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The map label for this gene is cdhE [H]

Identifier: 197117571

GI number: 197117571

Start: 1378981

End: 1380003

Strand: Direct

Name: cdhE [H]

Synonym: Gbem_1183

Alternate gene names: 197117571

Gene position: 1378981-1380003 (Clockwise)

Preceding gene: 197117570

Following gene: 197117572

Centisome position: 29.88

GC content: 66.86

Gene sequence:

>1023_bases
GTGAACGACAAGGTCCCGGGATTTATACGCTGGTACCCGGCGGGCCAAGGCCAGGTGCCGCAGCTTTCCACCAGTCTAAC
CGCAGCCGATCGCCTCGGGGCTTGCAAGGCGCGCTGGGGGATCAACCGGATGCATTACCTGGTCCCCGCCGGGCTTTATG
CCATCGGGGCGCCGGACGCCGAAGCGCCGGTCGTCGTCACGGCCAACTACAAGATGAGTTTCGACCTGGTGCGCAAGGCG
CTGGCCGGGCGCAACGTCTGGCTCCTCGTTCTGGAGACCTTCGGCATCAACGTCTGGTGTGCGGCGGGGAAGGGGACCTT
CGGCACCGACGAGCTGGTACGGCGGGTCGCCGCGACCGCTCTCTCCGGCGTGGTCTCGCACCGCAGGCTCATCCTCCCGA
TACTGGGGGCGCCCGGCGTGTCGGCCCACCAGGTGAAGCGGCGCTCCGGCTTCGACGTCGCCTATGCTGCCATCCGTGCC
GATGACCTTCCGGAGTACCTGGACAACGGCGGCAGGACCACGGCGTCCATGCGCGAGCTCAGCTTCAACTGGTACGAACG
GCTGGTGCTGGTCCCGGTGGAACTGGTTCTGGTGCTGAAACCATCCCTTCCGGTTGCGCTCTTTCTCTACCTTGCCGCCT
GGCTCGCCGCAGGTCCCGGGGCGGCCGCGACCGTCGTCGCCGGATATGCCGGCGCCGTCTTCACCGGGGTCGCCGCGGCG
CCGGTGCTCCTTCCGCTTCTTCCCTCCAGAAGCTTCGCCGTCAAGGGAGGTGCCGCCGGCCTCGTCTACACCCTCCTTTT
CCGTCTGGCGGCAGGAGGCGAGGGCTGGAGCCTGCCGGTTACGCTGGCGGCTTTCCTCGCCTTTCCCGCTGTCACCTCCT
TTTACACCCTCAATTTCACCGGCTGCACCACCTACACCTCGAAATCGGGGGTGAAGAAAGAGATGCGCCTGGGACTGCCG
GTCCTGGGGGGGGCGATTTTGGCCGCGCTGCTCCTCGTGACCGTGGGACGGATGCTCTCATGA

Upstream 100 bases:

>100_bases
GCTGCAGCCAAAGCCTGCGGCGGGATGCGCCCCGGGTGCCTCCCAGGACCCTGACGCTCCCCCCTGTTGAGGGCCGCGTA
CCTCCGCCGGCGGCGGAGAG

Downstream 100 bases:

>100_bases
TGGAGAAAAACGTATGAAGGGATTCAGGTATCTCGAAGGGGTGGCAACGCTGGAGTTGAACCGGGAGCTTTGCGTCGGGT
GCGGCAGATGCATCGAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: ACDS complex subunit gamma; ACDS complex methyltransferase; Corrinoid/iron-sulfur component large subunit [H]

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNDKVPGFIRWYPAGQGQVPQLSTSLTAADRLGACKARWGINRMHYLVPAGLYAIGAPDAEAPVVVTANYKMSFDLVRKA
LAGRNVWLLVLETFGINVWCAAGKGTFGTDELVRRVAATALSGVVSHRRLILPILGAPGVSAHQVKRRSGFDVAYAAIRA
DDLPEYLDNGGRTTASMRELSFNWYERLVLVPVELVLVLKPSLPVALFLYLAAWLAAGPGAAATVVAGYAGAVFTGVAAA
PVLLPLLPSRSFAVKGGAAGLVYTLLFRLAAGGEGWSLPVTLAAFLAFPAVTSFYTLNFTGCTTYTSKSGVKKEMRLGLP
VLGGAILAALLLVTVGRMLS

Sequences:

>Translated_340_residues
MNDKVPGFIRWYPAGQGQVPQLSTSLTAADRLGACKARWGINRMHYLVPAGLYAIGAPDAEAPVVVTANYKMSFDLVRKA
LAGRNVWLLVLETFGINVWCAAGKGTFGTDELVRRVAATALSGVVSHRRLILPILGAPGVSAHQVKRRSGFDVAYAAIRA
DDLPEYLDNGGRTTASMRELSFNWYERLVLVPVELVLVLKPSLPVALFLYLAAWLAAGPGAAATVVAGYAGAVFTGVAAA
PVLLPLLPSRSFAVKGGAAGLVYTLLFRLAAGGEGWSLPVTLAAFLAFPAVTSFYTLNFTGCTTYTSKSGVKKEMRLGLP
VLGGAILAALLLVTVGRMLS
>Mature_340_residues
MNDKVPGFIRWYPAGQGQVPQLSTSLTAADRLGACKARWGINRMHYLVPAGLYAIGAPDAEAPVVVTANYKMSFDLVRKA
LAGRNVWLLVLETFGINVWCAAGKGTFGTDELVRRVAATALSGVVSHRRLILPILGAPGVSAHQVKRRSGFDVAYAAIRA
DDLPEYLDNGGRTTASMRELSFNWYERLVLVPVELVLVLKPSLPVALFLYLAAWLAAGPGAAATVVAGYAGAVFTGVAAA
PVLLPLLPSRSFAVKGGAAGLVYTLLFRLAAGGEGWSLPVTLAAFLAFPAVTSFYTLNFTGCTTYTSKSGVKKEMRLGLP
VLGGAILAALLLVTVGRMLS

Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2) [H]

COG id: COG1456

COG function: function code C; CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016041
- InterPro:   IPR016218
- InterPro:   IPR011005
- InterPro:   IPR007202 [H]

Pfam domain/function: PF03599 CdhD; PF04060 FeS [H]

EC number: NA

Molecular weight: Translated: 35880; Mature: 35880

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKVPGFIRWYPAGQGQVPQLSTSLTAADRLGACKARWGINRMHYLVPAGLYAIGAPDA
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHCCCEEEECCCCC
EAPVVVTANYKMSFDLVRKALAGRNVWLLVLETFGINVWCAAGKGTFGTDELVRRVAATA
CCCEEEEECCEECHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHH
LSGVVSHRRLILPILGAPGVSAHQVKRRSGFDVAYAAIRADDLPEYLDNGGRTTASMREL
HHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCCCHHHHHHH
SFNWYERLVLVPVELVLVLKPSLPVALFLYLAAWLAAGPGAAATVVAGYAGAVFTGVAAA
HHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
PVLLPLLPSRSFAVKGGAAGLVYTLLFRLAAGGEGWSLPVTLAAFLAFPAVTSFYTLNFT
HHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEEEE
GCTTYTSKSGVKKEMRLGLPVLGGAILAALLLVTVGRMLS
CCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDKVPGFIRWYPAGQGQVPQLSTSLTAADRLGACKARWGINRMHYLVPAGLYAIGAPDA
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHCCCEEEECCCCC
EAPVVVTANYKMSFDLVRKALAGRNVWLLVLETFGINVWCAAGKGTFGTDELVRRVAATA
CCCEEEEECCEECHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHH
LSGVVSHRRLILPILGAPGVSAHQVKRRSGFDVAYAAIRADDLPEYLDNGGRTTASMREL
HHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCCCHHHHHHH
SFNWYERLVLVPVELVLVLKPSLPVALFLYLAAWLAAGPGAAATVVAGYAGAVFTGVAAA
HHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
PVLLPLLPSRSFAVKGGAAGLVYTLLFRLAAGGEGWSLPVTLAAFLAFPAVTSFYTLNFT
HHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEEEE
GCTTYTSKSGVKKEMRLGLPVLGGAILAALLLVTVGRMLS
CCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]