Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117787

Identifier: 197117787

GI number: 197117787

Start: 1612789

End: 1613886

Strand: Reverse

Name: 197117787

Synonym: Gbem_1399

Alternate gene names: NA

Gene position: 1613886-1612789 (Counterclockwise)

Preceding gene: 197117789

Following gene: 197117778

Centisome position: 34.97

GC content: 53.55

Gene sequence:

>1098_bases
ATGGCATCACTGGATTTTGAGCAGGAAAAAGAACTATTCAGGAAGTACTACGACAGGAACCACAAGCAGTTGACTGCGGC
CAAGGATGCCTACGTCGGCATTGTCAGGACATTGATCAGGCAAAGCGATGTAGGTGAGGCCACCAAAATAGAAGGGCGCG
TCAAGGACAAAGATGAGTGCATCAAGAAGTTCCAGCGTAAGTACCAGGGCAAGTTGGAGGCCGACGAACAACCCTACAGC
ATCAGTGACTTCATATCCGACTTGATAGGCGTCAGGATCGTCTGTCTCTACGAGGATGAAGTTCCCGTGGTGTCGGAATT
GCTGCAGCGGCACTTCAAGATACTGAACGTTACCGATAAAACCTCTGCAGTGGAAAGCACGGAAGATTCCTTCGGCTACA
AAGGTCTGCACATGGACCTGACCCTGAATCCCGATGCCGCTTACCCCTGCAAACACCTCCCGGCGGCGGAGATGTGCTTC
GAGGTTCAGATCAGGTCCCTGATCCAGGACGCCTGGAGCATGCTGGACCACAAGATCAAGTACAAGAGATCGATCCCCGT
AGATCTGAAGCGCAGGATCAATGTCCTCGCCGCCCTTTTCGAACTGGCGGACCGCGAATTCAAGGAGATCAGGAACGCCA
CTTCGGACCTGATGCAGCAGGCGACGGTCACTCAGATCGAGCCCGCCGACGGCATAGTGGAAGCGTCAGGGCAGGCGGCA
GCTGCCGCCACAAAAACGGTGAACGTCTTCAACTTCCTCCCCATAGCAGGGCATTTCTTCAGGGATTTCCCTTTCGATGA
CCAAAAGGTGGACGATTTTGTCCAGGACATACTGGAGCGGGACGGCACTTTGCAGAAGGCCGATCTGCACCGGTGCCTGA
ACGAGAATCTGAAGGTGGTCAGGGAGTACAGCGAGCATGTGATCGCAGAAAACCCCAACCGTACCTTCACTGCCTACACC
TCGATCAGGCATTGTCTTTATCTCTATAACCAGGAGAAATTCGAGCGGATCTTGTCGAGAAGAAACAGGGAGCGCTTCGC
GGCATGGCTGAAGGTAAACCCGACAACGCAGCAGCTTGTTAATCCGGCTTCAGTTTAA

Upstream 100 bases:

>100_bases
CTAAGCGAGTCATTATCACTCGCAATTGGCTTGATAACAGGGTAGAGTGATGCGGCCTTTGGCGTGGAAAGCGCAGGCTT
GACGGATGAGGAACTGAAAC

Downstream 100 bases:

>100_bases
TCGCGGGTCGCCTCCCGGCCCTTAGCGCGCGGCAAAGACCGAGGTCGCGCGCAGCTTTAAAACCGGACGCGCGCTGAGCG
CAGCGGCTACCACACTGACG

Product: RelA/SpoT domain-containing protein

Products: NA

Alternate protein names: RelA/SpoT Domain Protein; GTP Pyrophosphokinase; Region Found In RelA / SpoT Proteins; RelA/SpoT; Rela/Spot Domain Protein

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MASLDFEQEKELFRKYYDRNHKQLTAAKDAYVGIVRTLIRQSDVGEATKIEGRVKDKDECIKKFQRKYQGKLEADEQPYS
ISDFISDLIGVRIVCLYEDEVPVVSELLQRHFKILNVTDKTSAVESTEDSFGYKGLHMDLTLNPDAAYPCKHLPAAEMCF
EVQIRSLIQDAWSMLDHKIKYKRSIPVDLKRRINVLAALFELADREFKEIRNATSDLMQQATVTQIEPADGIVEASGQAA
AAATKTVNVFNFLPIAGHFFRDFPFDDQKVDDFVQDILERDGTLQKADLHRCLNENLKVVREYSEHVIAENPNRTFTAYT
SIRHCLYLYNQEKFERILSRRNRERFAAWLKVNPTTQQLVNPASV

Sequences:

>Translated_365_residues
MASLDFEQEKELFRKYYDRNHKQLTAAKDAYVGIVRTLIRQSDVGEATKIEGRVKDKDECIKKFQRKYQGKLEADEQPYS
ISDFISDLIGVRIVCLYEDEVPVVSELLQRHFKILNVTDKTSAVESTEDSFGYKGLHMDLTLNPDAAYPCKHLPAAEMCF
EVQIRSLIQDAWSMLDHKIKYKRSIPVDLKRRINVLAALFELADREFKEIRNATSDLMQQATVTQIEPADGIVEASGQAA
AAATKTVNVFNFLPIAGHFFRDFPFDDQKVDDFVQDILERDGTLQKADLHRCLNENLKVVREYSEHVIAENPNRTFTAYT
SIRHCLYLYNQEKFERILSRRNRERFAAWLKVNPTTQQLVNPASV
>Mature_364_residues
ASLDFEQEKELFRKYYDRNHKQLTAAKDAYVGIVRTLIRQSDVGEATKIEGRVKDKDECIKKFQRKYQGKLEADEQPYSI
SDFISDLIGVRIVCLYEDEVPVVSELLQRHFKILNVTDKTSAVESTEDSFGYKGLHMDLTLNPDAAYPCKHLPAAEMCFE
VQIRSLIQDAWSMLDHKIKYKRSIPVDLKRRINVLAALFELADREFKEIRNATSDLMQQATVTQIEPADGIVEASGQAAA
AATKTVNVFNFLPIAGHFFRDFPFDDQKVDDFVQDILERDGTLQKADLHRCLNENLKVVREYSEHVIAENPNRTFTAYTS
IRHCLYLYNQEKFERILSRRNRERFAAWLKVNPTTQQLVNPASV

Specific function: Unknown

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42110; Mature: 41979

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLDFEQEKELFRKYYDRNHKQLTAAKDAYVGIVRTLIRQSDVGEATKIEGRVKDKDEC
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHH
IKKFQRKYQGKLEADEQPYSISDFISDLIGVRIVCLYEDEVPVVSELLQRHFKILNVTDK
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCH
TSAVESTEDSFGYKGLHMDLTLNPDAAYPCKHLPAAEMCFEVQIRSLIQDAWSMLDHKIK
HHHHHCCHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YKRSIPVDLKRRINVLAALFELADREFKEIRNATSDLMQQATVTQIEPADGIVEASGQAA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHH
AAATKTVNVFNFLPIAGHFFRDFPFDDQKVDDFVQDILERDGTLQKADLHRCLNENLKVV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
REYSEHVIAENPNRTFTAYTSIRHCLYLYNQEKFERILSRRNRERFAAWLKVNPTTQQLV
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHEEECCCHHHHC
NPASV
CCCCC
>Mature Secondary Structure 
ASLDFEQEKELFRKYYDRNHKQLTAAKDAYVGIVRTLIRQSDVGEATKIEGRVKDKDEC
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHH
IKKFQRKYQGKLEADEQPYSISDFISDLIGVRIVCLYEDEVPVVSELLQRHFKILNVTDK
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCH
TSAVESTEDSFGYKGLHMDLTLNPDAAYPCKHLPAAEMCFEVQIRSLIQDAWSMLDHKIK
HHHHHCCHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YKRSIPVDLKRRINVLAALFELADREFKEIRNATSDLMQQATVTQIEPADGIVEASGQAA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHH
AAATKTVNVFNFLPIAGHFFRDFPFDDQKVDDFVQDILERDGTLQKADLHRCLNENLKVV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
REYSEHVIAENPNRTFTAYTSIRHCLYLYNQEKFERILSRRNRERFAAWLKVNPTTQQLV
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHEEECCCHHHHC
NPASV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA