Click here to switch to the map view.

The map label for this gene is pilO

Identifier: 197117935

GI number: 197117935

Start: 1794143

End: 1794742

Strand: Direct

Name: pilO

Synonym: Gbem_1548

Alternate gene names: NA

Gene position: 1794143-1794742 (Clockwise)

Preceding gene: 197117934

Following gene: 197117936

Centisome position: 38.88

GC content: 56.5

Gene sequence:

>600_bases
ATGGATCCACAAATAGAAAAATTGCTCAAGCTCCCGACCAAGGAGAAGGTCGCCCTGTTGGCTTTGGTGCTGATAGTGGA
GGGGGTCGCCCTTTTCTATGGGCTGCACCGCCCGAAGATGGACGAGCTGAAGGAGCTCAAGGCGAAGCAGGAAGAACTCC
AGAAGCAGATCCAGGAAAGCCGCAGCATCGCCAACAACCTGCCGCGCTTCAAGGCCGAGTACGAGCAGCTCAAGAAGGAC
CTGGACAACGCCCTCACCGAGCTTCCCAACCAGAAGGAGATCCCGTCGCTTCTGACCAGCATCTCCACCCAGGGGAAAGG
GGCGGGGCTCGACTTCCTGCTCTTCAGGCCCAAGCCAGAGGTTCCCAAGGACTTCTACGCGGAAGTGCCGGTGGACATCG
CGGTGGCGGGGACCTACTACCAGGTCGCCGATTTCTTCCTTTCGGTGGGAAAATTGCCGCGCATCGTCAACATCACCAAC
GTAAACGTCTCTGATATCAAGGAGAGCAACGGGCGGACCACCCTGAAGGTCAGCTGCCTGGCCACCACCTTCCGCTTCCT
CGACCCTAAAGAGAAAAAAAATGAAAAAAAGCCTAAATAA

Upstream 100 bases:

>100_bases
CCAGATCGCGCAGCAGCTGTCCGCAACTGAAGCGGTGGGTTCCCCGTCAGCCGGGAAGAATCCTCCACCCAAACCAACTC
CCTGACGCAGAGGCCTTGCC

Downstream 100 bases:

>100_bases
CATCGCGCTGACGTTGCTGCTGCTGGCTCTTTGCGGCACCGGTTGCAAGAAGGAAGAGGCTCCGCCTCCACCTCCACCTC
CGCCCGCCGCACCCAAGCCT

Product: type IV pilus biogenesis protein PilO

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Membrane Protein; Tfp Pilus Assembly Protein PilO; Fimbrial Assembly Protein PilO; Fimbrial Type-4 Assembly Transmembrane Protein; Pilus Assembly Protein; Pilus Assembly Protein Pilo; Pilus Assembly Protein PilO-Like; PilO Type IV Pilus Assembly Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Fimbrial Type-IV Assembly Protein PilO; Pilus Iv Assembly Membrane Protein Pilo; Type IV Pilus Assembly Membrane Transmembrane Protein; Type 4 Fimbrial Biogenesis Protein; Fimbrial Assembly Protein; Pilo Protein

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MDPQIEKLLKLPTKEKVALLALVLIVEGVALFYGLHRPKMDELKELKAKQEELQKQIQESRSIANNLPRFKAEYEQLKKD
LDNALTELPNQKEIPSLLTSISTQGKGAGLDFLLFRPKPEVPKDFYAEVPVDIAVAGTYYQVADFFLSVGKLPRIVNITN
VNVSDIKESNGRTTLKVSCLATTFRFLDPKEKKNEKKPK

Sequences:

>Translated_199_residues
MDPQIEKLLKLPTKEKVALLALVLIVEGVALFYGLHRPKMDELKELKAKQEELQKQIQESRSIANNLPRFKAEYEQLKKD
LDNALTELPNQKEIPSLLTSISTQGKGAGLDFLLFRPKPEVPKDFYAEVPVDIAVAGTYYQVADFFLSVGKLPRIVNITN
VNVSDIKESNGRTTLKVSCLATTFRFLDPKEKKNEKKPK
>Mature_199_residues
MDPQIEKLLKLPTKEKVALLALVLIVEGVALFYGLHRPKMDELKELKAKQEELQKQIQESRSIANNLPRFKAEYEQLKKD
LDNALTELPNQKEIPSLLTSISTQGKGAGLDFLLFRPKPEVPKDFYAEVPVDIAVAGTYYQVADFFLSVGKLPRIVNITN
VNVSDIKESNGRTTLKVSCLATTFRFLDPKEKKNEKKPK

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22497; Mature: 22497

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPQIEKLLKLPTKEKVALLALVLIVEGVALFYGLHRPKMDELKELKAKQEELQKQIQES
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RSIANNLPRFKAEYEQLKKDLDNALTELPNQKEIPSLLTSISTQGKGAGLDFLLFRPKPE
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCC
VPKDFYAEVPVDIAVAGTYYQVADFFLSVGKLPRIVNITNVNVSDIKESNGRTTLKVSCL
CCHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCEEEEHHHH
ATTFRFLDPKEKKNEKKPK
HHHHHHCCCHHHCCCCCCC
>Mature Secondary Structure
MDPQIEKLLKLPTKEKVALLALVLIVEGVALFYGLHRPKMDELKELKAKQEELQKQIQES
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RSIANNLPRFKAEYEQLKKDLDNALTELPNQKEIPSLLTSISTQGKGAGLDFLLFRPKPE
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCC
VPKDFYAEVPVDIAVAGTYYQVADFFLSVGKLPRIVNITNVNVSDIKESNGRTTLKVSCL
CCHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCEEEEHHHH
ATTFRFLDPKEKKNEKKPK
HHHHHHCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA