| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is queE [C]
Identifier: 197117706
GI number: 197117706
Start: 1519486
End: 1520241
Strand: Direct
Name: queE [C]
Synonym: Gbem_1318
Alternate gene names: 197117706
Gene position: 1519486-1520241 (Clockwise)
Preceding gene: 197117705
Following gene: 308535228
Centisome position: 32.92
GC content: 62.3
Gene sequence:
>756_bases ATGAGTAACGGTCTTCGCGCCCCTCTGGTCGAGTGCTTTTCCTCGATCCAGGGCGAGGGAGTCCTGGTCGGCCTGCGCCA GGTGTTCCTGAGGCTTGCCGGCTGCAACCTGAACTGCTCCTTTTGCGATACTCCCGGCATGAGCGAGACGCCCAAGGAGT GCCTGCTGGAACTTACCCCTGGGCGGCGGGACTTCTTCAAGGTGCCGAACCCGGTCGGACTGGAGCGGGTCGCCACGCTT TTGGAGAGCTGGACCGAGGGGTGGCCCGGCATCCACCACTCCATCAGCGTTACCGGAGGAGAGCCGCTACTGTACGCGAA AGAGCTGAAGGAGTGGCTTCCTGTGTTGAGAACGCTGCTTCCGGTCTACCTGGAGACCAACGGGACCCTCGCCCATCAGC TGGCACCGCTCATGCCGCACCTGGATTACATCGGCATGGATTTCAAGCTCCCCTCCACCTCAGGCTGCGTGAATCTTTGG GATGCGCACCGCGCCTTCCTGGAAACGGCTTCGAAGACTAGCGTCTTCGTGAAGATCGTCATCGACCAGAGCACCGAGGA TTGGGAGATCGAACGCTCCTGCCAGATGATCATGGCCGTGAACCCCGGCATCCCCCTCATCCTGCAGCCGATGACACTCG GAAGCGGCGCCGTCGCGCTCCCCGCGCTGAGGATGCTGGAACTCCAGGAACTCTGCTCGGGCCTGAACGAGGTCCGGGTC ATCCCCCAGACGCACAAGTTCATGGGGCAGCTCTAG
Upstream 100 bases:
>100_bases CGCTACCTTTATCATGAGCTGACCAAGATCCTTGGCAGCGACAAGGTGAAGGTGGAGATGGTCACCGTGTGGGAGTCGGA TTTCGCCGCCGCGAGCTACT
Downstream 100 bases:
>100_bases CCGGAGATCTAGTCGGACGAAAGAACAGGGTAAGGTCAAGGGGGCGTCGTCGGGCGCCCCTGTTTATTTTCCGGGGCTGT CGGTATAATGAGGGCTGGCA
Product: 7-carboxy-7-deazaguanine synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSNGLRAPLVECFSSIQGEGVLVGLRQVFLRLAGCNLNCSFCDTPGMSETPKECLLELTPGRRDFFKVPNPVGLERVATL LESWTEGWPGIHHSISVTGGEPLLYAKELKEWLPVLRTLLPVYLETNGTLAHQLAPLMPHLDYIGMDFKLPSTSGCVNLW DAHRAFLETASKTSVFVKIVIDQSTEDWEIERSCQMIMAVNPGIPLILQPMTLGSGAVALPALRMLELQELCSGLNEVRV IPQTHKFMGQL
Sequences:
>Translated_251_residues MSNGLRAPLVECFSSIQGEGVLVGLRQVFLRLAGCNLNCSFCDTPGMSETPKECLLELTPGRRDFFKVPNPVGLERVATL LESWTEGWPGIHHSISVTGGEPLLYAKELKEWLPVLRTLLPVYLETNGTLAHQLAPLMPHLDYIGMDFKLPSTSGCVNLW DAHRAFLETASKTSVFVKIVIDQSTEDWEIERSCQMIMAVNPGIPLILQPMTLGSGAVALPALRMLELQELCSGLNEVRV IPQTHKFMGQL >Mature_250_residues SNGLRAPLVECFSSIQGEGVLVGLRQVFLRLAGCNLNCSFCDTPGMSETPKECLLELTPGRRDFFKVPNPVGLERVATLL ESWTEGWPGIHHSISVTGGEPLLYAKELKEWLPVLRTLLPVYLETNGTLAHQLAPLMPHLDYIGMDFKLPSTSGCVNLWD AHRAFLETASKTSVFVKIVIDQSTEDWEIERSCQMIMAVNPGIPLILQPMTLGSGAVALPALRMLELQELCSGLNEVRVI PQTHKFMGQL
Specific function: Unknown
COG id: COG0602
COG function: function code O; Organic radical activating enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 27713; Mature: 27582
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNGLRAPLVECFSSIQGEGVLVGLRQVFLRLAGCNLNCSFCDTPGMSETPKECLLELTP CCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHEECCC GRRDFFKVPNPVGLERVATLLESWTEGWPGIHHSISVTGGEPLLYAKELKEWLPVLRTLL CCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH PVYLETNGTLAHQLAPLMPHLDYIGMDFKLPSTSGCVNLWDAHRAFLETASKTSVFVKIV HHHHCCCCCHHHHHHHHHCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE IDQSTEDWEIERSCQMIMAVNPGIPLILQPMTLGSGAVALPALRMLELQELCSGLNEVRV EECCCCCCHHHHHCEEEEEECCCCCEEEECEECCCCCHHHHHHHHHHHHHHHCCHHHEEE IPQTHKFMGQL CCCHHHHHCCC >Mature Secondary Structure SNGLRAPLVECFSSIQGEGVLVGLRQVFLRLAGCNLNCSFCDTPGMSETPKECLLELTP CCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHEECCC GRRDFFKVPNPVGLERVATLLESWTEGWPGIHHSISVTGGEPLLYAKELKEWLPVLRTLL CCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH PVYLETNGTLAHQLAPLMPHLDYIGMDFKLPSTSGCVNLWDAHRAFLETASKTSVFVKIV HHHHCCCCCHHHHHHHHHCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE IDQSTEDWEIERSCQMIMAVNPGIPLILQPMTLGSGAVALPALRMLELQELCSGLNEVRV EECCCCCCHHHHHCEEEEEECCCCCEEEECEECCCCCHHHHHHHHHHHHHHHCCHHHEEE IPQTHKFMGQL CCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]