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The map label for this gene is bamD [H]

Identifier: 197117833

GI number: 197117833

Start: 1669914

End: 1671065

Strand: Direct

Name: bamD [H]

Synonym: Gbem_1446

Alternate gene names: 197117833

Gene position: 1669914-1671065 (Clockwise)

Preceding gene: 197117832

Following gene: 197117834

Centisome position: 36.18

GC content: 60.76

Gene sequence:

>1152_bases
GTGGAAACCGTGACTCCATTCAAAGAGATAATCGATGTCATCAAGGAAAAGGGCGGCGATTCGCTCAAATACTGCTACCA
GTGCGGTCTTTGCGACTCGGTCTGCCCCTGGAACCGGGTACGGCAGTTCAGCATGCGCAAGGTGGTCAGGCAGGGGGTCT
TCGGCCTCACCGAGATCGAGCAGGAAGAGATCTGGCGCTGCAGCACCTGCGGCACCTGTCCCAGCCGCTGTCCCAGGGGT
GTGAACCAGATCGAGGCGGGAATCGCCCTGAGGACGATGGGGGCGGAATACGACGTCTACCCCGGCCACGTAAGCACCAT
CCGGAACGTGGTGGCGAGCCTGACCAGCGAGGGCAACTCCATTGGCGGCGAGCGCGCCAAAAGGGGCGACTGGGCCAAGG
AGCTCCCGGTGAAGCAGTACGAGGAGGGGATGGAAGCCCTCTACTTCACCGGCTGCTACCTAAGCTATGACCCCAGGATG
AGGAAGGTGGCCCAGGCCACCGCGACCATCCTCAACAAGGCGGGGGTGAAGTTCGGGATCCTCGGCAACAAGGAAACCTG
CTGCGGGGAAAGCATCCGGAAGACCGGCAACGAGGAGCTTTTCAAGAAACTCGCCAAGGAGAACATCAGGAACTTCATCG
ACAACGGCGTCAAGAAGGTGATCGTCTCCTCGCCGCATTGCTACCACACCTTCAAGAACGAGTACCCCGAGTTCATGGTG
AACTTCGAGGTGGTCTTCATCTCCCAGCTGATCGAGCAGCTCATCAACGAGGGGAGGCTCACCATCAAGGGGGAATTCGC
CAAGAAGGTCACCTATCACGACCCCTGCTACTTGGGGCGTCACAACGGCGTCTACGACGAACCGAGGAACGTGCTGAAAA
AGGTGCCGGGCCTCCAATTCACCGAGATGGCCGACAACCGCGAATCCGCCCTTTGCTGCGGCGGTGGCGGCGGCAGGATC
TGGATGGAGACCCCGAAGGAGGAGCGCTTCGCCGACCTCAGGCTCAGGCAGGCGGTAAACGCCGGGGCCGAGGTGCTCGC
CACCTCCTGCCCCTACTGCATCACCAACTTCACCGACTCGAGCCTAGACCTGGCCGACGACGAGAAGGTGGAGGTGAAGG
ATCTGACCGAGATCATCGCCGAGGTGATCTGA

Upstream 100 bases:

>100_bases
CCAGTCACTGATGAAGAGGTTCGGGACCGAGAAGCTCCTCGATACGGTGGGCCAGATCACCAAAGGCTAACGACGCTAAC
AACAAAGGACGGGTGCTATC

Downstream 100 bases:

>100_bases
CCACCGTCACTTGCATCCAACGAACTCTAGTTGAAGGAAAACTTCTATGAATACCGCAGAGAGAAATATTGGTGACGTAC
TCATTGTCGGTGGAGGGATC

Product: iron-sulfur cluster-binding oxidoreductase benzoyl-CoA reductase electron transfer protein

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
METVTPFKEIIDVIKEKGGDSLKYCYQCGLCDSVCPWNRVRQFSMRKVVRQGVFGLTEIEQEEIWRCSTCGTCPSRCPRG
VNQIEAGIALRTMGAEYDVYPGHVSTIRNVVASLTSEGNSIGGERAKRGDWAKELPVKQYEEGMEALYFTGCYLSYDPRM
RKVAQATATILNKAGVKFGILGNKETCCGESIRKTGNEELFKKLAKENIRNFIDNGVKKVIVSSPHCYHTFKNEYPEFMV
NFEVVFISQLIEQLINEGRLTIKGEFAKKVTYHDPCYLGRHNGVYDEPRNVLKKVPGLQFTEMADNRESALCCGGGGGRI
WMETPKEERFADLRLRQAVNAGAEVLATSCPYCITNFTDSSLDLADDEKVEVKDLTEIIAEVI

Sequences:

>Translated_383_residues
METVTPFKEIIDVIKEKGGDSLKYCYQCGLCDSVCPWNRVRQFSMRKVVRQGVFGLTEIEQEEIWRCSTCGTCPSRCPRG
VNQIEAGIALRTMGAEYDVYPGHVSTIRNVVASLTSEGNSIGGERAKRGDWAKELPVKQYEEGMEALYFTGCYLSYDPRM
RKVAQATATILNKAGVKFGILGNKETCCGESIRKTGNEELFKKLAKENIRNFIDNGVKKVIVSSPHCYHTFKNEYPEFMV
NFEVVFISQLIEQLINEGRLTIKGEFAKKVTYHDPCYLGRHNGVYDEPRNVLKKVPGLQFTEMADNRESALCCGGGGGRI
WMETPKEERFADLRLRQAVNAGAEVLATSCPYCITNFTDSSLDLADDEKVEVKDLTEIIAEVI
>Mature_383_residues
METVTPFKEIIDVIKEKGGDSLKYCYQCGLCDSVCPWNRVRQFSMRKVVRQGVFGLTEIEQEEIWRCSTCGTCPSRCPRG
VNQIEAGIALRTMGAEYDVYPGHVSTIRNVVASLTSEGNSIGGERAKRGDWAKELPVKQYEEGMEALYFTGCYLSYDPRM
RKVAQATATILNKAGVKFGILGNKETCCGESIRKTGNEELFKKLAKENIRNFIDNGVKKVIVSSPHCYHTFKNEYPEFMV
NFEVVFISQLIEQLINEGRLTIKGEFAKKVTYHDPCYLGRHNGVYDEPRNVLKKVPGLQFTEMADNRESALCCGGGGGRI
WMETPKEERFADLRLRQAVNAGAEVLATSCPYCITNFTDSSLDLADDEKVEVKDLTEIIAEVI

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=388, Percent_Identity=21.9072164948454, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 42996; Mature: 42996

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVTPFKEIIDVIKEKGGDSLKYCYQCGLCDSVCPWNRVRQFSMRKVVRQGVFGLTEIE
CCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHC
QEEIWRCSTCGTCPSRCPRGVNQIEAGIALRTMGAEYDVYPGHVSTIRNVVASLTSEGNS
HHHHHCCCCCCCCHHHCCCCHHHHHHCHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC
IGGERAKRGDWAKELPVKQYEEGMEALYFTGCYLSYDPRMRKVAQATATILNKAGVKFGI
CCCCHHHCCCCHHHCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCCEEEE
LGNKETCCGESIRKTGNEELFKKLAKENIRNFIDNGVKKVIVSSPHCYHTFKNEYPEFMV
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHH
NFEVVFISQLIEQLINEGRLTIKGEFAKKVTYHDPCYLGRHNGVYDEPRNVLKKVPGLQF
HHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCEECCCCCCCCCHHHHHHHCCCCEE
TEMADNRESALCCGGGGGRIWMETPKEERFADLRLRQAVNAGAEVLATSCPYCITNFTDS
HHHCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHCCCCC
SLDLADDEKVEVKDLTEIIAEVI
CCCCCCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure
METVTPFKEIIDVIKEKGGDSLKYCYQCGLCDSVCPWNRVRQFSMRKVVRQGVFGLTEIE
CCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHC
QEEIWRCSTCGTCPSRCPRGVNQIEAGIALRTMGAEYDVYPGHVSTIRNVVASLTSEGNS
HHHHHCCCCCCCCHHHCCCCHHHHHHCHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC
IGGERAKRGDWAKELPVKQYEEGMEALYFTGCYLSYDPRMRKVAQATATILNKAGVKFGI
CCCCHHHCCCCHHHCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCCEEEE
LGNKETCCGESIRKTGNEELFKKLAKENIRNFIDNGVKKVIVSSPHCYHTFKNEYPEFMV
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHH
NFEVVFISQLIEQLINEGRLTIKGEFAKKVTYHDPCYLGRHNGVYDEPRNVLKKVPGLQF
HHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCEECCCCCCCCCHHHHHHHCCCCEE
TEMADNRESALCCGGGGGRIWMETPKEERFADLRLRQAVNAGAEVLATSCPYCITNFTDS
HHHCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHCCCCC
SLDLADDEKVEVKDLTEIIAEVI
CCCCCCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]