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The map label for this gene is rfaQ [H]

Identifier: 197118371

GI number: 197118371

Start: 2293885

End: 2294958

Strand: Direct

Name: rfaQ [H]

Synonym: Gbem_1989

Alternate gene names: 197118371

Gene position: 2293885-2294958 (Clockwise)

Preceding gene: 197118370

Following gene: 197118372

Centisome position: 49.7

GC content: 65.27

Gene sequence:

>1074_bases
TTGAAGGCAACCCTGTTGAAACGACTCGACGCCGCGGTGGGTCCGCTCTTTACCCGGCTCCTTCCCAAGAGGCGTTTGCC
CGACACTCACTTTTCCCCCCGAAGTTTCCTGGTCATCCGTCCCGGCGGCATCGGCGACGCGGTCCTCCTGGTCCCGGCGT
TGTCGGCGCTGCAAAAAGCTTTTCCCGGCTGCCGCATCGACGTTCTCGCCGAAAGCCGCAATGCCGCCGCCTTTCTCATG
TGCCCCGGGCTGAACCGGGTGTACCGCTACGATTCCCTCTCCGACATAACGGCTTTGTTCAGCACCTCTTTCGACGTGGT
GATCGACACCGAGCAGTGGTACCGCCTCTCCGCCGTGATCGCGAGGCTGGTCGGCGCCCTGCGCTCCATCGGGTTTTCAA
CCAACGACCGGGGGAGGCTCTTCACCGACCCCGTGCCTTATCCCTTGCAGGATTACGAACTCATCTCCTTCTTCAAGCTC
CTAGCCCCGCTGGAGGTGCAGCCCCCCAAGGAATCTGCGGCTCCCTTCCTCCAACTCCCCGCCGGGGCGAAGGAAGGGGC
GCGGCGGCTCTTGGCCCCGCTGGCGGGGAAGGCGTTTGTCGCCATTTTCCCCGGAGCTAGCGTACCCGAGAAGCAATGGG
GGAGGGAGAACTTCCGGCAGGTGGCGGAGAGCTTAACCGCGGCGGAGATCGCGGTGGTGGTGGTCGGCGCCGACGACGCC
CGCGCCTCGGGCGACTTCATTGCCCGCGGCGGTCTTGCCCTGAACCTGGCGGGTAAGGGGGGGCTCATGGAAAGCGCCGC
TGTCCTCGCCGAGGCGCGGGTCCTTTTAAGCGGCGACTCAGGGCTTTTGCACATCGCCGCAGGGCTTGGCACCGCGACCG
TTTCGCTTTTCGGCCCCAGCGACGCGGCCAAGTGGGCTCCCAAGGGCGAGCGGCACACGGCATTTTCTTCGTCCCTTTCC
TGTGCTCCCTGTTCCAGGTACGGAACCATCCGCTGCAGCACCGGCGCGCGCTGTCTCGACGCCGCGCCGACTGAAGTGAC
TGCAGCCGTGCTGAGGTTGTGTAAGTGGCGCTAA

Upstream 100 bases:

>100_bases
AAAAAAAGCCGGCGTTGCAAAAAGCCGGCTTTTTCTGTATAGATGAACCCGCTCCGGCCTTATCCAACGGCGCCGGGTTC
TGGTCCTGGAGGGCGCAGTA

Downstream 100 bases:

>100_bases
AACGGACGCTTGCACCGCGGGACCTTTCCGGTGTCGCTGGAATAGTTACTCCAATGAGAAAAATTCGTTTATATCAGACA
AAAAGTGTTGACTTTGTTTT

Product: family glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKATLLKRLDAAVGPLFTRLLPKRRLPDTHFSPRSFLVIRPGGIGDAVLLVPALSALQKAFPGCRIDVLAESRNAAAFLM
CPGLNRVYRYDSLSDITALFSTSFDVVIDTEQWYRLSAVIARLVGALRSIGFSTNDRGRLFTDPVPYPLQDYELISFFKL
LAPLEVQPPKESAAPFLQLPAGAKEGARRLLAPLAGKAFVAIFPGASVPEKQWGRENFRQVAESLTAAEIAVVVVGADDA
RASGDFIARGGLALNLAGKGGLMESAAVLAEARVLLSGDSGLLHIAAGLGTATVSLFGPSDAAKWAPKGERHTAFSSSLS
CAPCSRYGTIRCSTGARCLDAAPTEVTAAVLRLCKWR

Sequences:

>Translated_357_residues
MKATLLKRLDAAVGPLFTRLLPKRRLPDTHFSPRSFLVIRPGGIGDAVLLVPALSALQKAFPGCRIDVLAESRNAAAFLM
CPGLNRVYRYDSLSDITALFSTSFDVVIDTEQWYRLSAVIARLVGALRSIGFSTNDRGRLFTDPVPYPLQDYELISFFKL
LAPLEVQPPKESAAPFLQLPAGAKEGARRLLAPLAGKAFVAIFPGASVPEKQWGRENFRQVAESLTAAEIAVVVVGADDA
RASGDFIARGGLALNLAGKGGLMESAAVLAEARVLLSGDSGLLHIAAGLGTATVSLFGPSDAAKWAPKGERHTAFSSSLS
CAPCSRYGTIRCSTGARCLDAAPTEVTAAVLRLCKWR
>Mature_357_residues
MKATLLKRLDAAVGPLFTRLLPKRRLPDTHFSPRSFLVIRPGGIGDAVLLVPALSALQKAFPGCRIDVLAESRNAAAFLM
CPGLNRVYRYDSLSDITALFSTSFDVVIDTEQWYRLSAVIARLVGALRSIGFSTNDRGRLFTDPVPYPLQDYELISFFKL
LAPLEVQPPKESAAPFLQLPAGAKEGARRLLAPLAGKAFVAIFPGASVPEKQWGRENFRQVAESLTAAEIAVVVVGADDA
RASGDFIARGGLALNLAGKGGLMESAAVLAEARVLLSGDSGLLHIAAGLGTATVSLFGPSDAAKWAPKGERHTAFSSSLS
CAPCSRYGTIRCSTGARCLDAAPTEVTAAVLRLCKWR

Specific function: Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=304, Percent_Identity=23.3552631578947, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011916 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37982; Mature: 37982

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATLLKRLDAAVGPLFTRLLPKRRLPDTHFSPRSFLVIRPGGIGDAVLLVPALSALQKA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
FPGCRIDVLAESRNAAAFLMCPGLNRVYRYDSLSDITALFSTSFDVVIDTEQWYRLSAVI
CCCCEEEEEECCCCCEEEEECCCCCHHHCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHH
ARLVGALRSIGFSTNDRGRLFTDPVPYPLQDYELISFFKLLAPLEVQPPKESAAPFLQLP
HHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCEEECC
AGAKEGARRLLAPLAGKAFVAIFPGASVPEKQWGRENFRQVAESLTAAEIAVVVVGADDA
CCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCHHHHHHHHHHHHHEEEEEEEEECCCC
RASGDFIARGGLALNLAGKGGLMESAAVLAEARVLLSGDSGLLHIAAGLGTATVSLFGPS
CCCCCEEEECCEEEEECCCCCCHHHHHHHHHHEEEEECCCCEEEEEECCCEEEEEEECCC
DAAKWAPKGERHTAFSSSLSCAPCSRYGTIRCSTGARCLDAAPTEVTAAVLRLCKWR
CCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKATLLKRLDAAVGPLFTRLLPKRRLPDTHFSPRSFLVIRPGGIGDAVLLVPALSALQKA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
FPGCRIDVLAESRNAAAFLMCPGLNRVYRYDSLSDITALFSTSFDVVIDTEQWYRLSAVI
CCCCEEEEEECCCCCEEEEECCCCCHHHCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHH
ARLVGALRSIGFSTNDRGRLFTDPVPYPLQDYELISFFKLLAPLEVQPPKESAAPFLQLP
HHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCEEECC
AGAKEGARRLLAPLAGKAFVAIFPGASVPEKQWGRENFRQVAESLTAAEIAVVVVGADDA
CCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCHHHHHHHHHHHHHEEEEEEEEECCCC
RASGDFIARGGLALNLAGKGGLMESAAVLAEARVLLSGDSGLLHIAAGLGTATVSLFGPS
CCCCCEEEECCEEEEECCCCCCHHHHHHHHHHEEEEECCCCEEEEEECCCEEEEEEECCC
DAAKWAPKGERHTAFSSSLSCAPCSRYGTIRCSTGARCLDAAPTEVTAAVLRLCKWR
CCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA