Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117602

Identifier: 197117602

GI number: 197117602

Start: 1407298

End: 1407792

Strand: Reverse

Name: 197117602

Synonym: Gbem_1214

Alternate gene names: NA

Gene position: 1407792-1407298 (Counterclockwise)

Preceding gene: 197117614

Following gene: 197117597

Centisome position: 30.5

GC content: 56.77

Gene sequence:

>495_bases
ATGCGCCTTTCACTTTATTTAGAACACGGTGAGCAGTTTTCACGGGCAGCCCTGAAACTGCCGGTTCGCACTCCCATAGA
CATAGAGTCGAGCCTTCTCAATTGCTTCCTCGAGGTGCTGCCGGTAGCTTCGTCGCACTACGTGGGGCCGGACCACCTTC
CAGGGATCGAGTTTCCTCATCCAGAAATACGGGTGGTCTTTCAGCTGAAAGAGCATCCGCAGGTTGCAGCGATCTATTCC
ATCGATGTCTTTGTCACCGATGCGACGCTGAGTCTGGTGAGCCATGCCCAAGGTCACACCCACGTCGATATCAACCGCAG
GTCCGCGCACATCGAGCGGCTGATCTCGAATAAACAAAACGGGCTATTGGAGTTGATCGGCTGCAGTCACACCCTGCTGA
TCGACAGGCTGTCCCAGGCCTTCCTGGATCTGCGCGGCGCGTACCTCAACGCGCTCAACGAAGAGGGGTGCCTCCCGGTC
CCGCACCACCATTAA

Upstream 100 bases:

>100_bases
AGAGATGAGCGAAAGATAATTAAGGGAGCAGACTTGCTTTTTCACGCAGGTCGGCTTTATTTTTATCATGTCAATCCACC
AACAACTTATAGGTGAGCAT

Downstream 100 bases:

>100_bases
AAAGAAGGCCCCGGGGACGACTTTAAGCCCTCCGGGGCCAGTCTCGGCTTTAGTTTCGGTTTTACACAAAGTCTGTTTTT
CTCCGATTTTCTCCGTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRLSLYLEHGEQFSRAALKLPVRTPIDIESSLLNCFLEVLPVASSHYVGPDHLPGIEFPHPEIRVVFQLKEHPQVAAIYS
IDVFVTDATLSLVSHAQGHTHVDINRRSAHIERLISNKQNGLLELIGCSHTLLIDRLSQAFLDLRGAYLNALNEEGCLPV
PHHH

Sequences:

>Translated_164_residues
MRLSLYLEHGEQFSRAALKLPVRTPIDIESSLLNCFLEVLPVASSHYVGPDHLPGIEFPHPEIRVVFQLKEHPQVAAIYS
IDVFVTDATLSLVSHAQGHTHVDINRRSAHIERLISNKQNGLLELIGCSHTLLIDRLSQAFLDLRGAYLNALNEEGCLPV
PHHH
>Mature_164_residues
MRLSLYLEHGEQFSRAALKLPVRTPIDIESSLLNCFLEVLPVASSHYVGPDHLPGIEFPHPEIRVVFQLKEHPQVAAIYS
IDVFVTDATLSLVSHAQGHTHVDINRRSAHIERLISNKQNGLLELIGCSHTLLIDRLSQAFLDLRGAYLNALNEEGCLPV
PHHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18357; Mature: 18357

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSLYLEHGEQFSRAALKLPVRTPIDIESSLLNCFLEVLPVASSHYVGPDHLPGIEFPH
CEEEEEECCCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PEIRVVFQLKEHPQVAAIYSIDVFVTDATLSLVSHAQGHTHVDINRRSAHIERLISNKQN
CCEEEEEEECCCCCEEEEEEEEEEEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCC
GLLELIGCSHTLLIDRLSQAFLDLRGAYLNALNEEGCLPVPHHH
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRLSLYLEHGEQFSRAALKLPVRTPIDIESSLLNCFLEVLPVASSHYVGPDHLPGIEFPH
CEEEEEECCCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PEIRVVFQLKEHPQVAAIYSIDVFVTDATLSLVSHAQGHTHVDINRRSAHIERLISNKQN
CCEEEEEEECCCCCEEEEEEEEEEEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCC
GLLELIGCSHTLLIDRLSQAFLDLRGAYLNALNEEGCLPVPHHH
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA