Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117704

Identifier: 197117704

GI number: 197117704

Start: 1518623

End: 1518976

Strand: Direct

Name: 197117704

Synonym: Gbem_1316

Alternate gene names: NA

Gene position: 1518623-1518976 (Clockwise)

Preceding gene: 197117703

Following gene: 197117705

Centisome position: 32.91

GC content: 62.99

Gene sequence:

>354_bases
ATGCGTAAAAAAACCGTCCGCAGCGGGATCAGGGCCATCTGCGCCAGCATCATCTCCCTCATGGTCGCCACCTTCTTCCA
CGACAGCCTGGGCCGGTTCTTCCTGCTCGGGCTGGACGGGGAGGCGCGGCTGGTATTCTTCGGCTTTTTCCTGGCCGGCG
TCCTGGGCGGGTTCGGAGTGCTGGTAGCCGCTATCGGTCTCTTGCAGAGCGAAGCACCCCACCCGAGGGCGCGCCTGATG
CCGGGCATCCTGCTGCTTTTCTCCCTGGTTTTTCTCTTCTTCGTGCTCGCCTACACGTCGTTCACCACCCCCGCGTCTCC
GAGGCTTGCCCCGGGCGAGAGCATAAACATCTGA

Upstream 100 bases:

>100_bases
GGTAAGCCTCATCGGCGACTCTCCCGAACTCCTCAGGAAAGGGGTAGGGGACGTGAGCTGGTGCGAATGATGCGCCCATC
GGAACCGAGGTCAGCACTCC

Downstream 100 bases:

>100_bases
AACCGGTCAGGCAGCGGCTCCGCGTTGATCTCTCCCGAGCCCCGCATGTCCAATTAAATCCGCTACACCTCAACCTTAAC
CTTAACCTTAGCCTGTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MRKKTVRSGIRAICASIISLMVATFFHDSLGRFFLLGLDGEARLVFFGFFLAGVLGGFGVLVAAIGLLQSEAPHPRARLM
PGILLLFSLVFLFFVLAYTSFTTPASPRLAPGESINI

Sequences:

>Translated_117_residues
MRKKTVRSGIRAICASIISLMVATFFHDSLGRFFLLGLDGEARLVFFGFFLAGVLGGFGVLVAAIGLLQSEAPHPRARLM
PGILLLFSLVFLFFVLAYTSFTTPASPRLAPGESINI
>Mature_117_residues
MRKKTVRSGIRAICASIISLMVATFFHDSLGRFFLLGLDGEARLVFFGFFLAGVLGGFGVLVAAIGLLQSEAPHPRARLM
PGILLLFSLVFLFFVLAYTSFTTPASPRLAPGESINI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12636; Mature: 12636

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKTVRSGIRAICASIISLMVATFFHDSLGRFFLLGLDGEARLVFFGFFLAGVLGGFGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
LVAAIGLLQSEAPHPRARLMPGILLLFSLVFLFFVLAYTSFTTPASPRLAPGESINI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKKTVRSGIRAICASIISLMVATFFHDSLGRFFLLGLDGEARLVFFGFFLAGVLGGFGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
LVAAIGLLQSEAPHPRARLMPGILLLFSLVFLFFVLAYTSFTTPASPRLAPGESINI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA