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The map label for this gene is 197118428

Identifier: 197118428

GI number: 197118428

Start: 2353998

End: 2355941

Strand: Reverse

Name: 197118428

Synonym: Gbem_2046

Alternate gene names: NA

Gene position: 2355941-2353998 (Counterclockwise)

Preceding gene: 197118429

Following gene: 197118426

Centisome position: 51.05

GC content: 60.08

Gene sequence:

>1944_bases
ATGATGGATGCGCCGCTGTACAACAGCAGGATCACGGATACGTACATAAAGCTGATCAAGAACAAGTACAGCTTTGTCAA
CATCACGGAACTGCTCGACTACGCAGGCATGAGCCCGTACGAGGTGGCCGACCAGGGGCACTGGTTCACCCAGGAGCAGG
TGAACCGCTTCCACGAACGGCTCCTGAAGCTTACCGGCAACGAGAACCTCGCCCGCGAGGCCGGGCGCTACGCCGCCTCC
CCCGATGCGATCGGAATGATGAGGCAGTATTTCCTGGGACTGGTCGGCCCCGCTAAGGCCTACGAGATGATCGGCAAGGC
GACCAACAACAACTTCGTCCGCTCCTCCGTCTACACCTCCAGGAAACTAGCCGCCAACAAGGTGGAGATCACCGTCACCC
CGCGCCCCGGCACTAAGGAGCAGCCCTTCCAGTGCCAGAACCGGATCGGCTTCTTCGAGGCCGTGGCCGCAGCCTTCGAC
GTGAAGCTTCCCCGCATCGAACACCCCGAGTGCATATTCCAGGGGGGGCAGGAATGCCGCTATATCGTCTCCTGGGAGAA
ATCGAGCCATACTTTCTGGGAATCCACGCGGAATTACGCAGTACTCGCCCTCTCCCTGCTGTCGGCCATCTCCATCGCCA
TCAGTCCGCATCAGGGGTTGGAGAGGGTGCTGCCGGCGTCTGCCATAACGGTGCTGCTTTTGAGCGTCATCGCGCTCAAC
GGCGAGAAAAAGGCGCTCCTCGCCGGCCAGTTGAACCTGAAGGACCTCTCCGACAACCTGTTCAAGCAGCTCGAGCTCAA
CTACAACAACGCCCTCGTCACCAACGAGATCGGCCAGGTGATCAGCAAGCAGACCCGCCTCCACGACATCCTCGCCAACG
TCGTCCTCGTGCTGGAGAAGCGCCTCGACTACAGCCGCGGCCTGATCCTTCTGACCAACCAGGAGAAGACCAAACTGGTC
TTTCACGCCGGCTTCGGCTATTTCGACGAACAGTTGAGCTTCCTCAGCAAGACCACCTTCCAGCTGGACCGCCCGGAGGC
TAAGGGCGTGTTCGTGGTCTCCTACCGCGAGCAGCGCCCGTTTCTCGTGGGGGACATCAACGAGATCGGCGGCAACCTGT
CGGGGAAGAGCCAGAACTTCGCCAAGCAGCTCCTGTCGCAGACCTTCATCTGCTGCCCCATCATCTGCGAGGGCGAATCG
CTCGGCATCATCGCCGTCGACAACCTGAAGTCGAAGCGCCCCCTGGTGCAAAGCGACATGACGCTCCTGATGAGCATCGC
CCCGGTCATCGGCATCGCGATTCACAACGCGAACCTGCACGAGGCGAAGTCGACCCAGTTCAGCTCCTTTTTGAAGGTCA
TGGCAGCCTCCATCGACGCCAGGGATCCTCTCACCGCCGGGCACTCCGAGAAAGTCACCGAGTACTGCGAGGAGATCTGC
CATGAACTGGGACTCCCCGAGGACGAGGTGGAGATGATCAGGGTCGCGGCCCTTTTGCACGACTACGGCAAGATCGGCGT
TCCCGACGCCATCCTCAAGAAAAACGGCAGGCTCTCCGACCTGGAGTACGAGATCGTCAAGACGCATTGCCACAAGACCA
GGGACATTTTGGAGCAGGTCAACTTCGAGGGGATTTACCGGCAGGTTCCCGAGATAGCCGGCGCGCACCACGAAAAGATC
GATGGCACCGGCTATCCGAAAGGGTTGAAGGGAAAAGACATACCGTTGGGAGCGAAGATCATCGCCGTCGCCGATTTTTA
CGAGGCCGTGACCTCGCAGCGTCACTACCGGGACCCCATGCCGATGGAAGAAGCCTTCCGGCTGTTAAGGGAAGGGAGCG
GGTCGCACTTCGAAAGGCATATCGTGGAAGCCTTCATCAACTGCCGCAAGCGCGGGGCAGACGAGGAAGGCGAGGTCCGC
GCGATTCAACCCTTTCCGGCATGA

Upstream 100 bases:

>100_bases
GGCACCAAGTTCCTGAAGTACCTGACCACGCTCGTCACCAGGAACAAGAGCAAAAAACATACAGCTGAAGCATTGGCCCA
GTGAGGCAAGGATCGCGAAA

Downstream 100 bases:

>100_bases
CCCCACCTGCTGGGGGCTGGGGGCTAGAACATGGGGTTAGGGGTTAGGGCTTCCGTCCCCTCACCGCGATGATGGGAGTA
TAGGTGAACCTGCGCGGATG

Product: sensor cyclic diguanylate phosphodiesterase, GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 647; Mature: 647

Protein sequence:

>647_residues
MMDAPLYNSRITDTYIKLIKNKYSFVNITELLDYAGMSPYEVADQGHWFTQEQVNRFHERLLKLTGNENLAREAGRYAAS
PDAIGMMRQYFLGLVGPAKAYEMIGKATNNNFVRSSVYTSRKLAANKVEITVTPRPGTKEQPFQCQNRIGFFEAVAAAFD
VKLPRIEHPECIFQGGQECRYIVSWEKSSHTFWESTRNYAVLALSLLSAISIAISPHQGLERVLPASAITVLLLSVIALN
GEKKALLAGQLNLKDLSDNLFKQLELNYNNALVTNEIGQVISKQTRLHDILANVVLVLEKRLDYSRGLILLTNQEKTKLV
FHAGFGYFDEQLSFLSKTTFQLDRPEAKGVFVVSYREQRPFLVGDINEIGGNLSGKSQNFAKQLLSQTFICCPIICEGES
LGIIAVDNLKSKRPLVQSDMTLLMSIAPVIGIAIHNANLHEAKSTQFSSFLKVMAASIDARDPLTAGHSEKVTEYCEEIC
HELGLPEDEVEMIRVAALLHDYGKIGVPDAILKKNGRLSDLEYEIVKTHCHKTRDILEQVNFEGIYRQVPEIAGAHHEKI
DGTGYPKGLKGKDIPLGAKIIAVADFYEAVTSQRHYRDPMPMEEAFRLLREGSGSHFERHIVEAFINCRKRGADEEGEVR
AIQPFPA

Sequences:

>Translated_647_residues
MMDAPLYNSRITDTYIKLIKNKYSFVNITELLDYAGMSPYEVADQGHWFTQEQVNRFHERLLKLTGNENLAREAGRYAAS
PDAIGMMRQYFLGLVGPAKAYEMIGKATNNNFVRSSVYTSRKLAANKVEITVTPRPGTKEQPFQCQNRIGFFEAVAAAFD
VKLPRIEHPECIFQGGQECRYIVSWEKSSHTFWESTRNYAVLALSLLSAISIAISPHQGLERVLPASAITVLLLSVIALN
GEKKALLAGQLNLKDLSDNLFKQLELNYNNALVTNEIGQVISKQTRLHDILANVVLVLEKRLDYSRGLILLTNQEKTKLV
FHAGFGYFDEQLSFLSKTTFQLDRPEAKGVFVVSYREQRPFLVGDINEIGGNLSGKSQNFAKQLLSQTFICCPIICEGES
LGIIAVDNLKSKRPLVQSDMTLLMSIAPVIGIAIHNANLHEAKSTQFSSFLKVMAASIDARDPLTAGHSEKVTEYCEEIC
HELGLPEDEVEMIRVAALLHDYGKIGVPDAILKKNGRLSDLEYEIVKTHCHKTRDILEQVNFEGIYRQVPEIAGAHHEKI
DGTGYPKGLKGKDIPLGAKIIAVADFYEAVTSQRHYRDPMPMEEAFRLLREGSGSHFERHIVEAFINCRKRGADEEGEVR
AIQPFPA
>Mature_647_residues
MMDAPLYNSRITDTYIKLIKNKYSFVNITELLDYAGMSPYEVADQGHWFTQEQVNRFHERLLKLTGNENLAREAGRYAAS
PDAIGMMRQYFLGLVGPAKAYEMIGKATNNNFVRSSVYTSRKLAANKVEITVTPRPGTKEQPFQCQNRIGFFEAVAAAFD
VKLPRIEHPECIFQGGQECRYIVSWEKSSHTFWESTRNYAVLALSLLSAISIAISPHQGLERVLPASAITVLLLSVIALN
GEKKALLAGQLNLKDLSDNLFKQLELNYNNALVTNEIGQVISKQTRLHDILANVVLVLEKRLDYSRGLILLTNQEKTKLV
FHAGFGYFDEQLSFLSKTTFQLDRPEAKGVFVVSYREQRPFLVGDINEIGGNLSGKSQNFAKQLLSQTFICCPIICEGES
LGIIAVDNLKSKRPLVQSDMTLLMSIAPVIGIAIHNANLHEAKSTQFSSFLKVMAASIDARDPLTAGHSEKVTEYCEEIC
HELGLPEDEVEMIRVAALLHDYGKIGVPDAILKKNGRLSDLEYEIVKTHCHKTRDILEQVNFEGIYRQVPEIAGAHHEKI
DGTGYPKGLKGKDIPLGAKIIAVADFYEAVTSQRHYRDPMPMEEAFRLLREGSGSHFERHIVEAFINCRKRGADEEGEVR
AIQPFPA

Specific function: Unknown

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72440; Mature: 72440

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDAPLYNSRITDTYIKLIKNKYSFVNITELLDYAGMSPYEVADQGHWFTQEQVNRFHER
CCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHH
LLKLTGNENLAREAGRYAASPDAIGMMRQYFLGLVGPAKAYEMIGKATNNNFVRSSVYTS
HHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEHHHHHHH
RKLAANKVEITVTPRPGTKEQPFQCQNRIGFFEAVAAAFDVKLPRIEHPECIFQGGQECR
HHHCCCEEEEEEECCCCCCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCE
YIVSWEKSSHTFWESTRNYAVLALSLLSAISIAISPHQGLERVLPASAITVLLLSVIALN
EEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCC
GEKKALLAGQLNLKDLSDNLFKQLELNYNNALVTNEIGQVISKQTRLHDILANVVLVLEK
CCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDYSRGLILLTNQEKTKLVFHAGFGYFDEQLSFLSKTTFQLDRPEAKGVFVVSYREQRP
HCCCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCC
FLVGDINEIGGNLSGKSQNFAKQLLSQTFICCPIICEGESLGIIAVDNLKSKRPLVQSDM
EEEECHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHH
TLLMSIAPVIGIAIHNANLHEAKSTQFSSFLKVMAASIDARDPLTAGHSEKVTEYCEEIC
HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
HELGLPEDEVEMIRVAALLHDYGKIGVPDAILKKNGRLSDLEYEIVKTHCHKTRDILEQV
HHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
NFEGIYRQVPEIAGAHHEKIDGTGYPKGLKGKDIPLGAKIIAVADFYEAVTSQRHYRDPM
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PMEEAFRLLREGSGSHFERHIVEAFINCRKRGADEEGEVRAIQPFPA
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MMDAPLYNSRITDTYIKLIKNKYSFVNITELLDYAGMSPYEVADQGHWFTQEQVNRFHER
CCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHH
LLKLTGNENLAREAGRYAASPDAIGMMRQYFLGLVGPAKAYEMIGKATNNNFVRSSVYTS
HHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEHHHHHHH
RKLAANKVEITVTPRPGTKEQPFQCQNRIGFFEAVAAAFDVKLPRIEHPECIFQGGQECR
HHHCCCEEEEEEECCCCCCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCE
YIVSWEKSSHTFWESTRNYAVLALSLLSAISIAISPHQGLERVLPASAITVLLLSVIALN
EEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCC
GEKKALLAGQLNLKDLSDNLFKQLELNYNNALVTNEIGQVISKQTRLHDILANVVLVLEK
CCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDYSRGLILLTNQEKTKLVFHAGFGYFDEQLSFLSKTTFQLDRPEAKGVFVVSYREQRP
HCCCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCC
FLVGDINEIGGNLSGKSQNFAKQLLSQTFICCPIICEGESLGIIAVDNLKSKRPLVQSDM
EEEECHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHH
TLLMSIAPVIGIAIHNANLHEAKSTQFSSFLKVMAASIDARDPLTAGHSEKVTEYCEEIC
HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
HELGLPEDEVEMIRVAALLHDYGKIGVPDAILKKNGRLSDLEYEIVKTHCHKTRDILEQV
HHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
NFEGIYRQVPEIAGAHHEKIDGTGYPKGLKGKDIPLGAKIIAVADFYEAVTSQRHYRDPM
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PMEEAFRLLREGSGSHFERHIVEAFINCRKRGADEEGEVRAIQPFPA
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]