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The map label for this gene is glnD [H]

Identifier: 197118260

GI number: 197118260

Start: 2170514

End: 2173198

Strand: Direct

Name: glnD [H]

Synonym: Gbem_1877

Alternate gene names: 197118260

Gene position: 2170514-2173198 (Clockwise)

Preceding gene: 197118259

Following gene: 197118261

Centisome position: 47.03

GC content: 61.79

Gene sequence:

>2685_bases
ATGCGCCTGAACATCAACGCATACCTCTCCGAGTCGCTCAAAGGCGACGGCAAGAGCTTCGAGGAGAAGCGCGGCGCCTA
CTTCGCGGCTGCGCGCGAGTTCCTGGAACACTTCAGGGAGGAGTCCAAGCGCGGGCATCGCGAGGGGGAGGACGGCATCT
CAGTGGTGCAGTCGATCACGGCGATGACCGACGCCCTGGTGGTCCGGCTTTTCACGGCGCTCTCCGACGACCTGCAGATG
CATAAGACCGGGCAGCTTGCGCTGGTGGCGGTCGGGGGGTACGGCCGGCGCGAGCTGAACCCTTACTCAGACCTCGACCT
GATGTTTCTCTACAGCGGCAAGGAGTCCAAGGTGGTGGAGGAGGCGGCCAACCGTCTGCTCTATTTCCTGTGGGACCTGC
GCCTGGACGTCGGCTACTCGGTGCGCACCCTTTCTGACTGCGTCGAGATGGCGGGGGGGGACCTGACCGTCAAGACGGCG
CTTCTGGACGCGCGCCTTCTGACCGGGAGCGAGCAGCTCTACAACGACCTGAAGAAGCTGATGGTGACCCAGGTGCTCTC
CAAGAGAAGCGACTCCTTCATCTCGGCGAAGCTCGACGAGCTCAAGAAGCGGCGCGAGAAGTACGGCTCCAGCGTCTATA
TCCTGGAACCCAACATCAAGGAAGGGGAGGGGTGCCTGCGCGACCTGCATACTGCGATGTGGGTGGCGAAGATCAAATAC
AAGGTGGACGAGCCGCGCGAGCTGGTGATCAAGGGGGTGCTTTCCGAGGAGGAGCTGGGGCTTTACTACAGCTCGCTCAA
CTACCTCTGGCGCATCAGAAACGAGCTCCACTACTTGGCCGGCAGGAAGAACGACCAGCTTACCTTCGATGCGCAGACCT
CCATCGCCCGTTTCTTCGGCTATGAAGACAGCGGCAAGACCCTGGCGGTCGAGCAGTTCATGCAGGACTTCTACCTGCAC
GCCAACCGCGTCGAGCATTTCTCGTCTTTATTGATTACCAAGTGCACCCAGCGCGACGAAGGCAAGCGCAAGATCCTGGG
ATACTTCACCCGCAGGCCGGTAGGCGACGGCTGCTACGTGGTGAAGGGCGAGCTGGTGGTCCCCGACGAGTCGGTGATCG
CCAAGGAGCCGGTCCGCCTGATGCGGATCTTCGAGCATGCCCAGAAGCAGGGGGTTACGCTGGCCCTTGGGACCAAGCGG
CTGGTGCGGGACAATCTGGACCTGGTGAACGACAAGTTCCGCCGTTCCAAGGAGGCCGGCACCTCCTTCGTCAATATCCT
GCAGTCCGAGAAGGGGCTTGCCGAGACCCTGCAGCAGATGCACCACCTGGGATTTTTGAACCGTTTCATCCCGGAGTTCG
AGCGGATCTACTGCAAGGTGCAGCACGACGCCTACCACATCTATACGGTCGATACCCACACGCTCTTCGCCGTCGAGGAG
ATCGTCAAGCTGTGTCGCGGCGACCACGCGGATACCCTGCCGCTTTTGACCCAGCTCGCCCGGGAAGTGGACAAGCGCTG
GCTGCTGATACTGGCGGTGATGCTCCACGACATCGGGAAAGGTGGCGGGGGCGGCCACGCCGAGATCGGGGCCGAGCTCT
CCAAGACCATCGCCAGGCGGCTGGGGCTTACCCGCGAGGACACCGAGAGGCTGCAGTTCCTGGTACGGCACCATCTGCTA
TTGGCCCACATAGCCCAGCGGCGCGACCTGCACGACGAGAGGATGATCATCCAGTTTGCCCGCCAGATGGAGAAGAGCGA
GAACCTGAAGATGCTTTATCTCCTCACCTACGCGGACATCAAGGCGGTGGGGCCCGAGGTTTGGACCGAGTGGAAGGCGC
TTCTCTTGCAGGAGCTCTACGATAAGGCGTTCCGGGTGCTGGAGCGCGGCGACTTCAAGCTGGAGGCCTCCGGAGACCGG
GTGCGCCGGGTGAAAAAGACCGTCTTCGAACTTCTGGCCGACGACTACCCGGGCCAATTGGTCAAGGACGAGCTGCAGGC
GCTCTCCACCAGACATCTCCTTTCCTATTCCCCCGAGATCATCGCGGCGCACGTCCGGACGCTTTTGAGGCTCCCGAAGG
AACAGATGGTGGTCCAGCTCGCTCACGAGGTGGACAAGGGGTACACCAACTGCACCGTCTGCACCTACGACATTCCCGGT
CTTTTCTCCATGATCACCGGTGTCGTTGCCGCCAACGGCATGAACATCCTCGGCGCCCAGATCCACACCAACACCAACGA
GAAGGTGCTGGACATCCTCCAGGTCGGCTCCCCCCAGGGGTTCGTCATCACCGAGGAGAGCCGCTGGACCCGTTTCCAGA
ACGATCTCAGGCAGGTGCTGGAAGGGAAGGTGAAGGTGAGCGCCCTGGTGGCGAAGAGGCACCGCCCGAGCATCCTGTCC
GAGAAGGCCAAGCCGACCGTGCCGGCGCGGGTGGAGATCGACAACGAGGTTTCCTCCGACTACACGGTCATCGACATCTA
CGCCCACGACAAGATCGGGCTTTTGTACGGCATCACCAGCACCCTGACCCGGCTCGGGCTCTACATCGGCGTCTCCAAGA
TCTCCACCAAGGTGGATCAGGTCGCCGACGTCTTCTACGTGAAGGACATCTTCGGGCAGAAGATCATGAACCCCGGCAAG
CTTGAGGAGATCCGCAAGGAGCTCCTCGACGCAGTCGACGGCTAG

Upstream 100 bases:

>100_bases
TCATCATCGGCGTGATCGGCGACACGGAGAGCATACCGGAGGCGGAGATAGCGGCGTTCCCTGGCGTGCTGCAGGTGGTC
CGTATCGCCAAGGAAGAGTG

Downstream 100 bases:

>100_bases
TGGACCGCTACCTCGATCTTTTTCTGAACTACCTCCTGGTGGAGAAGGGGGCGGCGGCGAACACGGTCTCCGCGTACAGC
CGCGACCTGAACCGTTATCT

Product: GlnB (protein PII) uridylyltransferase, GlnD

Products: NA

Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]

Number of amino acids: Translated: 894; Mature: 894

Protein sequence:

>894_residues
MRLNINAYLSESLKGDGKSFEEKRGAYFAAAREFLEHFREESKRGHREGEDGISVVQSITAMTDALVVRLFTALSDDLQM
HKTGQLALVAVGGYGRRELNPYSDLDLMFLYSGKESKVVEEAANRLLYFLWDLRLDVGYSVRTLSDCVEMAGGDLTVKTA
LLDARLLTGSEQLYNDLKKLMVTQVLSKRSDSFISAKLDELKKRREKYGSSVYILEPNIKEGEGCLRDLHTAMWVAKIKY
KVDEPRELVIKGVLSEEELGLYYSSLNYLWRIRNELHYLAGRKNDQLTFDAQTSIARFFGYEDSGKTLAVEQFMQDFYLH
ANRVEHFSSLLITKCTQRDEGKRKILGYFTRRPVGDGCYVVKGELVVPDESVIAKEPVRLMRIFEHAQKQGVTLALGTKR
LVRDNLDLVNDKFRRSKEAGTSFVNILQSEKGLAETLQQMHHLGFLNRFIPEFERIYCKVQHDAYHIYTVDTHTLFAVEE
IVKLCRGDHADTLPLLTQLAREVDKRWLLILAVMLHDIGKGGGGGHAEIGAELSKTIARRLGLTREDTERLQFLVRHHLL
LAHIAQRRDLHDERMIIQFARQMEKSENLKMLYLLTYADIKAVGPEVWTEWKALLLQELYDKAFRVLERGDFKLEASGDR
VRRVKKTVFELLADDYPGQLVKDELQALSTRHLLSYSPEIIAAHVRTLLRLPKEQMVVQLAHEVDKGYTNCTVCTYDIPG
LFSMITGVVAANGMNILGAQIHTNTNEKVLDILQVGSPQGFVITEESRWTRFQNDLRQVLEGKVKVSALVAKRHRPSILS
EKAKPTVPARVEIDNEVSSDYTVIDIYAHDKIGLLYGITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQKIMNPGK
LEEIRKELLDAVDG

Sequences:

>Translated_894_residues
MRLNINAYLSESLKGDGKSFEEKRGAYFAAAREFLEHFREESKRGHREGEDGISVVQSITAMTDALVVRLFTALSDDLQM
HKTGQLALVAVGGYGRRELNPYSDLDLMFLYSGKESKVVEEAANRLLYFLWDLRLDVGYSVRTLSDCVEMAGGDLTVKTA
LLDARLLTGSEQLYNDLKKLMVTQVLSKRSDSFISAKLDELKKRREKYGSSVYILEPNIKEGEGCLRDLHTAMWVAKIKY
KVDEPRELVIKGVLSEEELGLYYSSLNYLWRIRNELHYLAGRKNDQLTFDAQTSIARFFGYEDSGKTLAVEQFMQDFYLH
ANRVEHFSSLLITKCTQRDEGKRKILGYFTRRPVGDGCYVVKGELVVPDESVIAKEPVRLMRIFEHAQKQGVTLALGTKR
LVRDNLDLVNDKFRRSKEAGTSFVNILQSEKGLAETLQQMHHLGFLNRFIPEFERIYCKVQHDAYHIYTVDTHTLFAVEE
IVKLCRGDHADTLPLLTQLAREVDKRWLLILAVMLHDIGKGGGGGHAEIGAELSKTIARRLGLTREDTERLQFLVRHHLL
LAHIAQRRDLHDERMIIQFARQMEKSENLKMLYLLTYADIKAVGPEVWTEWKALLLQELYDKAFRVLERGDFKLEASGDR
VRRVKKTVFELLADDYPGQLVKDELQALSTRHLLSYSPEIIAAHVRTLLRLPKEQMVVQLAHEVDKGYTNCTVCTYDIPG
LFSMITGVVAANGMNILGAQIHTNTNEKVLDILQVGSPQGFVITEESRWTRFQNDLRQVLEGKVKVSALVAKRHRPSILS
EKAKPTVPARVEIDNEVSSDYTVIDIYAHDKIGLLYGITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQKIMNPGK
LEEIRKELLDAVDG
>Mature_894_residues
MRLNINAYLSESLKGDGKSFEEKRGAYFAAAREFLEHFREESKRGHREGEDGISVVQSITAMTDALVVRLFTALSDDLQM
HKTGQLALVAVGGYGRRELNPYSDLDLMFLYSGKESKVVEEAANRLLYFLWDLRLDVGYSVRTLSDCVEMAGGDLTVKTA
LLDARLLTGSEQLYNDLKKLMVTQVLSKRSDSFISAKLDELKKRREKYGSSVYILEPNIKEGEGCLRDLHTAMWVAKIKY
KVDEPRELVIKGVLSEEELGLYYSSLNYLWRIRNELHYLAGRKNDQLTFDAQTSIARFFGYEDSGKTLAVEQFMQDFYLH
ANRVEHFSSLLITKCTQRDEGKRKILGYFTRRPVGDGCYVVKGELVVPDESVIAKEPVRLMRIFEHAQKQGVTLALGTKR
LVRDNLDLVNDKFRRSKEAGTSFVNILQSEKGLAETLQQMHHLGFLNRFIPEFERIYCKVQHDAYHIYTVDTHTLFAVEE
IVKLCRGDHADTLPLLTQLAREVDKRWLLILAVMLHDIGKGGGGGHAEIGAELSKTIARRLGLTREDTERLQFLVRHHLL
LAHIAQRRDLHDERMIIQFARQMEKSENLKMLYLLTYADIKAVGPEVWTEWKALLLQELYDKAFRVLERGDFKLEASGDR
VRRVKKTVFELLADDYPGQLVKDELQALSTRHLLSYSPEIIAAHVRTLLRLPKEQMVVQLAHEVDKGYTNCTVCTYDIPG
LFSMITGVVAANGMNILGAQIHTNTNEKVLDILQVGSPQGFVITEESRWTRFQNDLRQVLEGKVKVSALVAKRHRPSILS
EKAKPTVPARVEIDNEVSSDYTVIDIYAHDKIGLLYGITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQKIMNPGK
LEEIRKELLDAVDG

Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]

COG id: COG2844

COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glnD family [H]

Homologues:

Organism=Escherichia coli, GI1786363, Length=851, Percent_Identity=29.8472385428907, Blast_Score=349, Evalue=5e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR010043
- InterPro:   IPR003607
- InterPro:   IPR002934
- InterPro:   IPR013546 [H]

Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]

EC number: =2.7.7.59 [H]

Molecular weight: Translated: 101736; Mature: 101736

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNINAYLSESLKGDGKSFEEKRGAYFAAAREFLEHFREESKRGHREGEDGISVVQSIT
CEEEEHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AMTDALVVRLFTALSDDLQMHKTGQLALVAVGGYGRRELNPYSDLDLMFLYSGKESKVVE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHH
EAANRLLYFLWDLRLDVGYSVRTLSDCVEMAGGDLTVKTALLDARLLTGSEQLYNDLKKL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHH
MVTQVLSKRSDSFISAKLDELKKRREKYGSSVYILEPNIKEGEGCLRDLHTAMWVAKIKY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
KVDEPRELVIKGVLSEEELGLYYSSLNYLWRIRNELHYLAGRKNDQLTFDAQTSIARFFG
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHC
YEDSGKTLAVEQFMQDFYLHANRVEHFSSLLITKCTQRDEGKRKILGYFTRRPVGDGCYV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEE
VKGELVVPDESVIAKEPVRLMRIFEHAQKQGVTLALGTKRLVRDNLDLVNDKFRRSKEAG
EECCEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCHHHHHHHHHHHHHHH
TSFVNILQSEKGLAETLQQMHHLGFLNRFIPEFERIYCKVQHDAYHIYTVDTHTLFAVEE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEECCHHHHHHHH
IVKLCRGDHADTLPLLTQLAREVDKRWLLILAVMLHDIGKGGGGGHAEIGAELSKTIARR
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LGLTREDTERLQFLVRHHLLLAHIAQRRDLHDERMIIQFARQMEKSENLKMLYLLTYADI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHH
KAVGPEVWTEWKALLLQELYDKAFRVLERGDFKLEASGDRVRRVKKTVFELLADDYPGQL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHH
VKDELQALSTRHLLSYSPEIIAAHVRTLLRLPKEQMVVQLAHEVDKGYTNCTVCTYDIPG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCH
LFSMITGVVAANGMNILGAQIHTNTNEKVLDILQVGSPQGFVITEESRWTRFQNDLRQVL
HHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH
EGKVKVSALVAKRHRPSILSEKAKPTVPARVEIDNEVSSDYTVIDIYAHDKIGLLYGITS
HCHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHH
TLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQKIMNPGKLEEIRKELLDAVDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLNINAYLSESLKGDGKSFEEKRGAYFAAAREFLEHFREESKRGHREGEDGISVVQSIT
CEEEEHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AMTDALVVRLFTALSDDLQMHKTGQLALVAVGGYGRRELNPYSDLDLMFLYSGKESKVVE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHH
EAANRLLYFLWDLRLDVGYSVRTLSDCVEMAGGDLTVKTALLDARLLTGSEQLYNDLKKL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHH
MVTQVLSKRSDSFISAKLDELKKRREKYGSSVYILEPNIKEGEGCLRDLHTAMWVAKIKY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
KVDEPRELVIKGVLSEEELGLYYSSLNYLWRIRNELHYLAGRKNDQLTFDAQTSIARFFG
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHC
YEDSGKTLAVEQFMQDFYLHANRVEHFSSLLITKCTQRDEGKRKILGYFTRRPVGDGCYV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEE
VKGELVVPDESVIAKEPVRLMRIFEHAQKQGVTLALGTKRLVRDNLDLVNDKFRRSKEAG
EECCEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCHHHHHHHHHHHHHHH
TSFVNILQSEKGLAETLQQMHHLGFLNRFIPEFERIYCKVQHDAYHIYTVDTHTLFAVEE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEECCHHHHHHHH
IVKLCRGDHADTLPLLTQLAREVDKRWLLILAVMLHDIGKGGGGGHAEIGAELSKTIARR
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LGLTREDTERLQFLVRHHLLLAHIAQRRDLHDERMIIQFARQMEKSENLKMLYLLTYADI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHH
KAVGPEVWTEWKALLLQELYDKAFRVLERGDFKLEASGDRVRRVKKTVFELLADDYPGQL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHH
VKDELQALSTRHLLSYSPEIIAAHVRTLLRLPKEQMVVQLAHEVDKGYTNCTVCTYDIPG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCH
LFSMITGVVAANGMNILGAQIHTNTNEKVLDILQVGSPQGFVITEESRWTRFQNDLRQVL
HHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH
EGKVKVSALVAKRHRPSILSEKAKPTVPARVEIDNEVSSDYTVIDIYAHDKIGLLYGITS
HCHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHH
TLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQKIMNPGKLEEIRKELLDAVDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA