Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197117906

Identifier: 197117906

GI number: 197117906

Start: 1758748

End: 1759797

Strand: Reverse

Name: 197117906

Synonym: Gbem_1519

Alternate gene names: NA

Gene position: 1759797-1758748 (Counterclockwise)

Preceding gene: 197117907

Following gene: 308535246

Centisome position: 38.13

GC content: 59.62

Gene sequence:

>1050_bases
ATGCCCATGAAAATGTCCAACATCTTGCTGCTTTTGCTGGTAGTCGTGATCTGCGCGACCTTCTCGCTGCGCATCTTCCA
GGGATTGGACGAGATGATGGGTGAGCAGTACTGGGTGGTCGACACGGCCCAGGGGGACCACGGCTGGTACGGCATGGGAC
TCCTCCCCCACGTAAAGAAGGTCCCCAAGGAAGTGGTCCAGGCGGCGAACACCGACGCGGACGACAAGAACAACTACATC
ATCTACGCCCAAAACGGCGACTTCGCTGGGAACTCCGTCTACGGCATCTGCCTCGGCATCCCGCTCATCATGTACTTGAT
CTGGTTTGCCTTCATCCTCGGGTTCCCGGACCGCATCGACCCGTACCTTTTGCCGCGGCGCATCTTCACCCTGACCGTCA
TCATCATGTGCTCCATCATCGTAAACCTGTTCCTGATGAGAATCGCCGCCGACTTCGCCCGCGACCCCATGTCCCGCATC
GCCAACGTAGCCGGCAACCATGCCTCGCTTTTGTTCCACAACGCCGGCATCTGGTTCGCCATCCTCTTTTCGGCCCTTGG
GACCCCGAACCACTCCGCCCGCGAGACCGCCGCGCCCGACAGCCGCAACTGGCAGACCCAGGCCAACGAGAAGTTCAACT
GGATGTTCGTGCTCCTTTTCGCGGTGACGGTGCTGGAGGTGGCGCTGGTCAAGAACAAGCTCGCGCTCCCGGACGCAGCG
GTGGACTACTCGGTCTGGATCATCCTGGTAGTCATCTTCATGCGCATGTTCGGCTTCTCCCCCAAGTATTGGGTGAAGCG
CGGACGCGGCATCGGCATCATGATCGCCGGCACCCTGGTCACCCTCCCCATCTTCTACCTCCTGGAGCGTGCCACCGGCA
CCCTCGGAGCGGGGTTCGCCTCCCCCATCCTTTCCAAGGCGCTAGGACCCGAAAACGCCAACATCGGATTGTCGCTGATG
GTATCCATCTATCTCATCTTCTGGATGGAGTTCGCCGCAGCGATACGAATGAACGGACCGTCCAAATCATTGTCTCTGGG
AAAACAGTAG

Upstream 100 bases:

>100_bases
GTCGGGACCGGCCTGGAACACCATGTGGCTCTACGGCCTTTTCGCAGCCAACGCGGTCTCCATGTTCTGGACCACCCACA
AGGAGTAGGAGGACGTCGTC

Downstream 100 bases:

>100_bases
CTGCATCTGTTTCTAGAAGTAATTATTTTCAAAGGGAAAGCCGGACTTGGCTTTCCCTTTTTATTTATCAGCTCACACGT
TTATACATCTGCAATAAAAC

Product: membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MPMKMSNILLLLLVVVICATFSLRIFQGLDEMMGEQYWVVDTAQGDHGWYGMGLLPHVKKVPKEVVQAANTDADDKNNYI
IYAQNGDFAGNSVYGICLGIPLIMYLIWFAFILGFPDRIDPYLLPRRIFTLTVIIMCSIIVNLFLMRIAADFARDPMSRI
ANVAGNHASLLFHNAGIWFAILFSALGTPNHSARETAAPDSRNWQTQANEKFNWMFVLLFAVTVLEVALVKNKLALPDAA
VDYSVWIILVVIFMRMFGFSPKYWVKRGRGIGIMIAGTLVTLPIFYLLERATGTLGAGFASPILSKALGPENANIGLSLM
VSIYLIFWMEFAAAIRMNGPSKSLSLGKQ

Sequences:

>Translated_349_residues
MPMKMSNILLLLLVVVICATFSLRIFQGLDEMMGEQYWVVDTAQGDHGWYGMGLLPHVKKVPKEVVQAANTDADDKNNYI
IYAQNGDFAGNSVYGICLGIPLIMYLIWFAFILGFPDRIDPYLLPRRIFTLTVIIMCSIIVNLFLMRIAADFARDPMSRI
ANVAGNHASLLFHNAGIWFAILFSALGTPNHSARETAAPDSRNWQTQANEKFNWMFVLLFAVTVLEVALVKNKLALPDAA
VDYSVWIILVVIFMRMFGFSPKYWVKRGRGIGIMIAGTLVTLPIFYLLERATGTLGAGFASPILSKALGPENANIGLSLM
VSIYLIFWMEFAAAIRMNGPSKSLSLGKQ
>Mature_348_residues
PMKMSNILLLLLVVVICATFSLRIFQGLDEMMGEQYWVVDTAQGDHGWYGMGLLPHVKKVPKEVVQAANTDADDKNNYII
YAQNGDFAGNSVYGICLGIPLIMYLIWFAFILGFPDRIDPYLLPRRIFTLTVIIMCSIIVNLFLMRIAADFARDPMSRIA
NVAGNHASLLFHNAGIWFAILFSALGTPNHSARETAAPDSRNWQTQANEKFNWMFVLLFAVTVLEVALVKNKLALPDAAV
DYSVWIILVVIFMRMFGFSPKYWVKRGRGIGIMIAGTLVTLPIFYLLERATGTLGAGFASPILSKALGPENANIGLSLMV
SIYLIFWMEFAAAIRMNGPSKSLSLGKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38803; Mature: 38672

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMKMSNILLLLLVVVICATFSLRIFQGLDEMMGEQYWVVDTAQGDHGWYGMGLLPHVKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCHHHHH
VPKEVVQAANTDADDKNNYIIYAQNGDFAGNSVYGICLGIPLIMYLIWFAFILGFPDRID
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PYLLPRRIFTLTVIIMCSIIVNLFLMRIAADFARDPMSRIANVAGNHASLLFHNAGIWFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEECCCHHHH
ILFSALGTPNHSARETAAPDSRNWQTQANEKFNWMFVLLFAVTVLEVALVKNKLALPDAA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VDYSVWIILVVIFMRMFGFSPKYWVKRGRGIGIMIAGTLVTLPIFYLLERATGTLGAGFA
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHH
SPILSKALGPENANIGLSLMVSIYLIFWMEFAAAIRMNGPSKSLSLGKQ
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PMKMSNILLLLLVVVICATFSLRIFQGLDEMMGEQYWVVDTAQGDHGWYGMGLLPHVKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCHHHHH
VPKEVVQAANTDADDKNNYIIYAQNGDFAGNSVYGICLGIPLIMYLIWFAFILGFPDRID
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PYLLPRRIFTLTVIIMCSIIVNLFLMRIAADFARDPMSRIANVAGNHASLLFHNAGIWFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEECCCHHHH
ILFSALGTPNHSARETAAPDSRNWQTQANEKFNWMFVLLFAVTVLEVALVKNKLALPDAA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VDYSVWIILVVIFMRMFGFSPKYWVKRGRGIGIMIAGTLVTLPIFYLLERATGTLGAGFA
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHH
SPILSKALGPENANIGLSLMVSIYLIFWMEFAAAIRMNGPSKSLSLGKQ
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA