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The map label for this gene is fdhE [H]

Identifier: 197117959

GI number: 197117959

Start: 1821165

End: 1822007

Strand: Reverse

Name: fdhE [H]

Synonym: Gbem_1572

Alternate gene names: 197117959

Gene position: 1822007-1821165 (Counterclockwise)

Preceding gene: 197117960

Following gene: 197117958

Centisome position: 39.48

GC content: 66.55

Gene sequence:

>843_bases
ATGTACAGCACGGAGAGGAAAATCGAGGCGCTGCAGAGCGCGGTGCACCGGGCGCCGGAATATGCGGCCATCGCGCCGTT
CTTCGCGGCGGTCTACCACTACCAGTTGCAGCACGAAGGAGGCACCGGCATCGGGGTCGAACTGGCCGGAGTGGATCAGG
AGCAAAGAAGCTCGAACGGCTTCCCGCTCATCTCCCCCTCGGAGCTGAGGGTGGACCGGTTGACGCTGGTCACCTTCCTG
GCCGGTTTGGTGACGGTGCTGGAGGCGGAGAGCACGGAGGGGGCGGCGGCGCTACGGAATATCGGGGAGGCGTTGCAATC
CGGGAAGCTCGACCCGGAGCCTATGCTGGCGGCCATATTGGAGCGGCGCCGCGCCCCGCTGGACGAGGCTTCCCTGGCAC
TTGGTGTGCCGGGAGCGCTTCTTGAGTACATCCTGGAGATTCCGCTGAAGGCAGCGCTGGAACCTTGCGCCGCCGTGCTC
GGCGCGGGGGCCTTCCCCGGGTGGCACGAAAGCATCTGCCCCGTTTGCGGCGCGCGTCCGGCCATGGCAGAGCTCTCAGG
CGACGAAGGGGAGCGCCGCCTCTGCTGCTCGACCTGCAGCTACAGCTGGTCCTTCCGCAGGATCAAGTGCCCGTCCTGCG
GCTGCGAAGACCCGCAACAGCTCTCCTACTTCACCGCAGGCGAGGGGGCGACCCGGGTCGATACCTGCCGGGCTTGCAGC
AGGTACATCAAGACGCGCGACACAAGGAAGGGTGGGAGCGAGGTGCCGCTGGAGGTGGAGGATCTGCTGACCATCCACCT
GGACCTGCTGGCGTCCAGAGAAGGGTTCGTACGGGGCAAGTAG

Upstream 100 bases:

>100_bases
AGACGTCCGCAAGGATTGGGCGCGTCATCACCATCCGAGATGGTACCGGGAGCGGACCGGCGGGAAATAAACCTTGAGAC
CACACAGACAGGAGCCGGAA

Downstream 100 bases:

>100_bases
AAAGGACATCTTATGAAGAAGACAGGAGCAACAAGACGGCAGGTCGCCGCGGGCGGTATCACCGGGGTCATCCTGGCGGG
GGGGGTCTCCAGCCGCATGG

Product: formate dehydrogenase formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MYSTERKIEALQSAVHRAPEYAAIAPFFAAVYHYQLQHEGGTGIGVELAGVDQEQRSSNGFPLISPSELRVDRLTLVTFL
AGLVTVLEAESTEGAAALRNIGEALQSGKLDPEPMLAAILERRRAPLDEASLALGVPGALLEYILEIPLKAALEPCAAVL
GAGAFPGWHESICPVCGARPAMAELSGDEGERRLCCSTCSYSWSFRRIKCPSCGCEDPQQLSYFTAGEGATRVDTCRACS
RYIKTRDTRKGGSEVPLEVEDLLTIHLDLLASREGFVRGK

Sequences:

>Translated_280_residues
MYSTERKIEALQSAVHRAPEYAAIAPFFAAVYHYQLQHEGGTGIGVELAGVDQEQRSSNGFPLISPSELRVDRLTLVTFL
AGLVTVLEAESTEGAAALRNIGEALQSGKLDPEPMLAAILERRRAPLDEASLALGVPGALLEYILEIPLKAALEPCAAVL
GAGAFPGWHESICPVCGARPAMAELSGDEGERRLCCSTCSYSWSFRRIKCPSCGCEDPQQLSYFTAGEGATRVDTCRACS
RYIKTRDTRKGGSEVPLEVEDLLTIHLDLLASREGFVRGK
>Mature_280_residues
MYSTERKIEALQSAVHRAPEYAAIAPFFAAVYHYQLQHEGGTGIGVELAGVDQEQRSSNGFPLISPSELRVDRLTLVTFL
AGLVTVLEAESTEGAAALRNIGEALQSGKLDPEPMLAAILERRRAPLDEASLALGVPGALLEYILEIPLKAALEPCAAVL
GAGAFPGWHESICPVCGARPAMAELSGDEGERRLCCSTCSYSWSFRRIKCPSCGCEDPQQLSYFTAGEGATRVDTCRACS
RYIKTRDTRKGGSEVPLEVEDLLTIHLDLLASREGFVRGK

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG3058

COG function: function code O; Uncharacterized protein involved in formate dehydrogenase formation

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006452 [H]

Pfam domain/function: PF04216 FdhE [H]

EC number: NA

Molecular weight: Translated: 30187; Mature: 30187

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSTERKIEALQSAVHRAPEYAAIAPFFAAVYHYQLQHEGGTGIGVELAGVDQEQRSSNG
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHCCCC
FPLISPSELRVDRLTLVTFLAGLVTVLEAESTEGAAALRNIGEALQSGKLDPEPMLAAIL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
ERRRAPLDEASLALGVPGALLEYILEIPLKAALEPCAAVLGAGAFPGWHESICPVCGARP
HHHCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHCHHHCCCC
AMAELSGDEGERRLCCSTCSYSWSFRRIKCPSCGCEDPQQLSYFTAGEGATRVDTCRACS
HHHHCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCHHHCCEEECCCCCCHHHHHHHHH
RYIKTRDTRKGGSEVPLEVEDLLTIHLDLLASREGFVRGK
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYSTERKIEALQSAVHRAPEYAAIAPFFAAVYHYQLQHEGGTGIGVELAGVDQEQRSSNG
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHCCCC
FPLISPSELRVDRLTLVTFLAGLVTVLEAESTEGAAALRNIGEALQSGKLDPEPMLAAIL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
ERRRAPLDEASLALGVPGALLEYILEIPLKAALEPCAAVLGAGAFPGWHESICPVCGARP
HHHCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHCHHHCCCC
AMAELSGDEGERRLCCSTCSYSWSFRRIKCPSCGCEDPQQLSYFTAGEGATRVDTCRACS
HHHHCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCHHHCCEEECCCCCCHHHHHHHHH
RYIKTRDTRKGGSEVPLEVEDLLTIHLDLLASREGFVRGK
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]