Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197117896

Identifier: 197117896

GI number: 197117896

Start: 1748211

End: 1748678

Strand: Direct

Name: 197117896

Synonym: Gbem_1509

Alternate gene names: NA

Gene position: 1748211-1748678 (Clockwise)

Preceding gene: 197117895

Following gene: 197117897

Centisome position: 37.88

GC content: 63.68

Gene sequence:

>468_bases
ATGGACTCGCGCGACATGGCACTCAGAAAGGAAGGGGACGCAAGGGGTTACTACGAGCGCTGCGGCGCCGAGGCCGGGAT
CGCCGGCTTCACCTCTATCTTCAGAATGTTCACCGAGGATGAGACGAGGCACGCCGACGCCCTGCGTGCGTTGCAAGACG
GGGCGCGGGTGGAGCTGCCTGCCTCTGCCACCTTGGACGGCGCGAGGAGGATACTGCGCCGGCTCGCCGTGCAGGAAGGT
GTCCTTTCCTTCACCGGGGACCTGGGGTGCTACAAAAGCGCCATGCAGTTCGAGGCGGTGAGCGCACGCGCTTGCGGCAA
ACTGGCCGAAGAGGCCAGCGGCTGGGAGCGGGAACTCTTTTTGAGAATAGCGGCTGACGACGAGATCCATTTCACCCTGC
TGGAGGAGATGCACGAGCTGCTGCAGGTATACGGCGAGGAACCTGGAGGCATGTGCGATGCCGGTTGA

Upstream 100 bases:

>100_bases
CCCCGTTTTTTTTGCCCAAAAAAGTCTCCAACCTTTAGAAATGCCGTTTTTTTCTGTTACTGTTTTCCAGCCGTAAATGA
TCTCTTTGAGGGAGGGTGAT

Downstream 100 bases:

>100_bases
GATAGACATAAGGAAGGTGCTGGATACCGCTACAACAGCCGCTCGCGAGGCCGGTGCCCTGCAGAAGGAGCGGCTTTGGA
GCGAGCACACCCTCTCCTAC

Product: ferritin-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDSRDMALRKEGDARGYYERCGAEAGIAGFTSIFRMFTEDETRHADALRALQDGARVELPASATLDGARRILRRLAVQEG
VLSFTGDLGCYKSAMQFEAVSARACGKLAEEASGWERELFLRIAADDEIHFTLLEEMHELLQVYGEEPGGMCDAG

Sequences:

>Translated_155_residues
MDSRDMALRKEGDARGYYERCGAEAGIAGFTSIFRMFTEDETRHADALRALQDGARVELPASATLDGARRILRRLAVQEG
VLSFTGDLGCYKSAMQFEAVSARACGKLAEEASGWERELFLRIAADDEIHFTLLEEMHELLQVYGEEPGGMCDAG
>Mature_155_residues
MDSRDMALRKEGDARGYYERCGAEAGIAGFTSIFRMFTEDETRHADALRALQDGARVELPASATLDGARRILRRLAVQEG
VLSFTGDLGCYKSAMQFEAVSARACGKLAEEASGWERELFLRIAADDEIHFTLLEEMHELLQVYGEEPGGMCDAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17087; Mature: 17087

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRDMALRKEGDARGYYERCGAEAGIAGFTSIFRMFTEDETRHADALRALQDGARVELP
CCCCCCHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECC
ASATLDGARRILRRLAVQEGVLSFTGDLGCYKSAMQFEAVSARACGKLAEEASGWERELF
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHE
LRIAADDEIHFTLLEEMHELLQVYGEEPGGMCDAG
EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDSRDMALRKEGDARGYYERCGAEAGIAGFTSIFRMFTEDETRHADALRALQDGARVELP
CCCCCCHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECC
ASATLDGARRILRRLAVQEGVLSFTGDLGCYKSAMQFEAVSARACGKLAEEASGWERELF
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHE
LRIAADDEIHFTLLEEMHELLQVYGEEPGGMCDAG
EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA