| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118004
Identifier: 197118004
GI number: 197118004
Start: 1876676
End: 1877734
Strand: Direct
Name: 197118004
Synonym: Gbem_1617
Alternate gene names: NA
Gene position: 1876676-1877734 (Clockwise)
Preceding gene: 197118003
Following gene: 197118005
Centisome position: 40.66
GC content: 60.81
Gene sequence:
>1059_bases GTGAGAATCCTAGTAGCCGGCGACTGGCACTCGGACCTGCACGAGGAGGCGGTCTACCGTGCCTTTGCCGCACTCGGGCA CGAGCCGTACCGCTTTTCTTGGCATCAGTACTTCAAAGGGGCAGGTACAGGTCTTATAGGACAGTTCACCGGCGTCGCTG GGAGGATCCAGAACCGGCTCATAGCAGGGCCCCTGATCTCCCGACTGAACCTTGACTTCATCGCTGCGGTTCTTGAAGTG CGCCCCGAGTTGATCTTCGTCTACCGCGGCACGCACATCTCCAAGGATGCGCTCAAGACGATCAAAGAAGGGCTCCCGGG GACGGTGCTCGTGGGGTACAACAACGACGATCCCTTCGCCCAGGGACACTCCCGGCTGCTATGGCGGCATTTTCTGGCCG CGGTGCCAGCCTACGACCTGATGCTTGCCTACCGGTTGCACAATCTGGAGGACTTCAGACGGGCAGGTGCGCGCCGGGTT GAGTTGCTCCGGTCCTGGTATATCCCGGAGCGGAACAGGCCAGTTAAGCTGACCTCTCACGAGGCCGAGCAGTTCTCCAG CGATGTGGTTTTTGCCGGGCATTACGAGGCGGACGGCCGCGACCTTTTGTTGGAAGGGATCGTTCACGAGGAGGGGGTGC GTTTCCGGCTCTTCGGCCCAGAGTGGCAGCACGTGGTCAAGCGCTCGCCGGTTTTGGCGCGCCTTGCACCGATAGTGCCG CTGCTAGGCGATGAATATAACAAGGCCCTCTGCGGGGCGAAGATCGCACTCTGCCTCCTCTCGAAGCTGAATCGTGACAC GTATACTAGGCGATGTTTTGAGATTCCGGCAGCCGGGACGTTCATGCTCGCCGAGCATTCCGACGACTTGGGTGCGCTGT TTCGGGAGGGGAAGGAGGCAGAGTTCTTTCGTTCTACCGGCGAACTTATTGAGAAGATCAGGCACTACCTGCGACACGAT GCTGAGCGGGAGGCCGTGGCTGCGGCGGGGAGGGCACGCGTGGTCGCGGATGGCCACGACGTGGTATCGCGCATGCGAAC CCTCCTGGCAAAAATCTGA
Upstream 100 bases:
>100_bases TGCTGCTCGGAAGCCGTAGGAGCGCGATCATCATCTGTTGGATCAAGGAAAAACTCGGTCGCACCCCAACCATTGGGACG GTGTACCAAGGGGAGGTGCG
Downstream 100 bases:
>100_bases CGTAGCAATGAAGGGGAAATATGGCGTCTTTAGATCACGAATCCGCTCTTATGCGTCTTTTCAGAAAAATCAACCAAGAC AGGTTCGCTTGGCCGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MRILVAGDWHSDLHEEAVYRAFAALGHEPYRFSWHQYFKGAGTGLIGQFTGVAGRIQNRLIAGPLISRLNLDFIAAVLEV RPELIFVYRGTHISKDALKTIKEGLPGTVLVGYNNDDPFAQGHSRLLWRHFLAAVPAYDLMLAYRLHNLEDFRRAGARRV ELLRSWYIPERNRPVKLTSHEAEQFSSDVVFAGHYEADGRDLLLEGIVHEEGVRFRLFGPEWQHVVKRSPVLARLAPIVP LLGDEYNKALCGAKIALCLLSKLNRDTYTRRCFEIPAAGTFMLAEHSDDLGALFREGKEAEFFRSTGELIEKIRHYLRHD AEREAVAAAGRARVVADGHDVVSRMRTLLAKI
Sequences:
>Translated_352_residues MRILVAGDWHSDLHEEAVYRAFAALGHEPYRFSWHQYFKGAGTGLIGQFTGVAGRIQNRLIAGPLISRLNLDFIAAVLEV RPELIFVYRGTHISKDALKTIKEGLPGTVLVGYNNDDPFAQGHSRLLWRHFLAAVPAYDLMLAYRLHNLEDFRRAGARRV ELLRSWYIPERNRPVKLTSHEAEQFSSDVVFAGHYEADGRDLLLEGIVHEEGVRFRLFGPEWQHVVKRSPVLARLAPIVP LLGDEYNKALCGAKIALCLLSKLNRDTYTRRCFEIPAAGTFMLAEHSDDLGALFREGKEAEFFRSTGELIEKIRHYLRHD AEREAVAAAGRARVVADGHDVVSRMRTLLAKI >Mature_352_residues MRILVAGDWHSDLHEEAVYRAFAALGHEPYRFSWHQYFKGAGTGLIGQFTGVAGRIQNRLIAGPLISRLNLDFIAAVLEV RPELIFVYRGTHISKDALKTIKEGLPGTVLVGYNNDDPFAQGHSRLLWRHFLAAVPAYDLMLAYRLHNLEDFRRAGARRV ELLRSWYIPERNRPVKLTSHEAEQFSSDVVFAGHYEADGRDLLLEGIVHEEGVRFRLFGPEWQHVVKRSPVLARLAPIVP LLGDEYNKALCGAKIALCLLSKLNRDTYTRRCFEIPAAGTFMLAEHSDDLGALFREGKEAEFFRSTGELIEKIRHYLRHD AEREAVAAAGRARVVADGHDVVSRMRTLLAKI
Specific function: Unknown
COG id: COG4641
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39832; Mature: 39832
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILVAGDWHSDLHEEAVYRAFAALGHEPYRFSWHQYFKGAGTGLIGQFTGVAGRIQNRL CEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH IAGPLISRLNLDFIAAVLEVRPELIFVYRGTHISKDALKTIKEGLPGTVLVGYNNDDPFA HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCH QGHSRLLWRHFLAAVPAYDLMLAYRLHNLEDFRRAGARRVELLRSWYIPERNRPVKLTSH HHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC EAEQFSSDVVFAGHYEADGRDLLLEGIVHEEGVRFRLFGPEWQHVVKRSPVLARLAPIVP HHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHHHHHHHH LLGDEYNKALCGAKIALCLLSKLNRDTYTRRCFEIPAAGTFMLAEHSDDLGALFREGKEA HHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCHH EFFRSTGELIEKIRHYLRHDAEREAVAAAGRARVVADGHDVVSRMRTLLAKI HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCC >Mature Secondary Structure MRILVAGDWHSDLHEEAVYRAFAALGHEPYRFSWHQYFKGAGTGLIGQFTGVAGRIQNRL CEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH IAGPLISRLNLDFIAAVLEVRPELIFVYRGTHISKDALKTIKEGLPGTVLVGYNNDDPFA HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCH QGHSRLLWRHFLAAVPAYDLMLAYRLHNLEDFRRAGARRVELLRSWYIPERNRPVKLTSH HHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC EAEQFSSDVVFAGHYEADGRDLLLEGIVHEEGVRFRLFGPEWQHVVKRSPVLARLAPIVP HHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHHHHHHHH LLGDEYNKALCGAKIALCLLSKLNRDTYTRRCFEIPAAGTFMLAEHSDDLGALFREGKEA HHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCHH EFFRSTGELIEKIRHYLRHDAEREAVAAAGRARVVADGHDVVSRMRTLLAKI HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA