Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is yggT [C]

Identifier: 197117879

GI number: 197117879

Start: 1729847

End: 1730176

Strand: Direct

Name: yggT [C]

Synonym: Gbem_1492

Alternate gene names: 197117879

Gene position: 1729847-1730176 (Clockwise)

Preceding gene: 308535244

Following gene: 197117880

Centisome position: 37.48

GC content: 52.42

Gene sequence:

>330_bases
ATGATACTGCTAGCCAACATTCTCTTGGCCCTTGCAAAGATAGTAGAGCTGGCAAGCGGTGTTCTCACCATCTATAAATA
CATACTGCTGGCAAGCGTCATCATCTCCTGGATCAACGCGGATCCCTACAACCCCATCGTGAACTTCATCTACCGCGTCA
CGGAACCGGCTTTGCAACGGATCCGCCGCTACATGCCCAACACCGGAATGCTCGACCTGTCGCCGCTGGTGCTCTTCGTC
CTCATCTACCTGGTGCAGATCATCGTCTTCGACACCGCTTACACTTATCTGATGCTCTTCAGCAACCAACTCAAGGGACA
GGCTCTATGA

Upstream 100 bases:

>100_bases
TGCCGCAATAGCAGTGCCTGCACCGGGCAGCTACCCTTGACAAATAAAGCCGATTTCTGTATAGCTTTGCAAGCCGAAAA
CCAAGCTTTGAGGGGGATAA

Downstream 100 bases:

>100_bases
AAATATCCCCCATGGACATCCAGCAGCAGCAGTTCAAGGGAAAGATGCTGGGAGGGCTCGACCCTGAGGACGTGGATTCT
TTCCTGCAGTCGGTCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: YGGT Family Protein; Integral Membrane Protein

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MILLANILLALAKIVELASGVLTIYKYILLASVIISWINADPYNPIVNFIYRVTEPALQRIRRYMPNTGMLDLSPLVLFV
LIYLVQIIVFDTAYTYLMLFSNQLKGQAL

Sequences:

>Translated_109_residues
MILLANILLALAKIVELASGVLTIYKYILLASVIISWINADPYNPIVNFIYRVTEPALQRIRRYMPNTGMLDLSPLVLFV
LIYLVQIIVFDTAYTYLMLFSNQLKGQAL
>Mature_109_residues
MILLANILLALAKIVELASGVLTIYKYILLASVIISWINADPYNPIVNFIYRVTEPALQRIRRYMPNTGMLDLSPLVLFV
LIYLVQIIVFDTAYTYLMLFSNQLKGQAL

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12410; Mature: 12410

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLANILLALAKIVELASGVLTIYKYILLASVIISWINADPYNPIVNFIYRVTEPALQR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IRRYMPNTGMLDLSPLVLFVLIYLVQIIVFDTAYTYLMLFSNQLKGQAL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MILLANILLALAKIVELASGVLTIYKYILLASVIISWINADPYNPIVNFIYRVTEPALQR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IRRYMPNTGMLDLSPLVLFVLIYLVQIIVFDTAYTYLMLFSNQLKGQAL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA