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The map label for this gene is ybbE [H]

Identifier: 197117916

GI number: 197117916

Start: 1771294

End: 1772439

Strand: Direct

Name: ybbE [H]

Synonym: Gbem_1529

Alternate gene names: 197117916

Gene position: 1771294-1772439 (Clockwise)

Preceding gene: 197117915

Following gene: 197117917

Centisome position: 38.38

GC content: 64.14

Gene sequence:

>1146_bases
ATGCCTTTTTTCAGAAAAATCATCTGTAGCCTCCTACTCGTCCTCTGCGCCACCAGCGGCTATGCCGCCGACCTCGCCAG
GATCGACGCGCTGATCGGCGACGCCATAGGCCGCAACCTCATCGCCGGCGGCGTGGTACTGGTCGGGAGCCGGGACAGAA
TCCTCTTCGAGAAGGCCTATGGCCGGATCTCCCCCCTCCCCGACGCCCCCCTCATGGCGGTCGACACCATCTTCGACATC
GCTTCCCTCACCAAGGTCGCAGCAACCACCCCGTCGGTCCTGAAACTCGCCGAAGAGGGGAGGATCTCGCTGATCGATCC
CGTGGTGAAATGGTTTCCGGAGATGGCCGGGCATGGCAAGGATTCCATCCTGGTGCTGCACCTGCTCACCCACACCTCAG
GGCTCGATGACGTGCAGCTTTACGGGGATAGCCCGATCCGCTCGGCCATAGAGGGCGCCGCCACCCAGAAGCTCAAGGGG
GAGGTGGGTAGCCGCTTCCGGTACGCAGACCTCAACTTCATTCTCCTGGCGGAACTGGTGCGCAGGGCGACCGGCGCTCC
CCTGGACGTCTACACCCAGGCCTCCTTCTACCGCCCGCTCGGCATGACCGATACCTGCTTCAATCCCAAGAGGGAAGGGC
GCTTCTGCGCTACCCTGACCGAGGGGCGCATCCTCATGGGAGAGGTGCAGGACCCGCTCTGCAGGCAGTTGGGCGGAGTG
GCGGGGCACGCGGGGCTCTTCTCCACGGCGCGCGACCTGGGCAGGCTTTGCCGCATGATGTTGGGGGGAGGGACCCTCGA
CGGCAGGCGGGTGCTGGCGGCGAGGACCGTGGACCAGATGACCGCCCCCTACTTCTCGCGCGGCGGCGGCGTGGTGCGGG
GCCTGGGCTGGGACATCTCCTCCCCGTTCTCTTCTCCGCGCGGCAACGGCTTCTCCAGGATATCCTTCGGCCACACCGGC
TATTCGGGAACCTCTATCTGGATCGACCCGGCGTCAGACACCTTCGTGATACTTCTGACCGCCCGGCTGGACTACAAGAA
CACCCACGAGTTCAACAAGCTCAGAGGCGATCTTTCCACCGTGGCATCGCAGCTATTCGGCATTCCGCCCGAGCTTGGAG
AGATGGCCAGATTCAATGACGAGTAA

Upstream 100 bases:

>100_bases
GCGAGGGAAAGGTGCTGAAATCGGTCAACTTCAGGATGAACTAGCCCCCCGCGGGAGCTATCGCGTAATCAGAGCCTTCA
ACCCCGTTTCTCGGCGAGCC

Downstream 100 bases:

>100_bases
TTAATAGAAAAGGGCAAATACCTTGACACGTTGTACCCTTTATGCTAGCTTTTTCTACCGTTTTGCATGAAACTGGATCA
CTTTGCGCTCAGTTGTGAAC

Product: beta-lactamase superfamily metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MPFFRKIICSLLLVLCATSGYAADLARIDALIGDAIGRNLIAGGVVLVGSRDRILFEKAYGRISPLPDAPLMAVDTIFDI
ASLTKVAATTPSVLKLAEEGRISLIDPVVKWFPEMAGHGKDSILVLHLLTHTSGLDDVQLYGDSPIRSAIEGAATQKLKG
EVGSRFRYADLNFILLAELVRRATGAPLDVYTQASFYRPLGMTDTCFNPKREGRFCATLTEGRILMGEVQDPLCRQLGGV
AGHAGLFSTARDLGRLCRMMLGGGTLDGRRVLAARTVDQMTAPYFSRGGGVVRGLGWDISSPFSSPRGNGFSRISFGHTG
YSGTSIWIDPASDTFVILLTARLDYKNTHEFNKLRGDLSTVASQLFGIPPELGEMARFNDE

Sequences:

>Translated_381_residues
MPFFRKIICSLLLVLCATSGYAADLARIDALIGDAIGRNLIAGGVVLVGSRDRILFEKAYGRISPLPDAPLMAVDTIFDI
ASLTKVAATTPSVLKLAEEGRISLIDPVVKWFPEMAGHGKDSILVLHLLTHTSGLDDVQLYGDSPIRSAIEGAATQKLKG
EVGSRFRYADLNFILLAELVRRATGAPLDVYTQASFYRPLGMTDTCFNPKREGRFCATLTEGRILMGEVQDPLCRQLGGV
AGHAGLFSTARDLGRLCRMMLGGGTLDGRRVLAARTVDQMTAPYFSRGGGVVRGLGWDISSPFSSPRGNGFSRISFGHTG
YSGTSIWIDPASDTFVILLTARLDYKNTHEFNKLRGDLSTVASQLFGIPPELGEMARFNDE
>Mature_380_residues
PFFRKIICSLLLVLCATSGYAADLARIDALIGDAIGRNLIAGGVVLVGSRDRILFEKAYGRISPLPDAPLMAVDTIFDIA
SLTKVAATTPSVLKLAEEGRISLIDPVVKWFPEMAGHGKDSILVLHLLTHTSGLDDVQLYGDSPIRSAIEGAATQKLKGE
VGSRFRYADLNFILLAELVRRATGAPLDVYTQASFYRPLGMTDTCFNPKREGRFCATLTEGRILMGEVQDPLCRQLGGVA
GHAGLFSTARDLGRLCRMMLGGGTLDGRRVLAARTVDQMTAPYFSRGGGVVRGLGWDISSPFSSPRGNGFSRISFGHTGY
SGTSIWIDPASDTFVILLTARLDYKNTHEFNKLRGDLSTVASQLFGIPPELGEMARFNDE

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0214 family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=339, Percent_Identity=30.6784660766962, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1786574, Length=229, Percent_Identity=28.82096069869, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR022849 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 41181; Mature: 41050

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFFRKIICSLLLVLCATSGYAADLARIDALIGDAIGRNLIAGGVVLVGSRDRILFEKAY
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEHHHHC
GRISPLPDAPLMAVDTIFDIASLTKVAATTPSVLKLAEEGRISLIDPVVKWFPEMAGHGK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEHHHHHHHHHHHHHCCCC
DSILVLHLLTHTSGLDDVQLYGDSPIRSAIEGAATQKLKGEVGSRFRYADLNFILLAELV
CCEEEEEEEHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
RRATGAPLDVYTQASFYRPLGMTDTCFNPKREGRFCATLTEGRILMGEVQDPLCRQLGGV
HHHCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHCCC
AGHAGLFSTARDLGRLCRMMLGGGTLDGRRVLAARTVDQMTAPYFSRGGGVVRGLGWDIS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCHHHCCCCEEEECCCCCC
SPFSSPRGNGFSRISFGHTGYSGTSIWIDPASDTFVILLTARLDYKNTHEFNKLRGDLST
CCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHH
VASQLFGIPPELGEMARFNDE
HHHHHHCCCCCHHHHHHCCCC
>Mature Secondary Structure 
PFFRKIICSLLLVLCATSGYAADLARIDALIGDAIGRNLIAGGVVLVGSRDRILFEKAY
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEHHHHC
GRISPLPDAPLMAVDTIFDIASLTKVAATTPSVLKLAEEGRISLIDPVVKWFPEMAGHGK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEHHHHHHHHHHHHHCCCC
DSILVLHLLTHTSGLDDVQLYGDSPIRSAIEGAATQKLKGEVGSRFRYADLNFILLAELV
CCEEEEEEEHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
RRATGAPLDVYTQASFYRPLGMTDTCFNPKREGRFCATLTEGRILMGEVQDPLCRQLGGV
HHHCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHCCC
AGHAGLFSTARDLGRLCRMMLGGGTLDGRRVLAARTVDQMTAPYFSRGGGVVRGLGWDIS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCHHHCCCCEEEECCCCCC
SPFSSPRGNGFSRISFGHTGYSGTSIWIDPASDTFVILLTARLDYKNTHEFNKLRGDLST
CCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHH
VASQLFGIPPELGEMARFNDE
HHHHHHCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]