| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yggT [C]
Identifier: 197117879
GI number: 197117879
Start: 1729847
End: 1730176
Strand: Direct
Name: yggT [C]
Synonym: Gbem_1492
Alternate gene names: 197117879
Gene position: 1729847-1730176 (Clockwise)
Preceding gene: 308535244
Following gene: 197117880
Centisome position: 37.48
GC content: 52.42
Gene sequence:
>330_bases ATGATACTGCTAGCCAACATTCTCTTGGCCCTTGCAAAGATAGTAGAGCTGGCAAGCGGTGTTCTCACCATCTATAAATA CATACTGCTGGCAAGCGTCATCATCTCCTGGATCAACGCGGATCCCTACAACCCCATCGTGAACTTCATCTACCGCGTCA CGGAACCGGCTTTGCAACGGATCCGCCGCTACATGCCCAACACCGGAATGCTCGACCTGTCGCCGCTGGTGCTCTTCGTC CTCATCTACCTGGTGCAGATCATCGTCTTCGACACCGCTTACACTTATCTGATGCTCTTCAGCAACCAACTCAAGGGACA GGCTCTATGA
Upstream 100 bases:
>100_bases TGCCGCAATAGCAGTGCCTGCACCGGGCAGCTACCCTTGACAAATAAAGCCGATTTCTGTATAGCTTTGCAAGCCGAAAA CCAAGCTTTGAGGGGGATAA
Downstream 100 bases:
>100_bases AAATATCCCCCATGGACATCCAGCAGCAGCAGTTCAAGGGAAAGATGCTGGGAGGGCTCGACCCTGAGGACGTGGATTCT TTCCTGCAGTCGGTCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: YGGT Family Protein; Integral Membrane Protein
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MILLANILLALAKIVELASGVLTIYKYILLASVIISWINADPYNPIVNFIYRVTEPALQRIRRYMPNTGMLDLSPLVLFV LIYLVQIIVFDTAYTYLMLFSNQLKGQAL
Sequences:
>Translated_109_residues MILLANILLALAKIVELASGVLTIYKYILLASVIISWINADPYNPIVNFIYRVTEPALQRIRRYMPNTGMLDLSPLVLFV LIYLVQIIVFDTAYTYLMLFSNQLKGQAL >Mature_109_residues MILLANILLALAKIVELASGVLTIYKYILLASVIISWINADPYNPIVNFIYRVTEPALQRIRRYMPNTGMLDLSPLVLFV LIYLVQIIVFDTAYTYLMLFSNQLKGQAL
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12410; Mature: 12410
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLANILLALAKIVELASGVLTIYKYILLASVIISWINADPYNPIVNFIYRVTEPALQR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IRRYMPNTGMLDLSPLVLFVLIYLVQIIVFDTAYTYLMLFSNQLKGQAL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MILLANILLALAKIVELASGVLTIYKYILLASVIISWINADPYNPIVNFIYRVTEPALQR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH IRRYMPNTGMLDLSPLVLFVLIYLVQIIVFDTAYTYLMLFSNQLKGQAL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA