| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118064
Identifier: 197118064
GI number: 197118064
Start: 1940705
End: 1941064
Strand: Reverse
Name: 197118064
Synonym: Gbem_1677
Alternate gene names: NA
Gene position: 1941064-1940705 (Counterclockwise)
Preceding gene: 197118065
Following gene: 197118063
Centisome position: 42.06
GC content: 65.56
Gene sequence:
>360_bases GTGACCCCGGACGTCTCAGCAAGCCCCGCGGCCCTAGCGCTCCTTTTGCCGGCGCTTTTCATCTGCGCCTTCTGCTGCCT GGCCCTGGCGGTAATGAAGGGGTTCTACGTGAAGCTGCACTACCTGGCTCCCCCCGCCGTCCTGGCAGGGGTCCTGGTGG CGGCAGCCATTGCATTTGAGGAAGGAATGGGAGCCAACGCGGTCAAGGCGGGGCTGGTGCTCCTGGTGCTCTTGATCGGA AACCCGGTCATCACCTTCGCGGCGGCGCGCGCCTACCACCTGCGGCAGGTCTCCCGGCAAGAGGCCGAGGATGGAAAGCG TGAGGAGGAGGCGCAAAAGGACGGGGCAGATGGTCCCTAA
Upstream 100 bases:
>100_bases AGGGGTACGGCCGCGACATCTACTTCGACCTCGCCCTGGTGCTGGCGACCCTCTCCTTTGCCTCCGGGCTCGTCTACATC CGCTTCCTGGAGCGCTGGCT
Downstream 100 bases:
>100_bases AAAGGAGTAGCGCATGGACCCGCTATTAACGGTGGCATTCGTGATGGTGGCGTTAGCCGGATGGGCTGTGGTGGCGGTGC GGGACCCGCTGGAGCAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTPDVSASPAALALLLPALFICAFCCLALAVMKGFYVKLHYLAPPAVLAGVLVAAAIAFEEGMGANAVKAGLVLLVLLIG NPVITFAAARAYHLRQVSRQEAEDGKREEEAQKDGADGP
Sequences:
>Translated_119_residues MTPDVSASPAALALLLPALFICAFCCLALAVMKGFYVKLHYLAPPAVLAGVLVAAAIAFEEGMGANAVKAGLVLLVLLIG NPVITFAAARAYHLRQVSRQEAEDGKREEEAQKDGADGP >Mature_118_residues TPDVSASPAALALLLPALFICAFCCLALAVMKGFYVKLHYLAPPAVLAGVLVAAAIAFEEGMGANAVKAGLVLLVLLIGN PVITFAAARAYHLRQVSRQEAEDGKREEEAQKDGADGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12364; Mature: 12232
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDVSASPAALALLLPALFICAFCCLALAVMKGFYVKLHYLAPPAVLAGVLVAAAIAFE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EGMGANAVKAGLVLLVLLIGNPVITFAAARAYHLRQVSRQEAEDGKREEEAQKDGADGP HCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC >Mature Secondary Structure TPDVSASPAALALLLPALFICAFCCLALAVMKGFYVKLHYLAPPAVLAGVLVAAAIAFE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EGMGANAVKAGLVLLVLLIGNPVITFAAARAYHLRQVSRQEAEDGKREEEAQKDGADGP HCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA