Click here to switch to the map view.

The map label for this gene is 197117654

Identifier: 197117654

GI number: 197117654

Start: 1463723

End: 1464277

Strand: Direct

Name: 197117654

Synonym: Gbem_1266

Alternate gene names: NA

Gene position: 1463723-1464277 (Clockwise)

Preceding gene: 197117653

Following gene: 197117655

Centisome position: 31.72

GC content: 60.72

Gene sequence:

>555_bases
ATGCCGACGAGCAGCCGACTCGCCATCTGGTGTCTCGCCCTGCTCCTCTCCATAACGCTCTATGTAAAAGGCCGCTTTCC
TGCCCCGAGGGGTGAGGAAGCGGCCTTTTTGTGTGCGCGGGGCGAAAGTGTCACGGTGCGACTGGCGGGAGGATTTCCCC
GCGCCGGCGTGTATCGGTTTCCCGACGGTACCTCGGTGCGTAGCGCCATAAAAATGACGGTTACCGATACGGAGCCTCTG
GGAGCGCTCCCGGCAGGGGGCGCGGCGCTGCTGCAAAACGGGGACGTCCTCAACCTTAGCATTCCCGACGGAAAAAACGC
CGTGATTTCAATCACAAAAATGGGAGCTCAGGAAAGGATGCTGCTGCAGGTGCCGCTGGACCCGGACCGGATGTCGGCGA
AGGAATGGGCGCTGTTGCCGGGGATAGGACCTGTGCTTTCGGAACGGATCGTGGCGGAGCGTCACGAAAATGGCGCTTTT
GGCTCCCTGGAGGGGGTGTTACGGGTGCCGGGGATCGGGCCGGCAAAACTGGAGGCGATTAAAAGATATTTCTAA

Upstream 100 bases:

>100_bases
GCGTTTCCTCCAACGTCATCGAGGCCTCCTACCAGGCCCTGATCGATGCCATTGAATTCAAGCTCCACAAGGATGAGGAG
GCGGCAGCGCCGAGGCAGTG

Downstream 100 bases:

>100_bases
TGGTTCGTAAATCCCTTTTTTTTCGTAGGTTACGCTTTGGCAAAGCTTTCATTAGATTACAATCAATTCATAATCTTTAT
CTTGGCATGCAAGGTGAAAT

Product: ComEA-like DNA-binding/uptake protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MPTSSRLAIWCLALLLSITLYVKGRFPAPRGEEAAFLCARGESVTVRLAGGFPRAGVYRFPDGTSVRSAIKMTVTDTEPL
GALPAGGAALLQNGDVLNLSIPDGKNAVISITKMGAQERMLLQVPLDPDRMSAKEWALLPGIGPVLSERIVAERHENGAF
GSLEGVLRVPGIGPAKLEAIKRYF

Sequences:

>Translated_184_residues
MPTSSRLAIWCLALLLSITLYVKGRFPAPRGEEAAFLCARGESVTVRLAGGFPRAGVYRFPDGTSVRSAIKMTVTDTEPL
GALPAGGAALLQNGDVLNLSIPDGKNAVISITKMGAQERMLLQVPLDPDRMSAKEWALLPGIGPVLSERIVAERHENGAF
GSLEGVLRVPGIGPAKLEAIKRYF
>Mature_183_residues
PTSSRLAIWCLALLLSITLYVKGRFPAPRGEEAAFLCARGESVTVRLAGGFPRAGVYRFPDGTSVRSAIKMTVTDTEPLG
ALPAGGAALLQNGDVLNLSIPDGKNAVISITKMGAQERMLLQVPLDPDRMSAKEWALLPGIGPVLSERIVAERHENGAFG
SLEGVLRVPGIGPAKLEAIKRYF

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19581; Mature: 19450

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSSRLAIWCLALLLSITLYVKGRFPAPRGEEAAFLCARGESVTVRLAGGFPRAGVYRF
CCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEC
PDGTSVRSAIKMTVTDTEPLGALPAGGAALLQNGDVLNLSIPDGKNAVISITKMGAQERM
CCCCCCCCEEEEEEECCCCCCCCCCCCHHEECCCCEEEEECCCCCCEEEEEEECCCCCEE
LLQVPLDPDRMSAKEWALLPGIGPVLSERIVAERHENGAFGSLEGVLRVPGIGPAKLEAI
EEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHH
KRYF
HHCC
>Mature Secondary Structure 
PTSSRLAIWCLALLLSITLYVKGRFPAPRGEEAAFLCARGESVTVRLAGGFPRAGVYRF
CCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEC
PDGTSVRSAIKMTVTDTEPLGALPAGGAALLQNGDVLNLSIPDGKNAVISITKMGAQERM
CCCCCCCCEEEEEEECCCCCCCCCCCCHHEECCCCEEEEECCCCCCEEEEEEECCCCCEE
LLQVPLDPDRMSAKEWALLPGIGPVLSERIVAERHENGAFGSLEGVLRVPGIGPAKLEAI
EEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHH
KRYF
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA