGTGACCGAACTGATTCGGGATTGAAATACAAAATAAATACAAATTT
AAGTAAAGGCGGAGGGCCTC

Downstream 100 bases:

>100_bases
CGTAAATACGGTTCTCCGGAGGTGCACAATGAACAAATCGGAACTCATTGAATCTCTCGCCGCAAAGAAAACCCTCTCCT
TCAAGAAGGCCGAGGAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MLFGLFKKKDHRYYQTQGAKFLAAERYADARVDFLEALRLCPADAANDQGEIRQGLDHSGNRLGELNLEEGEHSLNQGEL
QKAFDHFTLAGELAADQGIKAKATAGLARVQQGDAPQSAPVAAAAAPTAAAAPAKEVAGPYKPHGGGSCTSCGTHAHHKP
LEAEPAGFDLAEEDQFHLMVAPLPGDLPARYGAMGSKFAQAYLMIHDGKDANALPVLQEMLLSGENDIVLYEVALIMFRA
GRIHESEGLLNRALLVNSQNGMVYLALVQLLAGGGRYAEAIALVERMQAEDVMADQAQFILGELYETTGDEAKAIEMWSK
ALEMPTVARAAAEKLVPILGSQGRTEEVKYLAKKYLKGCC

Sequences:

>Translated_360_residues
MLFGLFKKKDHRYYQTQGAKFLAAERYADARVDFLEALRLCPADAANDQGEIRQGLDHSGNRLGELNLEEGEHSLNQGEL
QKAFDHFTLAGELAADQGIKAKATAGLARVQQGDAPQSAPVAAAAAPTAAAAPAKEVAGPYKPHGGGSCTSCGTHAHHKP
LEAEPAGFDLAEEDQFHLMVAPLPGDLPARYGAMGSKFAQAYLMIHDGKDANALPVLQEMLLSGENDIVLYEVALIMFRA
GRIHESEGLLNRALLVNSQNGMVYLALVQLLAGGGRYAEAIALVERMQAEDVMADQAQFILGELYETTGDEAKAIEMWSK
ALEMPTVARAAAEKLVPILGSQGRTEEVKYLAKKYLKGCC
>Mature_360_residues
MLFGLFKKKDHRYYQTQGAKFLAAERYADARVDFLEALRLCPADAANDQGEIRQGLDHSGNRLGELNLEEGEHSLNQGEL
QKAFDHFTLAGELAADQGIKAKATAGLARVQQGDAPQSAPVAAAAAPTAAAAPAKEVAGPYKPHGGGSCTSCGTHAHHKP
LEAEPAGFDLAEEDQFHLMVAPLPGDLPARYGAMGSKFAQAYLMIHDGKDANALPVLQEMLLSGENDIVLYEVALIMFRA
GRIHESEGLLNRALLVNSQNGMVYLALVQLLAGGGRYAEAIALVERMQAEDVMADQAQFILGELYETTGDEAKAIEMWSK
ALEMPTVARAAAEKLVPILGSQGRTEEVKYLAKKYLKGCC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38647; Mature: 38647

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFGLFKKKDHRYYQTQGAKFLAAERYADARVDFLEALRLCPADAANDQGEIRQGLDHSG
CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC
NRLGELNLEEGEHSLNQGELQKAFDHFTLAGELAADQGIKAKATAGLARVQQGDAPQSAP
CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
VAAAAAPTAAAAPAKEVAGPYKPHGGGSCTSCGTHAHHKPLEAEPAGFDLAEEDQFHLMV
CHHHCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
APLPGDLPARYGAMGSKFAQAYLMIHDGKDANALPVLQEMLLSGENDIVLYEVALIMFRA
ECCCCCCCHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHC
GRIHESEGLLNRALLVNSQNGMVYLALVQLLAGGGRYAEAIALVERMQAEDVMADQAQFI
CCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGELYETTGDEAKAIEMWSKALEMPTVARAAAEKLVPILGSQGRTEEVKYLAKKYLKGCC
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFGLFKKKDHRYYQTQGAKFLAAERYADARVDFLEALRLCPADAANDQGEIRQGLDHSG
CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC
NRLGELNLEEGEHSLNQGELQKAFDHFTLAGELAADQGIKAKATAGLARVQQGDAPQSAP
CCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
VAAAAAPTAAAAPAKEVAGPYKPHGGGSCTSCGTHAHHKPLEAEPAGFDLAEEDQFHLMV
CHHHCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
APLPGDLPARYGAMGSKFAQAYLMIHDGKDANALPVLQEMLLSGENDIVLYEVALIMFRA
ECCCCCCCHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHC
GRIHESEGLLNRALLVNSQNGMVYLALVQLLAGGGRYAEAIALVERMQAEDVMADQAQFI
CCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGELYETTGDEAKAIEMWSKALEMPTVARAAAEKLVPILGSQGRTEEVKYLAKKYLKGCC
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA