| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117896
Identifier: 197117896
GI number: 197117896
Start: 1748211
End: 1748678
Strand: Direct
Name: 197117896
Synonym: Gbem_1509
Alternate gene names: NA
Gene position: 1748211-1748678 (Clockwise)
Preceding gene: 197117895
Following gene: 197117897
Centisome position: 37.88
GC content: 63.68
Gene sequence:
>468_bases ATGGACTCGCGCGACATGGCACTCAGAAAGGAAGGGGACGCAAGGGGTTACTACGAGCGCTGCGGCGCCGAGGCCGGGAT CGCCGGCTTCACCTCTATCTTCAGAATGTTCACCGAGGATGAGACGAGGCACGCCGACGCCCTGCGTGCGTTGCAAGACG GGGCGCGGGTGGAGCTGCCTGCCTCTGCCACCTTGGACGGCGCGAGGAGGATACTGCGCCGGCTCGCCGTGCAGGAAGGT GTCCTTTCCTTCACCGGGGACCTGGGGTGCTACAAAAGCGCCATGCAGTTCGAGGCGGTGAGCGCACGCGCTTGCGGCAA ACTGGCCGAAGAGGCCAGCGGCTGGGAGCGGGAACTCTTTTTGAGAATAGCGGCTGACGACGAGATCCATTTCACCCTGC TGGAGGAGATGCACGAGCTGCTGCAGGTATACGGCGAGGAACCTGGAGGCATGTGCGATGCCGGTTGA
Upstream 100 bases:
>100_bases CCCCGTTTTTTTTGCCCAAAAAAGTCTCCAACCTTTAGAAATGCCGTTTTTTTCTGTTACTGTTTTCCAGCCGTAAATGA TCTCTTTGAGGGAGGGTGAT
Downstream 100 bases:
>100_bases GATAGACATAAGGAAGGTGCTGGATACCGCTACAACAGCCGCTCGCGAGGCCGGTGCCCTGCAGAAGGAGCGGCTTTGGA GCGAGCACACCCTCTCCTAC
Product: ferritin-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MDSRDMALRKEGDARGYYERCGAEAGIAGFTSIFRMFTEDETRHADALRALQDGARVELPASATLDGARRILRRLAVQEG VLSFTGDLGCYKSAMQFEAVSARACGKLAEEASGWERELFLRIAADDEIHFTLLEEMHELLQVYGEEPGGMCDAG
Sequences:
>Translated_155_residues MDSRDMALRKEGDARGYYERCGAEAGIAGFTSIFRMFTEDETRHADALRALQDGARVELPASATLDGARRILRRLAVQEG VLSFTGDLGCYKSAMQFEAVSARACGKLAEEASGWERELFLRIAADDEIHFTLLEEMHELLQVYGEEPGGMCDAG >Mature_155_residues MDSRDMALRKEGDARGYYERCGAEAGIAGFTSIFRMFTEDETRHADALRALQDGARVELPASATLDGARRILRRLAVQEG VLSFTGDLGCYKSAMQFEAVSARACGKLAEEASGWERELFLRIAADDEIHFTLLEEMHELLQVYGEEPGGMCDAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17087; Mature: 17087
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSRDMALRKEGDARGYYERCGAEAGIAGFTSIFRMFTEDETRHADALRALQDGARVELP CCCCCCHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECC ASATLDGARRILRRLAVQEGVLSFTGDLGCYKSAMQFEAVSARACGKLAEEASGWERELF CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHE LRIAADDEIHFTLLEEMHELLQVYGEEPGGMCDAG EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDSRDMALRKEGDARGYYERCGAEAGIAGFTSIFRMFTEDETRHADALRALQDGARVELP CCCCCCHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECC ASATLDGARRILRRLAVQEGVLSFTGDLGCYKSAMQFEAVSARACGKLAEEASGWERELF CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHE LRIAADDEIHFTLLEEMHELLQVYGEEPGGMCDAG EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA