| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117906
Identifier: 197117906
GI number: 197117906
Start: 1758748
End: 1759797
Strand: Reverse
Name: 197117906
Synonym: Gbem_1519
Alternate gene names: NA
Gene position: 1759797-1758748 (Counterclockwise)
Preceding gene: 197117907
Following gene: 308535246
Centisome position: 38.13
GC content: 59.62
Gene sequence:
>1050_bases ATGCCCATGAAAATGTCCAACATCTTGCTGCTTTTGCTGGTAGTCGTGATCTGCGCGACCTTCTCGCTGCGCATCTTCCA GGGATTGGACGAGATGATGGGTGAGCAGTACTGGGTGGTCGACACGGCCCAGGGGGACCACGGCTGGTACGGCATGGGAC TCCTCCCCCACGTAAAGAAGGTCCCCAAGGAAGTGGTCCAGGCGGCGAACACCGACGCGGACGACAAGAACAACTACATC ATCTACGCCCAAAACGGCGACTTCGCTGGGAACTCCGTCTACGGCATCTGCCTCGGCATCCCGCTCATCATGTACTTGAT CTGGTTTGCCTTCATCCTCGGGTTCCCGGACCGCATCGACCCGTACCTTTTGCCGCGGCGCATCTTCACCCTGACCGTCA TCATCATGTGCTCCATCATCGTAAACCTGTTCCTGATGAGAATCGCCGCCGACTTCGCCCGCGACCCCATGTCCCGCATC GCCAACGTAGCCGGCAACCATGCCTCGCTTTTGTTCCACAACGCCGGCATCTGGTTCGCCATCCTCTTTTCGGCCCTTGG GACCCCGAACCACTCCGCCCGCGAGACCGCCGCGCCCGACAGCCGCAACTGGCAGACCCAGGCCAACGAGAAGTTCAACT GGATGTTCGTGCTCCTTTTCGCGGTGACGGTGCTGGAGGTGGCGCTGGTCAAGAACAAGCTCGCGCTCCCGGACGCAGCG GTGGACTACTCGGTCTGGATCATCCTGGTAGTCATCTTCATGCGCATGTTCGGCTTCTCCCCCAAGTATTGGGTGAAGCG CGGACGCGGCATCGGCATCATGATCGCCGGCACCCTGGTCACCCTCCCCATCTTCTACCTCCTGGAGCGTGCCACCGGCA CCCTCGGAGCGGGGTTCGCCTCCCCCATCCTTTCCAAGGCGCTAGGACCCGAAAACGCCAACATCGGATTGTCGCTGATG GTATCCATCTATCTCATCTTCTGGATGGAGTTCGCCGCAGCGATACGAATGAACGGACCGTCCAAATCATTGTCTCTGGG AAAACAGTAG
Upstream 100 bases:
>100_bases GTCGGGACCGGCCTGGAACACCATGTGGCTCTACGGCCTTTTCGCAGCCAACGCGGTCTCCATGTTCTGGACCACCCACA AGGAGTAGGAGGACGTCGTC
Downstream 100 bases:
>100_bases CTGCATCTGTTTCTAGAAGTAATTATTTTCAAAGGGAAAGCCGGACTTGGCTTTCCCTTTTTATTTATCAGCTCACACGT TTATACATCTGCAATAAAAC
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MPMKMSNILLLLLVVVICATFSLRIFQGLDEMMGEQYWVVDTAQGDHGWYGMGLLPHVKKVPKEVVQAANTDADDKNNYI IYAQNGDFAGNSVYGICLGIPLIMYLIWFAFILGFPDRIDPYLLPRRIFTLTVIIMCSIIVNLFLMRIAADFARDPMSRI ANVAGNHASLLFHNAGIWFAILFSALGTPNHSARETAAPDSRNWQTQANEKFNWMFVLLFAVTVLEVALVKNKLALPDAA VDYSVWIILVVIFMRMFGFSPKYWVKRGRGIGIMIAGTLVTLPIFYLLERATGTLGAGFASPILSKALGPENANIGLSLM VSIYLIFWMEFAAAIRMNGPSKSLSLGKQ
Sequences:
>Translated_349_residues MPMKMSNILLLLLVVVICATFSLRIFQGLDEMMGEQYWVVDTAQGDHGWYGMGLLPHVKKVPKEVVQAANTDADDKNNYI IYAQNGDFAGNSVYGICLGIPLIMYLIWFAFILGFPDRIDPYLLPRRIFTLTVIIMCSIIVNLFLMRIAADFARDPMSRI ANVAGNHASLLFHNAGIWFAILFSALGTPNHSARETAAPDSRNWQTQANEKFNWMFVLLFAVTVLEVALVKNKLALPDAA VDYSVWIILVVIFMRMFGFSPKYWVKRGRGIGIMIAGTLVTLPIFYLLERATGTLGAGFASPILSKALGPENANIGLSLM VSIYLIFWMEFAAAIRMNGPSKSLSLGKQ >Mature_348_residues PMKMSNILLLLLVVVICATFSLRIFQGLDEMMGEQYWVVDTAQGDHGWYGMGLLPHVKKVPKEVVQAANTDADDKNNYII YAQNGDFAGNSVYGICLGIPLIMYLIWFAFILGFPDRIDPYLLPRRIFTLTVIIMCSIIVNLFLMRIAADFARDPMSRIA NVAGNHASLLFHNAGIWFAILFSALGTPNHSARETAAPDSRNWQTQANEKFNWMFVLLFAVTVLEVALVKNKLALPDAAV DYSVWIILVVIFMRMFGFSPKYWVKRGRGIGIMIAGTLVTLPIFYLLERATGTLGAGFASPILSKALGPENANIGLSLMV SIYLIFWMEFAAAIRMNGPSKSLSLGKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38803; Mature: 38672
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKMSNILLLLLVVVICATFSLRIFQGLDEMMGEQYWVVDTAQGDHGWYGMGLLPHVKK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCHHHHH VPKEVVQAANTDADDKNNYIIYAQNGDFAGNSVYGICLGIPLIMYLIWFAFILGFPDRID HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC PYLLPRRIFTLTVIIMCSIIVNLFLMRIAADFARDPMSRIANVAGNHASLLFHNAGIWFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEECCCHHHH ILFSALGTPNHSARETAAPDSRNWQTQANEKFNWMFVLLFAVTVLEVALVKNKLALPDAA HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VDYSVWIILVVIFMRMFGFSPKYWVKRGRGIGIMIAGTLVTLPIFYLLERATGTLGAGFA HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHH SPILSKALGPENANIGLSLMVSIYLIFWMEFAAAIRMNGPSKSLSLGKQ HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PMKMSNILLLLLVVVICATFSLRIFQGLDEMMGEQYWVVDTAQGDHGWYGMGLLPHVKK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCHHHHH VPKEVVQAANTDADDKNNYIIYAQNGDFAGNSVYGICLGIPLIMYLIWFAFILGFPDRID HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC PYLLPRRIFTLTVIIMCSIIVNLFLMRIAADFARDPMSRIANVAGNHASLLFHNAGIWFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEECCCHHHH ILFSALGTPNHSARETAAPDSRNWQTQANEKFNWMFVLLFAVTVLEVALVKNKLALPDAA HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VDYSVWIILVVIFMRMFGFSPKYWVKRGRGIGIMIAGTLVTLPIFYLLERATGTLGAGFA HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHH SPILSKALGPENANIGLSLMVSIYLIFWMEFAAAIRMNGPSKSLSLGKQ HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA