| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117594
Identifier: 197117594
GI number: 197117594
Start: 1400689
End: 1401051
Strand: Direct
Name: 197117594
Synonym: Gbem_1206
Alternate gene names: NA
Gene position: 1400689-1401051 (Clockwise)
Preceding gene: 197117593
Following gene: 197117598
Centisome position: 30.35
GC content: 58.4
Gene sequence:
>363_bases ATGAGAACGGTATTCTTGCTCATGCTTATACTTGTTGCCAAGCCTTCCTTGGCAATTGAGCCCGACAAGGTATCGCATTT CGCTGGGAGTTCTGCCTTGGGCCTTGTTGCCGACAGCGTCGCCTATCACACCGCGACACAAATGGGGCCGGGCGAGAGAA TGGCGGTGTCCTCGGGCGTTGCTCTGGTGCCGGGTTTCATCATCGAGTGCGTGGACGAGTTTTCAGGCTACCACTTCAGC TGGGCCGATCTTTTGGCCGATGCTCTCGGGGCCGGTACCGGTTCCGTTGCCGGTGAGCTTCTGAACGGTCAATTCTGGAT TTCCGCTTCGGGCCGCCAGGTGCGCTTGATCGGCCACTGGTGA
Upstream 100 bases:
>100_bases ACGGAGCGATAGGGAACGGCTGCTCGCCCCCGTGTCATTCATGAAAATTCCGGTATCATTAACGTTGTGCGGTGAGTCAC AACTATTCAGGGAGGTCACG
Downstream 100 bases:
>100_bases AAAGCTCCCTGCGCACCCTCGGGAGGAGCATGCATGTTTTGTCATGAAGGTGGCGAGGCTCCAGAAAAGCTTCCAGGACG GCGACAGCGAACACAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MRTVFLLMLILVAKPSLAIEPDKVSHFAGSSALGLVADSVAYHTATQMGPGERMAVSSGVALVPGFIIECVDEFSGYHFS WADLLADALGAGTGSVAGELLNGQFWISASGRQVRLIGHW
Sequences:
>Translated_120_residues MRTVFLLMLILVAKPSLAIEPDKVSHFAGSSALGLVADSVAYHTATQMGPGERMAVSSGVALVPGFIIECVDEFSGYHFS WADLLADALGAGTGSVAGELLNGQFWISASGRQVRLIGHW >Mature_120_residues MRTVFLLMLILVAKPSLAIEPDKVSHFAGSSALGLVADSVAYHTATQMGPGERMAVSSGVALVPGFIIECVDEFSGYHFS WADLLADALGAGTGSVAGELLNGQFWISASGRQVRLIGHW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12620; Mature: 12620
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVFLLMLILVAKPSLAIEPDKVSHFAGSSALGLVADSVAYHTATQMGPGERMAVSSGV CHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCC ALVPGFIIECVDEFSGYHFSWADLLADALGAGTGSVAGELLNGQFWISASGRQVRLIGHW HHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCEEEEEECC >Mature Secondary Structure MRTVFLLMLILVAKPSLAIEPDKVSHFAGSSALGLVADSVAYHTATQMGPGERMAVSSGV CHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCC ALVPGFIIECVDEFSGYHFSWADLLADALGAGTGSVAGELLNGQFWISASGRQVRLIGHW HHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA