Click here to switch to the map view.

The map label for this gene is yxxF [H]

Identifier: 197118330

GI number: 197118330

Start: 2250479

End: 2251375

Strand: Direct

Name: yxxF [H]

Synonym: Gbem_1947

Alternate gene names: 197118330

Gene position: 2250479-2251375 (Clockwise)

Preceding gene: 197118329

Following gene: 197118331

Centisome position: 48.76

GC content: 62.99

Gene sequence:

>897_bases
GTGTCCGAAACCGTCACCATCAAGCCTTGGATCAACCCCTACCTGGCCATCCTGGTAGGGGTTTTTGCTGTCTCCTTCTC
CGCGATCCTGGTGCGCGTCTGCTCCGCGCCGCCGCTGGTGATAGCCGCGTACAGGCTCATCTTCACCTTCACTTTCCTGG
CGCCGTTCACGCTCTGGGGCGGCGCACCCGCTCTCAGGGGAATGACGAAGCGGCAGGTGCTCCTGTCCGCCGCGAGCGGC
GTCTTCCTCGCCTTTCATTTCGTCACCTGGTTCATCTCGCTCAAATACACCTCCATCGCCAGTTCGGTAGTGCTGGTCAC
CACCCAGCCGCTTTTCGTCGTGCTCGGTTCCTGGATCTTTTTCAAGGAGCGGGTGCCGCGCATGGCGCTTTACGGCGGTG
CGCTCGCCTTTGCCGGGAGCGTCGTCATCGGCGCCACCGACTTCCAGCTGGGAGGTAGCGCCTTCATCGGCGACATGCTT
GCTCTTTTCGCCGCCGTGATGGTCTCAGGCTACCTTTTGATCGGGAGAAGACTCAGGGGGGATGTCCCCCTTACCGGCTA
CACCTTCGTCACCTACGGGTCCAGTGCAGCTGTGCTGACCGCGACCGCTCTGGCCGCACGCTTTCCCATGTATCCCCATC
CTGCCCAGGACTGGCTCATCTTCGTGGCGCTGGCTCTGGTCTGCACCATCCTGGGGCACACCGTATTTAACTGGGTGCTC
CGGTATGTGCAGGCTTCCGTGGTTTCGGTGAGCGTTCTTGGCGAACCGCTGGGGGCGATCCTTTGGGCCGCCGTCTTCCT
GGGCGAGAACCCGACCCCGCGCCAGGCCGTGGGGGGTGCCATCATCTTCTCCGGGCTCTACCTTTTCACCAGGGTGACGG
CGAGAGGCAGGGGCTAG

Upstream 100 bases:

>100_bases
CGCGCCTACGTCCTCGAGACTGGCGAGGTCGTGCTGCAGGGGGACGCCAAGGAACTTGCCTCCAACCCCGAGGTGAGGAA
GGCGTACCTGGGAGAGTAGG

Downstream 100 bases:

>100_bases
GGGCTAAAAGCAGGGGCTAGGGGCTAAAAGCTGGGGCTAGGGGCTGGGGGCTTTTGAAACTATGCGACAGGAGGCTGGTA
TGGATTCCAATTTGAGCGCA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSETVTIKPWINPYLAILVGVFAVSFSAILVRVCSAPPLVIAAYRLIFTFTFLAPFTLWGGAPALRGMTKRQVLLSAASG
VFLAFHFVTWFISLKYTSIASSVVLVTTQPLFVVLGSWIFFKERVPRMALYGGALAFAGSVVIGATDFQLGGSAFIGDML
ALFAAVMVSGYLLIGRRLRGDVPLTGYTFVTYGSSAAVLTATALAARFPMYPHPAQDWLIFVALALVCTILGHTVFNWVL
RYVQASVVSVSVLGEPLGAILWAAVFLGENPTPRQAVGGAIIFSGLYLFTRVTARGRG

Sequences:

>Translated_298_residues
MSETVTIKPWINPYLAILVGVFAVSFSAILVRVCSAPPLVIAAYRLIFTFTFLAPFTLWGGAPALRGMTKRQVLLSAASG
VFLAFHFVTWFISLKYTSIASSVVLVTTQPLFVVLGSWIFFKERVPRMALYGGALAFAGSVVIGATDFQLGGSAFIGDML
ALFAAVMVSGYLLIGRRLRGDVPLTGYTFVTYGSSAAVLTATALAARFPMYPHPAQDWLIFVALALVCTILGHTVFNWVL
RYVQASVVSVSVLGEPLGAILWAAVFLGENPTPRQAVGGAIIFSGLYLFTRVTARGRG
>Mature_297_residues
SETVTIKPWINPYLAILVGVFAVSFSAILVRVCSAPPLVIAAYRLIFTFTFLAPFTLWGGAPALRGMTKRQVLLSAASGV
FLAFHFVTWFISLKYTSIASSVVLVTTQPLFVVLGSWIFFKERVPRMALYGGALAFAGSVVIGATDFQLGGSAFIGDMLA
LFAAVMVSGYLLIGRRLRGDVPLTGYTFVTYGSSAAVLTATALAARFPMYPHPAQDWLIFVALALVCTILGHTVFNWVLR
YVQASVVSVSVLGEPLGAILWAAVFLGENPTPRQAVGGAIIFSGLYLFTRVTARGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31977; Mature: 31846

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETVTIKPWINPYLAILVGVFAVSFSAILVRVCSAPPLVIAAYRLIFTFTFLAPFTLWG
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
GAPALRGMTKRQVLLSAASGVFLAFHFVTWFISLKYTSIASSVVLVTTQPLFVVLGSWIF
CCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHH
FKERVPRMALYGGALAFAGSVVIGATDFQLGGSAFIGDMLALFAAVMVSGYLLIGRRLRG
HHHCCCHHHHHCCHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DVPLTGYTFVTYGSSAAVLTATALAARFPMYPHPAQDWLIFVALALVCTILGHTVFNWVL
CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVQASVVSVSVLGEPLGAILWAAVFLGENPTPRQAVGGAIIFSGLYLFTRVTARGRG
HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SETVTIKPWINPYLAILVGVFAVSFSAILVRVCSAPPLVIAAYRLIFTFTFLAPFTLWG
CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
GAPALRGMTKRQVLLSAASGVFLAFHFVTWFISLKYTSIASSVVLVTTQPLFVVLGSWIF
CCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHH
FKERVPRMALYGGALAFAGSVVIGATDFQLGGSAFIGDMLALFAAVMVSGYLLIGRRLRG
HHHCCCHHHHHCCHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DVPLTGYTFVTYGSSAAVLTATALAARFPMYPHPAQDWLIFVALALVCTILGHTVFNWVL
CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVQASVVSVSVLGEPLGAILWAAVFLGENPTPRQAVGGAIIFSGLYLFTRVTARGRG
HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377; 8316082 [H]