| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yahN [C]
Identifier: 197117613
GI number: 197117613
Start: 1419049
End: 1419666
Strand: Direct
Name: yahN [C]
Synonym: Gbem_1225
Alternate gene names: 197117613
Gene position: 1419049-1419666 (Clockwise)
Preceding gene: 197117612
Following gene: 197117615
Centisome position: 30.75
GC content: 62.14
Gene sequence:
>618_bases ATGCTGGATTTTCTCACCGCGGGGCTCGTGCTAGGTCTTTCCGCCGGGTTCTCCCCCGGGCCGCTGCTCATGCTGGTCAT CTCCGAAACGCTGCACCACGGGACCAGGTCCGGGGTGCGGGTCGCCCTGTCGCCCGTCGTCACCGACCTTCCCATCGTCC TCGCCACGCTGCTCCTTTTGGTCAAGGTCTCCGGCTACCACGGCGTACTCGGGGGCGTATCCCTGGCGGGAGGGCTCTTC GTCCTAGCCACCGGATGGGATTCCATCCGTACCCGCCCCGTGCAGCTGGATCTCCCCAAAGAACAGCCCAAGTCGCTAAG AAAAGGGGTGCTGACCAATTTCCTCAGTCCGCACCCCTATCTGTTCTGGATCACCGTCGGCGCGCCGCTTCTGACCAAAT CGCTCAACGTCGGCTGGACCGCGTTTTTCGCCTTCGTGCTGAGCTTCTACCTGTCGCTTATCGGGGCCAAGATCATCCTC GCCGTGGCGGTGGGAAGGTCGAAGGCATTTCTATCCGGCAGGCTCTACCTTTACACCATGCGTTTTCTCGGGGGGCTCCT CGTCCTCTTCGCGCTGCTCCTTTTCAAGGAGGGGCTGGTGCTTCTAGGGCTCATCTAG
Upstream 100 bases:
>100_bases GGATCATCAAGGAAGTTGCCGAAGGAATGGAAACCGCAGCGGAACAGCCGCCCATGCCGAATAAGGAGCGCTGAGCTGCG GGGAAAGGTGCCGTCTCAAC
Downstream 100 bases:
>100_bases GGTGGGCTGAAGGGGGACATGAAAGGGGGACAGGCACCTGGCGGAGCCAGTCCCCATCTTCACTCGAACCTGTAAAACCT GGTGACCTCGACGTCCGCCA
Product: membrane protein
Products: NA
Alternate protein names: LysE Type Translocator; Amino Acid Transporter LysE; Lysine Exporter LysE/YggA; Lysine Exporter Protein LysE/YggA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MLDFLTAGLVLGLSAGFSPGPLLMLVISETLHHGTRSGVRVALSPVVTDLPIVLATLLLLVKVSGYHGVLGGVSLAGGLF VLATGWDSIRTRPVQLDLPKEQPKSLRKGVLTNFLSPHPYLFWITVGAPLLTKSLNVGWTAFFAFVLSFYLSLIGAKIIL AVAVGRSKAFLSGRLYLYTMRFLGGLLVLFALLLFKEGLVLLGLI
Sequences:
>Translated_205_residues MLDFLTAGLVLGLSAGFSPGPLLMLVISETLHHGTRSGVRVALSPVVTDLPIVLATLLLLVKVSGYHGVLGGVSLAGGLF VLATGWDSIRTRPVQLDLPKEQPKSLRKGVLTNFLSPHPYLFWITVGAPLLTKSLNVGWTAFFAFVLSFYLSLIGAKIIL AVAVGRSKAFLSGRLYLYTMRFLGGLLVLFALLLFKEGLVLLGLI >Mature_205_residues MLDFLTAGLVLGLSAGFSPGPLLMLVISETLHHGTRSGVRVALSPVVTDLPIVLATLLLLVKVSGYHGVLGGVSLAGGLF VLATGWDSIRTRPVQLDLPKEQPKSLRKGVLTNFLSPHPYLFWITVGAPLLTKSLNVGWTAFFAFVLSFYLSLIGAKIIL AVAVGRSKAFLSGRLYLYTMRFLGGLLVLFALLLFKEGLVLLGLI
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21959; Mature: 21959
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDFLTAGLVLGLSAGFSPGPLLMLVISETLHHGTRSGVRVALSPVVTDLPIVLATLLLL CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHH VKVSGYHGVLGGVSLAGGLFVLATGWDSIRTRPVQLDLPKEQPKSLRKGVLTNFLSPHPY HHCCCCCCHHHHHHHHCCEEEEEECCHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCE LFWITVGAPLLTKSLNVGWTAFFAFVLSFYLSLIGAKIILAVAVGRSKAFLSGRLYLYTM EEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RFLGGLLVLFALLLFKEGLVLLGLI HHHHHHHHHHHHHHHHCCHHEEECC >Mature Secondary Structure MLDFLTAGLVLGLSAGFSPGPLLMLVISETLHHGTRSGVRVALSPVVTDLPIVLATLLLL CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHH VKVSGYHGVLGGVSLAGGLFVLATGWDSIRTRPVQLDLPKEQPKSLRKGVLTNFLSPHPY HHCCCCCCHHHHHHHHCCEEEEEECCHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCE LFWITVGAPLLTKSLNVGWTAFFAFVLSFYLSLIGAKIILAVAVGRSKAFLSGRLYLYTM EEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RFLGGLLVLFALLLFKEGLVLLGLI HHHHHHHHHHHHHHHHCCHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA