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The map label for this gene is 197117886

Identifier: 197117886

GI number: 197117886

Start: 1733696

End: 1734541

Strand: Reverse

Name: 197117886

Synonym: Gbem_1499

Alternate gene names: NA

Gene position: 1734541-1733696 (Counterclockwise)

Preceding gene: 197117899

Following gene: 197117878

Centisome position: 37.58

GC content: 62.53

Gene sequence:

>846_bases
ATGTCAGATAGATACGTCGAGAAAAATTTCCTCTATTTGCTGCTTTTTTCGGCACTACTCCACGTAGGTGCCTTTTTAAT
TATCACGACCCTGCCCCAAGAACAACCCAAAACAGCTCCAGAGCCAACTTTCGTCGACCTGACCGACCTCCCGGACCTGC
AGCCCCAGCCGAAGCTGCCGAAAAAAGCGGCACCCAAAACGGAGATCAAGAGGTATGCGGAGACGCCGCAGCGGGTGGCG
AAGGAGATGGCACCCAAAGCAAAGGGCGCGTTCGACAGGCTGACGCCGTCGCTGCCGCGCCTGCCCAACTTGCGCCCCGC
CCCCCCAGGATCCGCCCTGCCTGCGCCGCAGCCGGAGGAGACGGCCAAAGCGCCGGTTTCGCGCGGCGAGGGGATCCTGA
AGCCGCGCGCTCAGCAGCTGCCCGACCGTTCCCGCCTCTTCCCCAGCGCCAACAGGCTCGCCCGACTGGAGGAGAGCTAC
CGGGAGAAGTACAGGAGCGAGGTCGAGGAGGGAGAGACCCGCTTCCTCAACACCGAGGACATCCAGTTCGGTTCCTTCCT
GCGCCGCCTGGAAACCGCGGTCTACGGCGTCTGGCATTACCCGCAGGCGGCGCTTTTGCGCGGCATCGAAGGGACCACGC
CGGTCAAGATCACCTTCAACAGGAAAGGAGAGATCGTCAACATCGACCTCCTGGAGAGTTCCGGGAGCAAGATCCTCGAC
GACGAGGTATTCAGGGCCTTGAACGCGCTGGGCCCCATCGGCTCCTTCCCCAAGGGGTACCGCGGCGAAACCTTCAAGCT
GATCGCCTTCTTCCACTACGGCAACGGCGGCGGCAGGCTCCGTTAG

Upstream 100 bases:

>100_bases
CTATCTTCTACCATCACAAAGCCTGCGGGGGCTTCCCCGCACGAGGCCAGCCGGCCGAGATCTGCACAAAAAATAAACAC
CCGGCCATGGGTGGAGCTAC

Downstream 100 bases:

>100_bases
CAGCCAAGCCTCTTCCTTAAAAACGCCAGAAACTCCCCGTTGAACTCGTCCCTTTTCAGCGCCATATCCACCGTCGCCTT
CAAAAATCCCAGCTTGTCCC

Product: TonB-like protein

Products: NA

Alternate protein names: NB-Like; NB-Like Protein; NB-Dependent Receptor; Periplasmic Protein nB; Protein nB

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSDRYVEKNFLYLLLFSALLHVGAFLIITTLPQEQPKTAPEPTFVDLTDLPDLQPQPKLPKKAAPKTEIKRYAETPQRVA
KEMAPKAKGAFDRLTPSLPRLPNLRPAPPGSALPAPQPEETAKAPVSRGEGILKPRAQQLPDRSRLFPSANRLARLEESY
REKYRSEVEEGETRFLNTEDIQFGSFLRRLETAVYGVWHYPQAALLRGIEGTTPVKITFNRKGEIVNIDLLESSGSKILD
DEVFRALNALGPIGSFPKGYRGETFKLIAFFHYGNGGGRLR

Sequences:

>Translated_281_residues
MSDRYVEKNFLYLLLFSALLHVGAFLIITTLPQEQPKTAPEPTFVDLTDLPDLQPQPKLPKKAAPKTEIKRYAETPQRVA
KEMAPKAKGAFDRLTPSLPRLPNLRPAPPGSALPAPQPEETAKAPVSRGEGILKPRAQQLPDRSRLFPSANRLARLEESY
REKYRSEVEEGETRFLNTEDIQFGSFLRRLETAVYGVWHYPQAALLRGIEGTTPVKITFNRKGEIVNIDLLESSGSKILD
DEVFRALNALGPIGSFPKGYRGETFKLIAFFHYGNGGGRLR
>Mature_280_residues
SDRYVEKNFLYLLLFSALLHVGAFLIITTLPQEQPKTAPEPTFVDLTDLPDLQPQPKLPKKAAPKTEIKRYAETPQRVAK
EMAPKAKGAFDRLTPSLPRLPNLRPAPPGSALPAPQPEETAKAPVSRGEGILKPRAQQLPDRSRLFPSANRLARLEESYR
EKYRSEVEEGETRFLNTEDIQFGSFLRRLETAVYGVWHYPQAALLRGIEGTTPVKITFNRKGEIVNIDLLESSGSKILDD
EVFRALNALGPIGSFPKGYRGETFKLIAFFHYGNGGGRLR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31468; Mature: 31336

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRYVEKNFLYLLLFSALLHVGAFLIITTLPQEQPKTAPEPTFVDLTDLPDLQPQPKLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
KKAAPKTEIKRYAETPQRVAKEMAPKAKGAFDRLTPSLPRLPNLRPAPPGSALPAPQPEE
CCCCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
TAKAPVSRGEGILKPRAQQLPDRSRLFPSANRLARLEESYREKYRSEVEEGETRFLNTED
HHHCCHHCCCCCCCCHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC
IQFGSFLRRLETAVYGVWHYPQAALLRGIEGTTPVKITFNRKGEIVNIDLLESSGSKILD
CHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCCCCHH
DEVFRALNALGPIGSFPKGYRGETFKLIAFFHYGNGGGRLR
HHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
SDRYVEKNFLYLLLFSALLHVGAFLIITTLPQEQPKTAPEPTFVDLTDLPDLQPQPKLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
KKAAPKTEIKRYAETPQRVAKEMAPKAKGAFDRLTPSLPRLPNLRPAPPGSALPAPQPEE
CCCCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
TAKAPVSRGEGILKPRAQQLPDRSRLFPSANRLARLEESYREKYRSEVEEGETRFLNTED
HHHCCHHCCCCCCCCHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC
IQFGSFLRRLETAVYGVWHYPQAALLRGIEGTTPVKITFNRKGEIVNIDLLESSGSKILD
CHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCCCCCHH
DEVFRALNALGPIGSFPKGYRGETFKLIAFFHYGNGGGRLR
HHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA