Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118006

Identifier: 197118006

GI number: 197118006

Start: 1878651

End: 1879991

Strand: Direct

Name: 197118006

Synonym: Gbem_1619

Alternate gene names: NA

Gene position: 1878651-1879991 (Clockwise)

Preceding gene: 197118005

Following gene: 197118007

Centisome position: 40.71

GC content: 55.26

Gene sequence:

>1341_bases
ATGAACGACGGCTCGCATCTCTACCTGCTGCTTTGCACCAACGCCCTCGTCTGGCTGCTTCCCCCCTTGCTGCACAAGGG
CTTGGACCGATATTACTTGCTGATCATGGCCTCCATCTTCTCGGCAAGCTACTGGACCTACCTTCCGGTCCATTACTACT
TCGGCTTCAACTTCTCGGGGGACATCGTTCAGGAGTTCATTCCCCAAGTGCTGGTGTACTCGATATTAGCCGCGCTTTCC
TTCCACGGAGGCGCCCTTTTGCTCGCCGAAAGGAAGACGAAAAAGGAGATTCAAAAGCTACGGCCGCGGCTGGGCAATCC
GCTGCAAGGCATCCCCCCGATGCCTCTCATCGCACTCGCCATCAGGATCGCATCCTGCGTGATGATGCTATATTCATACG
TTTGCGCGATAAGGCAGATCGGAATTGGGACGAGAGTGCAGTTCATGGAGGACGTGGCGCCGCTTTGGTATACGACGCTA
CTTCCCCTCAACATGGTCCTTTTAAGCATGCTCATTCTCTACGATTTTAAAAGGCCACTTCGGCGCATGAATTGGAGAAT
CAATCTCACGCTATTACTGGTCCTCCTGCACATCGTTCTGGTAGGCTTCGACGGGTCTAGAAGGCTTGCTCTCCCGCCTG
TGCTGATCCTCGGTGTGGTCACCTTTTTCTCATGGGCCAGTGGCGAGGCCAGAATGCTTCTCGTGCGGCGCATGATCTGG
TGCATCGTGCTGCTGTTCCTACTCTCTAGCCTGCTTGGCATGAACCGCGATTTCTACGTCGGATGGCAGATGTTCGCCGT
GAGCTTCTCGCTCTTGGTCGACTACTTCCCGAACGTGGTCTCCATGGTGATCTCCCCGATGTCGACCTTGCACGTGAATA
CAGAGATGGCGGACTACATAGCCTCAAGCGGCATACAGGGTTTTTCCTACTATGTGAAGGCAGTTGGTAACACTTTGTTC
CCCCGCTTCCTGTTCGGCCGCTATTTTTTCGGCGAACCGCTGGTGGTTGTACTTCACGAGAGGTTCGGCTGGTACGGCCA
GGACTTCGGCTTCCTGGCGGAGGCGATCTACTCGGGAGGGATGCCCGCGGTGGCGTTCATGCACCTATGCTACGGCGTGG
TCGTCGCCAAGGTCCTGAACGGGATAGCGAAAGGGAAGACAATTTTCTCCGTGCTCGGCATCGGTATCCTCTTCGGTGCG
TTAAACTCCCTTCGTTCCGATTTCATGAACCTCCTGAAGGCTACCCTATACCCAGCGATTGCGCTTTACCTTGTCCTCTT
TCTGTTCCAGAAGTTCAAGGTTGCCCGCACCGCCAAACCCCGACAGGAGGTGAGCGCGTGA

Upstream 100 bases:

>100_bases
AGAAGGAGGGTGGGAAAGAATTGATCTGTGCCAGTTGCTCCGCGCGCTACCAGGTTAAGCAGGAAATCCCCCACATGTAC
CAATCGGCTCAAACTGCGAT

Downstream 100 bases:

>100_bases
TTGTCGTCGGCGTGGATGCCTCGAATATTAGGGCCGGGGGCGGGATAACGCATCTGGGGCAGCTTTTGGCCGCCGCAGAC
CTAGAGGCGCTCGGGGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MNDGSHLYLLLCTNALVWLLPPLLHKGLDRYYLLIMASIFSASYWTYLPVHYYFGFNFSGDIVQEFIPQVLVYSILAALS
FHGGALLLAERKTKKEIQKLRPRLGNPLQGIPPMPLIALAIRIASCVMMLYSYVCAIRQIGIGTRVQFMEDVAPLWYTTL
LPLNMVLLSMLILYDFKRPLRRMNWRINLTLLLVLLHIVLVGFDGSRRLALPPVLILGVVTFFSWASGEARMLLVRRMIW
CIVLLFLLSSLLGMNRDFYVGWQMFAVSFSLLVDYFPNVVSMVISPMSTLHVNTEMADYIASSGIQGFSYYVKAVGNTLF
PRFLFGRYFFGEPLVVVLHERFGWYGQDFGFLAEAIYSGGMPAVAFMHLCYGVVVAKVLNGIAKGKTIFSVLGIGILFGA
LNSLRSDFMNLLKATLYPAIALYLVLFLFQKFKVARTAKPRQEVSA

Sequences:

>Translated_446_residues
MNDGSHLYLLLCTNALVWLLPPLLHKGLDRYYLLIMASIFSASYWTYLPVHYYFGFNFSGDIVQEFIPQVLVYSILAALS
FHGGALLLAERKTKKEIQKLRPRLGNPLQGIPPMPLIALAIRIASCVMMLYSYVCAIRQIGIGTRVQFMEDVAPLWYTTL
LPLNMVLLSMLILYDFKRPLRRMNWRINLTLLLVLLHIVLVGFDGSRRLALPPVLILGVVTFFSWASGEARMLLVRRMIW
CIVLLFLLSSLLGMNRDFYVGWQMFAVSFSLLVDYFPNVVSMVISPMSTLHVNTEMADYIASSGIQGFSYYVKAVGNTLF
PRFLFGRYFFGEPLVVVLHERFGWYGQDFGFLAEAIYSGGMPAVAFMHLCYGVVVAKVLNGIAKGKTIFSVLGIGILFGA
LNSLRSDFMNLLKATLYPAIALYLVLFLFQKFKVARTAKPRQEVSA
>Mature_446_residues
MNDGSHLYLLLCTNALVWLLPPLLHKGLDRYYLLIMASIFSASYWTYLPVHYYFGFNFSGDIVQEFIPQVLVYSILAALS
FHGGALLLAERKTKKEIQKLRPRLGNPLQGIPPMPLIALAIRIASCVMMLYSYVCAIRQIGIGTRVQFMEDVAPLWYTTL
LPLNMVLLSMLILYDFKRPLRRMNWRINLTLLLVLLHIVLVGFDGSRRLALPPVLILGVVTFFSWASGEARMLLVRRMIW
CIVLLFLLSSLLGMNRDFYVGWQMFAVSFSLLVDYFPNVVSMVISPMSTLHVNTEMADYIASSGIQGFSYYVKAVGNTLF
PRFLFGRYFFGEPLVVVLHERFGWYGQDFGFLAEAIYSGGMPAVAFMHLCYGVVVAKVLNGIAKGKTIFSVLGIGILFGA
LNSLRSDFMNLLKATLYPAIALYLVLFLFQKFKVARTAKPRQEVSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50429; Mature: 50429

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDGSHLYLLLCTNALVWLLPPLLHKGLDRYYLLIMASIFSASYWTYLPVHYYFGFNFSG
CCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCH
DIVQEFIPQVLVYSILAALSFHGGALLLAERKTKKEIQKLRPRLGNPLQGIPPMPLIALA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
IRIASCVMMLYSYVCAIRQIGIGTRVQFMEDVAPLWYTTLLPLNMVLLSMLILYDFKRPL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRMNWRINLTLLLVLLHIVLVGFDGSRRLALPPVLILGVVTFFSWASGEARMLLVRRMIW
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
CIVLLFLLSSLLGMNRDFYVGWQMFAVSFSLLVDYFPNVVSMVISPMSTLHVNTEMADYI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECHHHHHHH
ASSGIQGFSYYVKAVGNTLFPRFLFGRYFFGEPLVVVLHERFGWYGQDFGFLAEAIYSGG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCC
MPAVAFMHLCYGVVVAKVLNGIAKGKTIFSVLGIGILFGALNSLRSDFMNLLKATLYPAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALYLVLFLFQKFKVARTAKPRQEVSA
HHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MNDGSHLYLLLCTNALVWLLPPLLHKGLDRYYLLIMASIFSASYWTYLPVHYYFGFNFSG
CCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCH
DIVQEFIPQVLVYSILAALSFHGGALLLAERKTKKEIQKLRPRLGNPLQGIPPMPLIALA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
IRIASCVMMLYSYVCAIRQIGIGTRVQFMEDVAPLWYTTLLPLNMVLLSMLILYDFKRPL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRMNWRINLTLLLVLLHIVLVGFDGSRRLALPPVLILGVVTFFSWASGEARMLLVRRMIW
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
CIVLLFLLSSLLGMNRDFYVGWQMFAVSFSLLVDYFPNVVSMVISPMSTLHVNTEMADYI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECHHHHHHH
ASSGIQGFSYYVKAVGNTLFPRFLFGRYFFGEPLVVVLHERFGWYGQDFGFLAEAIYSGG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCC
MPAVAFMHLCYGVVVAKVLNGIAKGKTIFSVLGIGILFGALNSLRSDFMNLLKATLYPAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALYLVLFLFQKFKVARTAKPRQEVSA
HHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA