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The map label for this gene is ygdQ [C]

Identifier: 197118319

GI number: 197118319

Start: 2238276

End: 2239028

Strand: Direct

Name: ygdQ [C]

Synonym: Gbem_1936

Alternate gene names: 197118319

Gene position: 2238276-2239028 (Clockwise)

Preceding gene: 197118318

Following gene: 197118320

Centisome position: 48.5

GC content: 57.9

Gene sequence:

>753_bases
ATGGAATGGCTTACCGACCCGCAGGTCTGGCTGGCACTGGTTACCCTGAGCGCACTTGAGATAGTGCTGGGTATAGACAA
CATCATCTTCATCTCGATTCAGGCCAGCAAACTCCCGGCCCACCAGCAGGAAAAGGCGAGGCTTACCGGCCTCGGTTTGG
CGATGTTCATCAGGGTGGCGCTTCTTTTTTCGCTTTCCTGGCTCATGGGGCTCACCGACCCGCTCTTCTCGGTCCTTAAC
AACGAGATCTCCGGCCGCGACCTCATCCTCATCTCGGGCGGCTTGTTCCTCATCTGGAAGAGCACTATGGAGATTCACGA
GAAACTGGAGGGAGAGGAGGTGGTCGCCTCCGCCAAGGTGGGAGCGACCTTCGGGGCGGTTCTGGTGCAAATCCTGCTGC
TGGATATCGTTTTTTCGCTCGACTCCATCATCACCGCCATCGGCATGGCGAGCCAGCTCTTCATAATGATCGCCGCGGTG
GTGATCGCCGTCGGCTTCATGATGCTCTTCTCCGGCAAGATCAGCGCCTTCGTGGAAAAACACCCCACCATAAAGATGCT
CGCGCTGAGCTTCCTGCTCATGATCGGTGTCGCCTTGATCGGGGACGGGTTGGACATGCACATCCCCAAAGGGTACATCT
ACTTCGCCATGGCCTTCTCGGTGCTGGTCGAGATGCTCAACCTGAGGATGCGCAGGGGCACGCCGGTCAAACTCCACGAG
CCGCACCTCGATTCGGCGGAGAAGGGAAAGTAA

Upstream 100 bases:

>100_bases
CGCAAGGGGAGGGGGAGAGTTGGCGGCCTCTGGGAGCGAGGGTGAGGCGCACCTGCAGCGGCTTGCACTTCCTAAGTTCA
AGCATTAAGGAGAGATTTAA

Downstream 100 bases:

>100_bases
CTACAACTTGCAACAGGCCCCCGCGAAGGCAGGAAGGGCAGGGGGGGACTTGCCAGCAGCTCAAAGGTGGCACCTACCCC
CACCCCCTGCCCCCCTCCCG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MEWLTDPQVWLALVTLSALEIVLGIDNIIFISIQASKLPAHQQEKARLTGLGLAMFIRVALLFSLSWLMGLTDPLFSVLN
NEISGRDLILISGGLFLIWKSTMEIHEKLEGEEVVASAKVGATFGAVLVQILLLDIVFSLDSIITAIGMASQLFIMIAAV
VIAVGFMMLFSGKISAFVEKHPTIKMLALSFLLMIGVALIGDGLDMHIPKGYIYFAMAFSVLVEMLNLRMRRGTPVKLHE
PHLDSAEKGK

Sequences:

>Translated_250_residues
MEWLTDPQVWLALVTLSALEIVLGIDNIIFISIQASKLPAHQQEKARLTGLGLAMFIRVALLFSLSWLMGLTDPLFSVLN
NEISGRDLILISGGLFLIWKSTMEIHEKLEGEEVVASAKVGATFGAVLVQILLLDIVFSLDSIITAIGMASQLFIMIAAV
VIAVGFMMLFSGKISAFVEKHPTIKMLALSFLLMIGVALIGDGLDMHIPKGYIYFAMAFSVLVEMLNLRMRRGTPVKLHE
PHLDSAEKGK
>Mature_250_residues
MEWLTDPQVWLALVTLSALEIVLGIDNIIFISIQASKLPAHQQEKARLTGLGLAMFIRVALLFSLSWLMGLTDPLFSVLN
NEISGRDLILISGGLFLIWKSTMEIHEKLEGEEVVASAKVGATFGAVLVQILLLDIVFSLDSIITAIGMASQLFIMIAAV
VIAVGFMMLFSGKISAFVEKHPTIKMLALSFLLMIGVALIGDGLDMHIPKGYIYFAMAFSVLVEMLNLRMRRGTPVKLHE
PHLDSAEKGK

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=234, Percent_Identity=58.5470085470086, Blast_Score=256, Evalue=1e-69,
Organism=Escherichia coli, GI1788119, Length=234, Percent_Identity=51.7094017094017, Blast_Score=243, Evalue=7e-66,
Organism=Escherichia coli, GI87082033, Length=228, Percent_Identity=52.6315789473684, Blast_Score=231, Evalue=3e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 27381; Mature: 27381

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWLTDPQVWLALVTLSALEIVLGIDNIIFISIQASKLPAHQQEKARLTGLGLAMFIRVA
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
LLFSLSWLMGLTDPLFSVLNNEISGRDLILISGGLFLIWKSTMEIHEKLEGEEVVASAKV
HHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCEEEEHHHHHHHHHHCCCHHHHHHHHH
GATFGAVLVQILLLDIVFSLDSIITAIGMASQLFIMIAAVVIAVGFMMLFSGKISAFVEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC
HPTIKMLALSFLLMIGVALIGDGLDMHIPKGYIYFAMAFSVLVEMLNLRMRRGTPVKLHE
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
PHLDSAEKGK
CCCCCCCCCC
>Mature Secondary Structure
MEWLTDPQVWLALVTLSALEIVLGIDNIIFISIQASKLPAHQQEKARLTGLGLAMFIRVA
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
LLFSLSWLMGLTDPLFSVLNNEISGRDLILISGGLFLIWKSTMEIHEKLEGEEVVASAKV
HHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEECCEEEEHHHHHHHHHHCCCHHHHHHHHH
GATFGAVLVQILLLDIVFSLDSIITAIGMASQLFIMIAAVVIAVGFMMLFSGKISAFVEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC
HPTIKMLALSFLLMIGVALIGDGLDMHIPKGYIYFAMAFSVLVEMLNLRMRRGTPVKLHE
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
PHLDSAEKGK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]