Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118026

Identifier: 197118026

GI number: 197118026

Start: 1903791

End: 1904579

Strand: Direct

Name: 197118026

Synonym: Gbem_1639

Alternate gene names: NA

Gene position: 1903791-1904579 (Clockwise)

Preceding gene: 197118025

Following gene: 197118027

Centisome position: 41.25

GC content: 64.89

Gene sequence:

>789_bases
ATGAGTTCTATATTGAAGGCGCTGGAGAAGGTTGAGGATGCGCAAAACCAGAAGCGGAACCCCGGTGCCGGCGGGCTGGG
GAGAAAGCGAGAGCGCAGGCCGGCCTGGCTGATCCCCGCCTGGTCATTGGGCGGCGCGGCAGTTGCCACCTTGGTCACCT
ATGCCATCATGGGGGGATTCGGGAAGTCCGCTCCCCCTGCCGCGCAGGTTGTGGCAACAGCTCCGCAACCCCCGGCTCAA
CCGGTCGCCCCCGTTGCGAAGGCTGCCGTGTCAGCCACCCCTGCGACGACCGCTCTTGTGACGACTGCTCCTGCGACCGC
TCCTGCTGCGCCCGTAAAACCGGTAGCGGCGCCGGTGGCGGTAAAGCCTCAGCAAACAAGGCATGAGGTCAAGACGCCGG
TTCGAAAACAGCAAGTTGCGTCTGTCCCCAAACATGCTGCCACACTGGCTGCCAAACCGGCCGCAAAACAGCAACGGTCT
GCCAAAGTCCCGGTGCCGCAGGTTCCCGCTCGTCCCGCTGCCGTCTATGCGGCTCCCGCGCTTGCTGCGCCGGTTGCTGC
CCAACCGCCGCGCGCCGTTTCTTCCGAGAAGACGCACCAGGAGATCCGGGTGACCGGCATTGCGTGGCAGAACGACAGCC
AGTCCAGCTTCGCCATGGTGAACGGCCGCCCGGTTCGGCAGGGTGCGGTGGTCGACGGTTACAAGGTGGAGCAGATATTC
GAGGACAGCGTCAGGTTTTCCGGCAGCAAAGGGCCCGTCACCATTCCGCTGGGAGCGTCGGAGCAGTAG

Upstream 100 bases:

>100_bases
CGGACGCGCTCCCTACGGGATAATAGCGAGAATTTTAAGGCGCGTCTTGGGGCGCGTGCCGCGCTGGCTCAACTAAGATC
AAAGAAACCGAGGGTTCTTT

Downstream 100 bases:

>100_bases
GAGGAGACCGTAGTATGTCGGGAGTGAAGTTGAACCGGGAACAATGGGAGGGGCTTTGCGAGCAATGCGGCCTTTGCTGT
TTTGAAAAGATTGAGGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSSILKALEKVEDAQNQKRNPGAGGLGRKRERRPAWLIPAWSLGGAAVATLVTYAIMGGFGKSAPPAAQVVATAPQPPAQ
PVAPVAKAAVSATPATTALVTTAPATAPAAPVKPVAAPVAVKPQQTRHEVKTPVRKQQVASVPKHAATLAAKPAAKQQRS
AKVPVPQVPARPAAVYAAPALAAPVAAQPPRAVSSEKTHQEIRVTGIAWQNDSQSSFAMVNGRPVRQGAVVDGYKVEQIF
EDSVRFSGSKGPVTIPLGASEQ

Sequences:

>Translated_262_residues
MSSILKALEKVEDAQNQKRNPGAGGLGRKRERRPAWLIPAWSLGGAAVATLVTYAIMGGFGKSAPPAAQVVATAPQPPAQ
PVAPVAKAAVSATPATTALVTTAPATAPAAPVKPVAAPVAVKPQQTRHEVKTPVRKQQVASVPKHAATLAAKPAAKQQRS
AKVPVPQVPARPAAVYAAPALAAPVAAQPPRAVSSEKTHQEIRVTGIAWQNDSQSSFAMVNGRPVRQGAVVDGYKVEQIF
EDSVRFSGSKGPVTIPLGASEQ
>Mature_261_residues
SSILKALEKVEDAQNQKRNPGAGGLGRKRERRPAWLIPAWSLGGAAVATLVTYAIMGGFGKSAPPAAQVVATAPQPPAQP
VAPVAKAAVSATPATTALVTTAPATAPAAPVKPVAAPVAVKPQQTRHEVKTPVRKQQVASVPKHAATLAAKPAAKQQRSA
KVPVPQVPARPAAVYAAPALAAPVAAQPPRAVSSEKTHQEIRVTGIAWQNDSQSSFAMVNGRPVRQGAVVDGYKVEQIFE
DSVRFSGSKGPVTIPLGASEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26936; Mature: 26805

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSILKALEKVEDAQNQKRNPGAGGLGRKRERRPAWLIPAWSLGGAAVATLVTYAIMGGF
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
GKSAPPAAQVVATAPQPPAQPVAPVAKAAVSATPATTALVTTAPATAPAAPVKPVAAPVA
CCCCCCHHHEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCE
VKPQQTRHEVKTPVRKQQVASVPKHAATLAAKPAAKQQRSAKVPVPQVPARPAAVYAAPA
ECCHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHCCHH
LAAPVAAQPPRAVSSEKTHQEIRVTGIAWQNDSQSSFAMVNGRPVRQGAVVDGYKVEQIF
HHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCEECCHHHHHHH
EDSVRFSGSKGPVTIPLGASEQ
HHHHHCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SSILKALEKVEDAQNQKRNPGAGGLGRKRERRPAWLIPAWSLGGAAVATLVTYAIMGGF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
GKSAPPAAQVVATAPQPPAQPVAPVAKAAVSATPATTALVTTAPATAPAAPVKPVAAPVA
CCCCCCHHHEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCE
VKPQQTRHEVKTPVRKQQVASVPKHAATLAAKPAAKQQRSAKVPVPQVPARPAAVYAAPA
ECCHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHCCHH
LAAPVAAQPPRAVSSEKTHQEIRVTGIAWQNDSQSSFAMVNGRPVRQGAVVDGYKVEQIF
HHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCEECCHHHHHHH
EDSVRFSGSKGPVTIPLGASEQ
HHHHHCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA