| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is pstC-2 [H]
Identifier: 197118234
GI number: 197118234
Start: 2144497
End: 2145501
Strand: Reverse
Name: pstC-2 [H]
Synonym: Gbem_1851
Alternate gene names: 197118234
Gene position: 2145501-2144497 (Counterclockwise)
Preceding gene: 197118240
Following gene: 197118233
Centisome position: 46.49
GC content: 62.19
Gene sequence:
>1005_bases TTGGATACAGACGCGTGCAGTTCCTACGGCAACAATGAAACGGAGACCGACTTGGCATCAGCGACAACACAACCGAAAAC CTCGAGGAAGGTGAATGGAGATTGCCTCTTCCGCTATCTCACCACCTTCTTTGCCTTCAGCATCATCCTGATCCTGGCGC TCATGCTTTACGAAATGACCGGCGAGAGCATGCCGGCCATCAAGGCCTTCGGCTGGAAGTTCGTGAAGTCGACGGAGTGG GACGCGGTCCAGGGAATCTTCGGCGCCCTCCCCTACCTCTACGGGTCGGTGGTCTCCTCGGTCCTGGCGCTCGCGCTCGC CACCCCCTTGAGCATCGGCGCGGCCCTCTTCATCACCGAAGTAGCGCCGGCGCGCGTCGGTGCCCTGGTTGCCCCCCTGG TGGAATTATTGGCGGCGATACCGTCGGTCATCTACGGCCTTTGGGGTGTGCTGGTGATGGCGCCTTGGCTCCAGTCCACG GTCCAGCCCTTCCTCATCGAGCACTTCGGCTTCATCCCGCTCTTCCAGGGCGCCCCCTACGGCGTCAGCATGCTGGCCGC GATCTTCATCCTGATGATCATGGTGGTGCCGATCATCACCTCCATCACCCGCGAGGTGCTGCTGGCCGTGCCGCAGAGCC AGAAGGAAGCGGCGATAGCGCTCGGCGCGACCCGCTGGGAGACCATCAAGATCGCCATCCTCCCCTACGGCAAATCAGGC ATCCTGGGAGCCTCGATCCTCGGTCTAGGCCGGGCCATCGGCGAGACCATGGCGGTCACCATGGTGATCGGCAACGCGCC CAACATCTCGCTGTCGCTCCTCTCCCCGGCCTATACCATGCCGAGCGTCATCGCCAACGAATTCGCCGAGACCACCTCGA AGCTGCATGCCTCGGCGCTGATGGAGATCGGCCTGATCCTCATGCTGGTCACCTTGATCGTGAACGCCCTGGCCAGGCTC TTGATCTGGAGCGTTTCTAGAAGCGCCAAGGGAGGTGCGGCATGA
Upstream 100 bases:
>100_bases GCGTCATGGTAAAGGATGAGCAAGTGGGACAAGCGTCGTCAGTGCTTGCGCCACGGCGGCCACATCCAATTGCGACAGAA GACGCACCGGAGGCAACGGC
Downstream 100 bases:
>100_bases CACAGGGCATGACCTTCCGCAAAACGAAGAACCACCTGATGAGCTTCGTGATGCTCGCCTGCACGCTGGCGGTGCTCATC CCGCTCGGGCTCATCTTTTT
Product: phosphate ABC transporter membrane protein PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MDTDACSSYGNNETETDLASATTQPKTSRKVNGDCLFRYLTTFFAFSIILILALMLYEMTGESMPAIKAFGWKFVKSTEW DAVQGIFGALPYLYGSVVSSVLALALATPLSIGAALFITEVAPARVGALVAPLVELLAAIPSVIYGLWGVLVMAPWLQST VQPFLIEHFGFIPLFQGAPYGVSMLAAIFILMIMVVPIITSITREVLLAVPQSQKEAAIALGATRWETIKIAILPYGKSG ILGASILGLGRAIGETMAVTMVIGNAPNISLSLLSPAYTMPSVIANEFAETTSKLHASALMEIGLILMLVTLIVNALARL LIWSVSRSAKGGAA
Sequences:
>Translated_334_residues MDTDACSSYGNNETETDLASATTQPKTSRKVNGDCLFRYLTTFFAFSIILILALMLYEMTGESMPAIKAFGWKFVKSTEW DAVQGIFGALPYLYGSVVSSVLALALATPLSIGAALFITEVAPARVGALVAPLVELLAAIPSVIYGLWGVLVMAPWLQST VQPFLIEHFGFIPLFQGAPYGVSMLAAIFILMIMVVPIITSITREVLLAVPQSQKEAAIALGATRWETIKIAILPYGKSG ILGASILGLGRAIGETMAVTMVIGNAPNISLSLLSPAYTMPSVIANEFAETTSKLHASALMEIGLILMLVTLIVNALARL LIWSVSRSAKGGAA >Mature_334_residues MDTDACSSYGNNETETDLASATTQPKTSRKVNGDCLFRYLTTFFAFSIILILALMLYEMTGESMPAIKAFGWKFVKSTEW DAVQGIFGALPYLYGSVVSSVLALALATPLSIGAALFITEVAPARVGALVAPLVELLAAIPSVIYGLWGVLVMAPWLQST VQPFLIEHFGFIPLFQGAPYGVSMLAAIFILMIMVVPIITSITREVLLAVPQSQKEAAIALGATRWETIKIAILPYGKSG ILGASILGLGRAIGETMAVTMVIGNAPNISLSLLSPAYTMPSVIANEFAETTSKLHASALMEIGLILMLVTLIVNALARL LIWSVSRSAKGGAA
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=314, Percent_Identity=41.4012738853503, Blast_Score=226, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35436; Mature: 35436
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTDACSSYGNNETETDLASATTQPKTSRKVNGDCLFRYLTTFFAFSIILILALMLYEMT CCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GESMPAIKAFGWKFVKSTEWDAVQGIFGALPYLYGSVVSSVLALALATPLSIGAALFITE CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAPARVGALVAPLVELLAAIPSVIYGLWGVLVMAPWLQSTVQPFLIEHFGFIPLFQGAPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GVSMLAAIFILMIMVVPIITSITREVLLAVPQSQKEAAIALGATRWETIKIAILPYGKSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEEEEECCCCC ILGASILGLGRAIGETMAVTMVIGNAPNISLSLLSPAYTMPSVIANEFAETTSKLHASAL CHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH MEIGLILMLVTLIVNALARLLIWSVSRSAKGGAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDTDACSSYGNNETETDLASATTQPKTSRKVNGDCLFRYLTTFFAFSIILILALMLYEMT CCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GESMPAIKAFGWKFVKSTEWDAVQGIFGALPYLYGSVVSSVLALALATPLSIGAALFITE CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAPARVGALVAPLVELLAAIPSVIYGLWGVLVMAPWLQSTVQPFLIEHFGFIPLFQGAPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GVSMLAAIFILMIMVVPIITSITREVLLAVPQSQKEAAIALGATRWETIKIAILPYGKSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEEEEECCCCC ILGASILGLGRAIGETMAVTMVIGNAPNISLSLLSPAYTMPSVIANEFAETTSKLHASAL CHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH MEIGLILMLVTLIVNALARLLIWSVSRSAKGGAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]