| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is tag [H]
Identifier: 197117569
GI number: 197117569
Start: 1376497
End: 1377093
Strand: Direct
Name: tag [H]
Synonym: Gbem_1181
Alternate gene names: 197117569
Gene position: 1376497-1377093 (Clockwise)
Preceding gene: 197117568
Following gene: 197117570
Centisome position: 29.83
GC content: 63.48
Gene sequence:
>597_bases ATGCAAACAACCTCCATCAACCGCTGCGCCTGGGCCGGGAGCGATCCGCTTTACTGCGCCTATCACGACCAGGAATGGGG AGTGCCGGTGCACGACGACCGTCTCCTCTTCGAGTTCCTCACCCTGGAGGGGGCACAGGCAGGGCTGTCCTGGATCACCA TCCTGCGCAAGCGGGAGGGATACCGCCGCGCCTTCGCAGCTTTCGACCCCGAGGCTGTGGCGCGCTTCACCGACGCCGAG CTCATCTGTCTTGCCAGCGAGGAGTCCATCGTGCGAAACCGCCTGAAAATTGCCTCGACCCGCGACAATGCCCGTGCCTT TTTGTCTGTGCGCGAGGAGTTCGGCTCCTTCGACGCCTACCTCTGGCGCTTCGTCGACGGCCTTCCTTTGCAACACGCCC GGCGCTCCCTGTCCGAGGTCCCCGCCTCGACCGCCGTTTCCGATCTGCTGAGCCGCGACCTCAAAAAGCGCGGCTTTCGC TTTGTGGGGAGCACCATCTGTTACGCCTTCATGCAGGCGGTGGGGATGGTGAACGACCACACGGTGGAGTGCTTCCGCTG GGCGGAGCTCGGCGGGAACATTGGAGAAAACCTGTAA
Upstream 100 bases:
>100_bases AAACTGCTACGACGGGTGGCATTGTCAATTGAAGACTTCGCTTGCGCTTTTCATCGTCAATTGTCAATTATCAATTGTCA ATTGACCTTCCGGGAGATCC
Downstream 100 bases:
>100_bases CAGCAATTGCGCGGCGCGCGGATTTCGGGTAATTTGTACAGGCGCCGGCGCGCGCAGGGGCTTCAAGCCCGGGTGCCGTT GCCGGCCGCTCATTCCCGCC
Product: 3-methyladenine DNA glycosylase I
Products: NA
Alternate protein names: GMP synthetase; Glutamine amidotransferase [H]
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MQTTSINRCAWAGSDPLYCAYHDQEWGVPVHDDRLLFEFLTLEGAQAGLSWITILRKREGYRRAFAAFDPEAVARFTDAE LICLASEESIVRNRLKIASTRDNARAFLSVREEFGSFDAYLWRFVDGLPLQHARRSLSEVPASTAVSDLLSRDLKKRGFR FVGSTICYAFMQAVGMVNDHTVECFRWAELGGNIGENL
Sequences:
>Translated_198_residues MQTTSINRCAWAGSDPLYCAYHDQEWGVPVHDDRLLFEFLTLEGAQAGLSWITILRKREGYRRAFAAFDPEAVARFTDAE LICLASEESIVRNRLKIASTRDNARAFLSVREEFGSFDAYLWRFVDGLPLQHARRSLSEVPASTAVSDLLSRDLKKRGFR FVGSTICYAFMQAVGMVNDHTVECFRWAELGGNIGENL >Mature_198_residues MQTTSINRCAWAGSDPLYCAYHDQEWGVPVHDDRLLFEFLTLEGAQAGLSWITILRKREGYRRAFAAFDPEAVARFTDAE LICLASEESIVRNRLKIASTRDNARAFLSVREEFGSFDAYLWRFVDGLPLQHARRSLSEVPASTAVSDLLSRDLKKRGFR FVGSTICYAFMQAVGMVNDHTVECFRWAELGGNIGENL
Specific function: Catalyzes the synthesis of GMP from XMP [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 N-acetyltransferase domains [H]
Homologues:
Organism=Escherichia coli, GI1789971, Length=179, Percent_Identity=51.9553072625698, Blast_Score=201, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR005019 - InterPro: IPR001962 - InterPro: IPR001317 - InterPro: IPR011257 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR001674 - InterPro: IPR014729 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF03352 Adenine_glyco; PF00733 Asn_synthase; PF00117 GATase; PF00958 GMP_synt_C [H]
EC number: =6.3.5.2 [H]
Molecular weight: Translated: 22409; Mature: 22409
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTTSINRCAWAGSDPLYCAYHDQEWGVPVHDDRLLFEFLTLEGAQAGLSWITILRKREG CCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH YRRAFAAFDPEAVARFTDAELICLASEESIVRNRLKIASTRDNARAFLSVREEFGSFDAY HHHHHHHCCHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHH LWRFVDGLPLQHARRSLSEVPASTAVSDLLSRDLKKRGFRFVGSTICYAFMQAVGMVNDH HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TVECFRWAELGGNIGENL HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQTTSINRCAWAGSDPLYCAYHDQEWGVPVHDDRLLFEFLTLEGAQAGLSWITILRKREG CCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH YRRAFAAFDPEAVARFTDAELICLASEESIVRNRLKIASTRDNARAFLSVREEFGSFDAY HHHHHHHCCHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHH LWRFVDGLPLQHARRSLSEVPASTAVSDLLSRDLKKRGFRFVGSTICYAFMQAVGMVNDH HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TVECFRWAELGGNIGENL HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954 [H]