| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117772
Identifier: 197117772
GI number: 197117772
Start: 1601883
End: 1602329
Strand: Direct
Name: 197117772
Synonym: Gbem_1384
Alternate gene names: NA
Gene position: 1601883-1602329 (Clockwise)
Preceding gene: 197117768
Following gene: 308535235
Centisome position: 34.71
GC content: 55.93
Gene sequence:
>447_bases ATGCCAGAAAAGGGTGAGAAATCGATAGGCGAACTGGTTTCTGAGTTGACGCAGGAAGTGCGCATGCTGTTCAGGCAGGA GATGGAGCTTTTCAGCGTCGAGATGAAAGGGAAAGCACTCCATGCTGCAAAAGACGCAGCCGCAATAGGCGTAGGCGGTG TTTTACTGTACTCGGGGTTGCTGGTGTTGCTGGCGGCGATCGTGCTGGGGCTGGCGACGGTAATGCCCGCCTGGGGCGCG GCGCTGCTGGTCGCTTTTGTCTGCATCGGGGCGGGGATAGCGCTGGTGCTCAAGGGGCAAAAGGATCTGGCGCACATGAA GGTGAAACCTGAACAGACGGCGGAAAGCGTGAAGGAGACGGCACAATGGGCGAAAACATTAAAATTAACGAGCAGTCATC GGCGGACAAGCTTCGGGAGCAGATCAGACATACGGAAAGCGATATAA
Upstream 100 bases:
>100_bases ACAAGCCTTGCAATGCCCGGTGAAAACTTCTAACATTAAACTGTGCACAGAAATAACGCGGCTGTTGCTGGCCTGCTCTA GGTGACAAAAGGAGGCAGCC
Downstream 100 bases:
>100_bases CCGAAACGGTGCAAACCATAGAGCAGAGGCTCTCGCCAAATCACCTGCGCCGGGAGGGGGTACGCAAGGCGAAAGGGCTC GCCTGGAGGGGCGTGGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MPEKGEKSIGELVSELTQEVRMLFRQEMELFSVEMKGKALHAAKDAAAIGVGGVLLYSGLLVLLAAIVLGLATVMPAWGA ALLVAFVCIGAGIALVLKGQKDLAHMKVKPEQTAESVKETAQWAKTLKLTSSHRRTSFGSRSDIRKAI
Sequences:
>Translated_148_residues MPEKGEKSIGELVSELTQEVRMLFRQEMELFSVEMKGKALHAAKDAAAIGVGGVLLYSGLLVLLAAIVLGLATVMPAWGA ALLVAFVCIGAGIALVLKGQKDLAHMKVKPEQTAESVKETAQWAKTLKLTSSHRRTSFGSRSDIRKAI >Mature_147_residues PEKGEKSIGELVSELTQEVRMLFRQEMELFSVEMKGKALHAAKDAAAIGVGGVLLYSGLLVLLAAIVLGLATVMPAWGAA LLVAFVCIGAGIALVLKGQKDLAHMKVKPEQTAESVKETAQWAKTLKLTSSHRRTSFGSRSDIRKAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15831; Mature: 15700
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEKGEKSIGELVSELTQEVRMLFRQEMELFSVEMKGKALHAAKDAAAIGVGGVLLYSGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LVLLAAIVLGLATVMPAWGAALLVAFVCIGAGIALVLKGQKDLAHMKVKPEQTAESVKET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCHHHHHHHHHHH AQWAKTLKLTSSHRRTSFGSRSDIRKAI HHHHHHHHHHHHHHHCCCCCHHHHHHCC >Mature Secondary Structure PEKGEKSIGELVSELTQEVRMLFRQEMELFSVEMKGKALHAAKDAAAIGVGGVLLYSGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LVLLAAIVLGLATVMPAWGAALLVAFVCIGAGIALVLKGQKDLAHMKVKPEQTAESVKET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCHHHHHHHHHHH AQWAKTLKLTSSHRRTSFGSRSDIRKAI HHHHHHHHHHHHHHHCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA