| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118206
Identifier: 197118206
GI number: 197118206
Start: 2114911
End: 2116020
Strand: Direct
Name: 197118206
Synonym: Gbem_1822
Alternate gene names: NA
Gene position: 2114911-2116020 (Clockwise)
Preceding gene: 197118205
Following gene: 197118207
Centisome position: 45.83
GC content: 64.77
Gene sequence:
>1110_bases ATGAACTCCCGTATCATCACCTACTGCAGCAACATCCATCCGGGCGAATCCTGGGAGGAGACCTTCAGGGCCTTGCAGGA GCATGTTCCAAAGGTTAAACAGGCCGTCTCCCCAGATGCACGCTTTCCCATCGGGCTGCGCCTGTCGGCCCGCGCCGCCA GGGAACTCCTCGCCGCGGGGCGCGCCTCCTTCGCGAGCTGGCTGCGCCAGGAGGGGTGTTACGTCCCCACCATCAACGGC TTCGTATACGGCGCCTTCCACGGGGAGGCGGTGAAACACAAGGTCTATCTCCCCGACTGGCACAGCCGGGAGCGGGCCGA GTACACGAACCTTCTCGCCGACCTCCTGGCCGAGTGGCTCCCCGCGGGGATGACCGGCTCCATCTCCACAGTCCCCATCG GATTCAAGGCGAGCCTCTCCCCCGCCGAGTACCGGACCCGGGTGCTGCAGGTCCTCACGCACCTGGACTGCCTGAAGGAG GAGATGGGGGTCGACATCGTCCTCGCCCTGGAACCGGAGCCCGCTTGCGTTCTGGAGACGACGGCCGATCTGGTGCGTTT CGTGGAGGAGATGGATCTTCCCGCACGGCTTAGGGAGCGGGTCGGGATCTGCCTTGACTGCTGTCATCTGGCGCAGCAGT TCGAGGAGCCGGAATCTGCCCTGTCGCTTCTGGCGGACAGCGGCATCCGTCTGGGGAAGGTGCAGGTTTCCTCGGCGCTT TCCGCTGGGCATGGCGACCGCGCTGCGCTTTCTTCCTTCGCCGAGCCGTGCTATCTGCACCAGGTGGTGATCCGCGGCAA GGACGGCACGCTTATCCGCTACAACGACCTCCCCGCCGCCTTAGAGCAGCACCGAGGGGAGGGTGGGGACGAGTGGCGCT GTCATTTCCATGTGCCGGTATTCCTGCAGGAAGCAGGGGCCCTCGGCACCACCCGCGGCTTTGCGGAGAAGCTATTGCCG CTTCTGGACCGGGATGTGCTGCTGGAAGTCGAGACCTACAGCTGGGGGGTGCTGCCGCCGCAGCTGCGGTCGGAGGATCT CTCCTCGTCCATCATCCGGGAGATCCAATGGTTGCAGGGGAGCGTCAATGCAACGGACTGTCGTCCTTAA
Upstream 100 bases:
>100_bases GAACGACGAGATATGGTACGCGAGGGAGAGCGCCGTCCCCCCCGTTGGGACGCCGGTGACCGTGCTCATCCACCTCTCCC CGTAACCAGGAGGGCTCGAC
Downstream 100 bases:
>100_bases CGTAGTAGGGCTTACCCGGGCGCTCATTGGCGACGGCACGCCGCGCCTGCGGGAGCTTCTCGCTGCAAGCGCCGATATAA AAAGCATAACGCCTGCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MNSRIITYCSNIHPGESWEETFRALQEHVPKVKQAVSPDARFPIGLRLSARAARELLAAGRASFASWLRQEGCYVPTING FVYGAFHGEAVKHKVYLPDWHSRERAEYTNLLADLLAEWLPAGMTGSISTVPIGFKASLSPAEYRTRVLQVLTHLDCLKE EMGVDIVLALEPEPACVLETTADLVRFVEEMDLPARLRERVGICLDCCHLAQQFEEPESALSLLADSGIRLGKVQVSSAL SAGHGDRAALSSFAEPCYLHQVVIRGKDGTLIRYNDLPAALEQHRGEGGDEWRCHFHVPVFLQEAGALGTTRGFAEKLLP LLDRDVLLEVETYSWGVLPPQLRSEDLSSSIIREIQWLQGSVNATDCRP
Sequences:
>Translated_369_residues MNSRIITYCSNIHPGESWEETFRALQEHVPKVKQAVSPDARFPIGLRLSARAARELLAAGRASFASWLRQEGCYVPTING FVYGAFHGEAVKHKVYLPDWHSRERAEYTNLLADLLAEWLPAGMTGSISTVPIGFKASLSPAEYRTRVLQVLTHLDCLKE EMGVDIVLALEPEPACVLETTADLVRFVEEMDLPARLRERVGICLDCCHLAQQFEEPESALSLLADSGIRLGKVQVSSAL SAGHGDRAALSSFAEPCYLHQVVIRGKDGTLIRYNDLPAALEQHRGEGGDEWRCHFHVPVFLQEAGALGTTRGFAEKLLP LLDRDVLLEVETYSWGVLPPQLRSEDLSSSIIREIQWLQGSVNATDCRP >Mature_369_residues MNSRIITYCSNIHPGESWEETFRALQEHVPKVKQAVSPDARFPIGLRLSARAARELLAAGRASFASWLRQEGCYVPTING FVYGAFHGEAVKHKVYLPDWHSRERAEYTNLLADLLAEWLPAGMTGSISTVPIGFKASLSPAEYRTRVLQVLTHLDCLKE EMGVDIVLALEPEPACVLETTADLVRFVEEMDLPARLRERVGICLDCCHLAQQFEEPESALSLLADSGIRLGKVQVSSAL SAGHGDRAALSSFAEPCYLHQVVIRGKDGTLIRYNDLPAALEQHRGEGGDEWRCHFHVPVFLQEAGALGTTRGFAEKLLP LLDRDVLLEVETYSWGVLPPQLRSEDLSSSIIREIQWLQGSVNATDCRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40926; Mature: 40926
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRIITYCSNIHPGESWEETFRALQEHVPKVKQAVSPDARFPIGLRLSARAARELLAAG CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHH RASFASWLRQEGCYVPTINGFVYGAFHGEAVKHKVYLPDWHSRERAEYTNLLADLLAEWL HHHHHHHHHHCCCEEEEECCEEEEEECCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHC PAGMTGSISTVPIGFKASLSPAEYRTRVLQVLTHLDCLKEEMGVDIVLALEPEPACVLET CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEHHH TADLVRFVEEMDLPARLRERVGICLDCCHLAQQFEEPESALSLLADSGIRLGKVQVSSAL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEHHHHHHHH SAGHGDRAALSSFAEPCYLHQVVIRGKDGTLIRYNDLPAALEQHRGEGGDEWRCHFHVPV HCCCCCHHHHHHHCCHHHHHHHHEECCCCCEEEECCCHHHHHHHCCCCCCCEEEEEECCH FLQEAGALGTTRGFAEKLLPLLDRDVLLEVETYSWGVLPPQLRSEDLSSSIIREIQWLQG HHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC SVNATDCRP CCCCCCCCC >Mature Secondary Structure MNSRIITYCSNIHPGESWEETFRALQEHVPKVKQAVSPDARFPIGLRLSARAARELLAAG CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHH RASFASWLRQEGCYVPTINGFVYGAFHGEAVKHKVYLPDWHSRERAEYTNLLADLLAEWL HHHHHHHHHHCCCEEEEECCEEEEEECCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHC PAGMTGSISTVPIGFKASLSPAEYRTRVLQVLTHLDCLKEEMGVDIVLALEPEPACVLET CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEHHH TADLVRFVEEMDLPARLRERVGICLDCCHLAQQFEEPESALSLLADSGIRLGKVQVSSAL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEHHHHHHHH SAGHGDRAALSSFAEPCYLHQVVIRGKDGTLIRYNDLPAALEQHRGEGGDEWRCHFHVPV HCCCCCHHHHHHHCCHHHHHHHHEECCCCCEEEECCCHHHHHHHCCCCCCCEEEEEECCH FLQEAGALGTTRGFAEKLLPLLDRDVLLEVETYSWGVLPPQLRSEDLSSSIIREIQWLQG HHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC SVNATDCRP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA