| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117796
Identifier: 197117796
GI number: 197117796
Start: 1621797
End: 1622645
Strand: Direct
Name: 197117796
Synonym: Gbem_1408
Alternate gene names: NA
Gene position: 1621797-1622645 (Clockwise)
Preceding gene: 197117795
Following gene: 197117797
Centisome position: 35.14
GC content: 61.72
Gene sequence:
>849_bases ATGAAATTCAACGGAACCGAATCCTACATCGCCACGGACGATTTGAAGCTTGCGGTCAACTCGGCCATGGTGCTGGGGCG CCCGCTGCTGGTGAAGGGGGAGCCGGGTACCGGCAAGACCATGCTGGCGGAGGAGGTGGCGCGGGCTTTAGACAAGCCGC TCTTCCAGTGGCACATCAAGTCGAGCACGAAGGCCCAGCAGGGGCTCTACGAGTACGACGCGGTCTCGCGCCTGCGCGAC TCGCAGCTGGGGGACGCGCGGGTGCACGAGATCGGGAACTACATCGTGAAGGGGAAGCTTTGGGAGGCATTCGAGTCGGA ACGGCAGGCGGTGCTTCTCATCGACGAGGTGGATAAGGCGGATATCGAATTCCCCAACGACCTGTTGCGCGAGCTGGACC GGATGGAGTTCTACGTCTACGAGACCAAGGAGCTGGTGCAGGCGAAGCATCGTCCGGCGATCATCATCACCAGCAACAAC GAGAAGGAACTCCCTGACGCGTTTTTGCGCCGCTGCTTTTTCCATTACATCCGCTTCCCGGACCGGGAGACGCTGGAGAG CATCGTTTCGGTGCATTATCCAGGCCTGAACCGGGCTCTGGTGAAGGAGGCCCTGGAGGTGTTCCTCGGGGTGAGGGAGA TGCCGGGGCTGAAGAAGAAGCCCTCGACCTCGGAGCTCCTCGACTGGCTGAAGATACTGGTCGCGGAAGGTGTTTCGCCG CAGTCGCTGCAGAAAGCGGGAAAGGAAAGGGAGATCCCGCCCTTGCACGGGGCGCTTCTCAAAAACGAGCAGGACCTGCA GCTCTTCCAGGGGCAGCCCCGGCGCTCGGGTCTCGGCTTCAGGACCTGA
Upstream 100 bases:
>100_bases CGGATATCTCCGCCGCGCTCGGCTATTGAAGCGATGCGGGGCTAGGGCGGATAGGGCGGATAGGGCGGATAACGGGAATA AATTACAGGGGATGAGCGAC
Downstream 100 bases:
>100_bases GGCGATGCTGATCGACTTCTTCCTGGGGCTCAAGCGCGCCGGCGTGCCGGTGACGCTGAACGAGTTCCTGACCCTCCTGG AGGCGCTCAAAAAGCGGCTC
Product: ATPase AAA
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; MoxR-Like ATPase; AAA Family ATPase; AAA_5 ATPase; AAA ATPase; ATPase AAA Family Protein; ATPase-Like Protein; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; MoxR Family ATPase; ATPase Aaa Family; Oxidoreductase; AAA ATPase Central RegionATPase; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; ClpA/ClpB Family Protein; AAA ATPase Family Protein; MoxR-Like ATPase CoxD; ATPase Protein
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKFNGTESYIATDDLKLAVNSAMVLGRPLLVKGEPGTGKTMLAEEVARALDKPLFQWHIKSSTKAQQGLYEYDAVSRLRD SQLGDARVHEIGNYIVKGKLWEAFESERQAVLLIDEVDKADIEFPNDLLRELDRMEFYVYETKELVQAKHRPAIIITSNN EKELPDAFLRRCFFHYIRFPDRETLESIVSVHYPGLNRALVKEALEVFLGVREMPGLKKKPSTSELLDWLKILVAEGVSP QSLQKAGKEREIPPLHGALLKNEQDLQLFQGQPRRSGLGFRT
Sequences:
>Translated_282_residues MKFNGTESYIATDDLKLAVNSAMVLGRPLLVKGEPGTGKTMLAEEVARALDKPLFQWHIKSSTKAQQGLYEYDAVSRLRD SQLGDARVHEIGNYIVKGKLWEAFESERQAVLLIDEVDKADIEFPNDLLRELDRMEFYVYETKELVQAKHRPAIIITSNN EKELPDAFLRRCFFHYIRFPDRETLESIVSVHYPGLNRALVKEALEVFLGVREMPGLKKKPSTSELLDWLKILVAEGVSP QSLQKAGKEREIPPLHGALLKNEQDLQLFQGQPRRSGLGFRT >Mature_282_residues MKFNGTESYIATDDLKLAVNSAMVLGRPLLVKGEPGTGKTMLAEEVARALDKPLFQWHIKSSTKAQQGLYEYDAVSRLRD SQLGDARVHEIGNYIVKGKLWEAFESERQAVLLIDEVDKADIEFPNDLLRELDRMEFYVYETKELVQAKHRPAIIITSNN EKELPDAFLRRCFFHYIRFPDRETLESIVSVHYPGLNRALVKEALEVFLGVREMPGLKKKPSTSELLDWLKILVAEGVSP QSLQKAGKEREIPPLHGALLKNEQDLQLFQGQPRRSGLGFRT
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32120; Mature: 32120
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNGTESYIATDDLKLAVNSAMVLGRPLLVKGEPGTGKTMLAEEVARALDKPLFQWHIK CCCCCCCCEEECCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCHHHEECCC SSTKAQQGLYEYDAVSRLRDSQLGDARVHEIGNYIVKGKLWEAFESERQAVLLIDEVDKA CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCC DIEFPNDLLRELDRMEFYVYETKELVQAKHRPAIIITSNNEKELPDAFLRRCFFHYIRFP CCCCCHHHHHHHHHHHEEEEHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC DRETLESIVSVHYPGLNRALVKEALEVFLGVREMPGLKKKPSTSELLDWLKILVAEGVSP CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCH QSLQKAGKEREIPPLHGALLKNEQDLQLFQGQPRRSGLGFRT HHHHHCCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKFNGTESYIATDDLKLAVNSAMVLGRPLLVKGEPGTGKTMLAEEVARALDKPLFQWHIK CCCCCCCCEEECCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCHHHEECCC SSTKAQQGLYEYDAVSRLRDSQLGDARVHEIGNYIVKGKLWEAFESERQAVLLIDEVDKA CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCC DIEFPNDLLRELDRMEFYVYETKELVQAKHRPAIIITSNNEKELPDAFLRRCFFHYIRFP CCCCCHHHHHHHHHHHEEEEHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC DRETLESIVSVHYPGLNRALVKEALEVFLGVREMPGLKKKPSTSELLDWLKILVAEGVSP CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCH QSLQKAGKEREIPPLHGALLKNEQDLQLFQGQPRRSGLGFRT HHHHHCCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA