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The map label for this gene is zntR [H]

Identifier: 197117717

GI number: 197117717

Start: 1533066

End: 1533494

Strand: Reverse

Name: zntR [H]

Synonym: Gbem_1329

Alternate gene names: 197117717

Gene position: 1533494-1533066 (Counterclockwise)

Preceding gene: 197117724

Following gene: 197117716

Centisome position: 33.23

GC content: 55.71

Gene sequence:

>429_bases
ATGGACGACATCAAGGATGGCGAAGAAATAACCCCGATCGGGGATCTCGCCATAGCACTCGGACTTACCACCAGGACCAT
CCGTTACTGGGAGGAAGTCGGCATCATCGAAAGCGTGCAGAGAAACGACGGCGCGACGCGCGGCTTCACCCCGTACTACG
TGCGCCGCATCAAGTTCATCATCAAGCTAAAGGAGCTCGGCCTCACCATCAAGGAGATGCAGGACCTATACGTAGCTTAC
GGTGAAGCGAAGCAGACCGAGCGCATGGTTCCCCGGCTGGTGGAGATACTGGACGAGCACATCGAGAAGATAGACGAAAA
GATGGCGAAGCTGGCGTCACTTAGAAAAGACATCGTCTCTTACCGCCAGAAGATTTCCACCAAGTTCGGCGCCGGCCGTG
ACGGCGACGGCAACAAAAGTGACTCGTAA

Upstream 100 bases:

>100_bases
CGACAAGCGCCGCTTAGCTTCCCGCAGCAGGGCAAAAGAAATTGACAGCCGGAGCGCCATGCACTAGATTATCTTTAATT
TTTTGCCCACGAGGACTCAA

Downstream 100 bases:

>100_bases
TCACCGCTTTCCTTACGGGGCATCGTCCAGCGGCGACGCCCCTTTTCCTTCTTATCTACCCGACTCCCCCCTCACCCCAG
TTGTCATCCAAGCCGCCTCA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDDIKDGEEITPIGDLAIALGLTTRTIRYWEEVGIIESVQRNDGATRGFTPYYVRRIKFIIKLKELGLTIKEMQDLYVAY
GEAKQTERMVPRLVEILDEHIEKIDEKMAKLASLRKDIVSYRQKISTKFGAGRDGDGNKSDS

Sequences:

>Translated_142_residues
MDDIKDGEEITPIGDLAIALGLTTRTIRYWEEVGIIESVQRNDGATRGFTPYYVRRIKFIIKLKELGLTIKEMQDLYVAY
GEAKQTERMVPRLVEILDEHIEKIDEKMAKLASLRKDIVSYRQKISTKFGAGRDGDGNKSDS
>Mature_142_residues
MDDIKDGEEITPIGDLAIALGLTTRTIRYWEEVGIIESVQRNDGATRGFTPYYVRRIKFIIKLKELGLTIKEMQDLYVAY
GEAKQTERMVPRLVEILDEHIEKIDEKMAKLASLRKDIVSYRQKISTKFGAGRDGDGNKSDS

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16198; Mature: 16198

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDIKDGEEITPIGDLAIALGLTTRTIRYWEEVGIIESVQRNDGATRGFTPYYVRRIKFI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
IKLKELGLTIKEMQDLYVAYGEAKQTERMVPRLVEILDEHIEKIDEKMAKLASLRKDIVS
HHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQKISTKFGAGRDGDGNKSDS
HHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDDIKDGEEITPIGDLAIALGLTTRTIRYWEEVGIIESVQRNDGATRGFTPYYVRRIKFI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
IKLKELGLTIKEMQDLYVAYGEAKQTERMVPRLVEILDEHIEKIDEKMAKLASLRKDIVS
HHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQKISTKFGAGRDGDGNKSDS
HHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]