Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197118199

Identifier: 197118199

GI number: 197118199

Start: 2098265

End: 2099605

Strand: Direct

Name: 197118199

Synonym: Gbem_1814

Alternate gene names: NA

Gene position: 2098265-2099605 (Clockwise)

Preceding gene: 197118198

Following gene: 197118200

Centisome position: 45.46

GC content: 69.35

Gene sequence:

>1341_bases
ATGAGATTCCCGCTTCTTTCGCTCTGCCTCATGGCGCTCATGAGCCCGGCGGCGGCAGGCGCCGAGGAGGCCGGCCCCGC
CGCAGAACCGCTCCGTCTCGAACTGAAGCTGGCAAGGGCGCGGGTCTACCCGCGCATGCCGGTCCCGGTGACGGTAAGGC
TCATGGTGCGGGATGCGCAGTTGCGCGGGATAGGCTACCCCCGGCTTTCCCACCGCACTTTGCAGGTGGGGGAGTTCTCG
CTTCCCGCGAAGCGCGAGCTGGTTTTGGAGGGGGCCACTTACACCGCCTACGACTTCACCACCGTAGTCAGCGCCAGGCA
AAGCGGGAGCTACCGTTTGGGCCCGGCCGAGCTGGAAGCCGAACTACTCTCCCCGGCGTCCGGCGCGGCGGCCTTTTTCG
GCGCCACCGAATCGAAGCCGGTCGCGCTCAAGTCGCAGCCGCTTGCCCTCACCGTGCTCCCCGTCCCGATGCAGGGGCGC
CCGGACGGCTTTACCGGCGCAGTCGGGCGCTTCACGGTGAGCGTATCAGCCCGCCCCCGCGAAGTGAGCGCCGGCGACCC
GATCACCGTGCGCACCGTGATAAGGGGGGAAGGGGCCGAGCGCGAATTCTCCTGCCGCCCCATCGAGGCCCGCGGCTTCA
GGGGGTATCCCCCTGTTCAGGAAAAAGGGGCGGGGGAGCTTGTCTGCGAACAGCTTATGGTGCCGGAGACCGGGGGCGCG
GTGGAGATTCCCCCGGTCCGGATCAGCTTCTTCAACCCCTCCGCGGGGCGTTTCGGCACGGCCCAAAGCGAGGCGCTAGC
GCTTAAGGTGCGCCCTGCCGCAGCCGCTGCTGCTGCCCTGTCTGACGGGTCTGACAGGTCCGACAGGTCCGACAGGTCCG
ACAGGTCCGACAGGTCCGACAAGTCCGACAAGTCCGACAAGTCCGACCGAACAGGCGCCTTCTGGCTGGCGCTTTCCGCT
CTCGCGGCGCTCGCAGCTGCCGTCTTACTCTGCAGGAGGCTGCGCCGACAGACGCCGCCGTCCGGCGACGGCAGGCAGGG
CTGGCTTGCCGCGGCCCGCTCGGCACACGCCTCCGGCGACGCGAGCGCCTTTTATAGCGCCGCCTTCAGGCTGCTGCAGC
GGGTGGGGGGGGAGCGCCAGGGGCTCCCCGCGGCGGGCTGGACCGGCCCGCTGCCGGAGGGTGCGTTCGGCCGGGAGCAG
CAGGAGAGCCTTGCCGCGCTCCTTGCGCGCTGCGACCGGGTCCGTTACGGCGGAGAGATCCCGCAGCCCGAGCAGATGGC
CGCGGATCTGCTTCTCCTGGAGCAAGCGGAGGGTCCTTCAACGGCATGGGAAAATATTTGA

Upstream 100 bases:

>100_bases
GCCTCTTAGCCGAGGAGCGCGGGCGTGAGACGCTGGTGCCGCAGGTTTTGGGTGCCGGCGGCAAGGGGCGCCATGCCCCC
GCCGGGAAGGAGTGGTGAAG

Downstream 100 bases:

>100_bases
CATTGAATAATGCTTACCGTTTAATGTGTAACGCAGCCTTCCCTTTTTAATTGTGCCAACGCGGCGCCCTTTCTTTTTTC
GGCGTATCTAGCCGTCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MRFPLLSLCLMALMSPAAAGAEEAGPAAEPLRLELKLARARVYPRMPVPVTVRLMVRDAQLRGIGYPRLSHRTLQVGEFS
LPAKRELVLEGATYTAYDFTTVVSARQSGSYRLGPAELEAELLSPASGAAAFFGATESKPVALKSQPLALTVLPVPMQGR
PDGFTGAVGRFTVSVSARPREVSAGDPITVRTVIRGEGAEREFSCRPIEARGFRGYPPVQEKGAGELVCEQLMVPETGGA
VEIPPVRISFFNPSAGRFGTAQSEALALKVRPAAAAAAALSDGSDRSDRSDRSDRSDRSDKSDKSDKSDRTGAFWLALSA
LAALAAAVLLCRRLRRQTPPSGDGRQGWLAAARSAHASGDASAFYSAAFRLLQRVGGERQGLPAAGWTGPLPEGAFGREQ
QESLAALLARCDRVRYGGEIPQPEQMAADLLLLEQAEGPSTAWENI

Sequences:

>Translated_446_residues
MRFPLLSLCLMALMSPAAAGAEEAGPAAEPLRLELKLARARVYPRMPVPVTVRLMVRDAQLRGIGYPRLSHRTLQVGEFS
LPAKRELVLEGATYTAYDFTTVVSARQSGSYRLGPAELEAELLSPASGAAAFFGATESKPVALKSQPLALTVLPVPMQGR
PDGFTGAVGRFTVSVSARPREVSAGDPITVRTVIRGEGAEREFSCRPIEARGFRGYPPVQEKGAGELVCEQLMVPETGGA
VEIPPVRISFFNPSAGRFGTAQSEALALKVRPAAAAAAALSDGSDRSDRSDRSDRSDRSDKSDKSDKSDRTGAFWLALSA
LAALAAAVLLCRRLRRQTPPSGDGRQGWLAAARSAHASGDASAFYSAAFRLLQRVGGERQGLPAAGWTGPLPEGAFGREQ
QESLAALLARCDRVRYGGEIPQPEQMAADLLLLEQAEGPSTAWENI
>Mature_446_residues
MRFPLLSLCLMALMSPAAAGAEEAGPAAEPLRLELKLARARVYPRMPVPVTVRLMVRDAQLRGIGYPRLSHRTLQVGEFS
LPAKRELVLEGATYTAYDFTTVVSARQSGSYRLGPAELEAELLSPASGAAAFFGATESKPVALKSQPLALTVLPVPMQGR
PDGFTGAVGRFTVSVSARPREVSAGDPITVRTVIRGEGAEREFSCRPIEARGFRGYPPVQEKGAGELVCEQLMVPETGGA
VEIPPVRISFFNPSAGRFGTAQSEALALKVRPAAAAAAALSDGSDRSDRSDRSDRSDRSDKSDKSDKSDRTGAFWLALSA
LAALAAAVLLCRRLRRQTPPSGDGRQGWLAAARSAHASGDASAFYSAAFRLLQRVGGERQGLPAAGWTGPLPEGAFGREQ
QESLAALLARCDRVRYGGEIPQPEQMAADLLLLEQAEGPSTAWENI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47439; Mature: 47439

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPLLSLCLMALMSPAAAGAEEAGPAAEPLRLELKLARARVYPRMPVPVTVRLMVRDAQ
CCCCHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEEHHHHCCCCCCCCEEEEEEEEEHH
LRGIGYPRLSHRTLQVGEFSLPAKRELVLEGATYTAYDFTTVVSARQSGSYRLGPAELEA
HCCCCCCCCCCCEEEECCCCCCCCCEEEEECCEEEEHHHHHHHHHHCCCCCCCCHHHHHH
ELLSPASGAAAFFGATESKPVALKSQPLALTVLPVPMQGRPDGFTGAVGRFTVSVSARPR
HHHCCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCC
EVSAGDPITVRTVIRGEGAEREFSCRPIEARGFRGYPPVQEKGAGELVCEQLMVPETGGA
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCE
VEIPPVRISFFNPSAGRFGTAQSEALALKVRPAAAAAAALSDGSDRSDRSDRSDRSDRSD
EECCCEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
KSDKSDKSDRTGAFWLALSALAALAAAVLLCRRLRRQTPPSGDGRQGWLAAARSAHASGD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC
ASAFYSAAFRLLQRVGGERQGLPAAGWTGPLPEGAFGREQQESLAALLARCDRVRYGGEI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PQPEQMAADLLLLEQAEGPSTAWENI
CCHHHHHHHHHHEECCCCCCCCCCCC
>Mature Secondary Structure
MRFPLLSLCLMALMSPAAAGAEEAGPAAEPLRLELKLARARVYPRMPVPVTVRLMVRDAQ
CCCCHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEEHHHHCCCCCCCCEEEEEEEEEHH
LRGIGYPRLSHRTLQVGEFSLPAKRELVLEGATYTAYDFTTVVSARQSGSYRLGPAELEA
HCCCCCCCCCCCEEEECCCCCCCCCEEEEECCEEEEHHHHHHHHHHCCCCCCCCHHHHHH
ELLSPASGAAAFFGATESKPVALKSQPLALTVLPVPMQGRPDGFTGAVGRFTVSVSARPR
HHHCCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCC
EVSAGDPITVRTVIRGEGAEREFSCRPIEARGFRGYPPVQEKGAGELVCEQLMVPETGGA
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCE
VEIPPVRISFFNPSAGRFGTAQSEALALKVRPAAAAAAALSDGSDRSDRSDRSDRSDRSD
EECCCEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
KSDKSDKSDRTGAFWLALSALAALAAAVLLCRRLRRQTPPSGDGRQGWLAAARSAHASGD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC
ASAFYSAAFRLLQRVGGERQGLPAAGWTGPLPEGAFGREQQESLAALLARCDRVRYGGEI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PQPEQMAADLLLLEQAEGPSTAWENI
CCHHHHHHHHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA