| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117538
Identifier: 197117538
GI number: 197117538
Start: 1327058
End: 1327816
Strand: Direct
Name: 197117538
Synonym: Gbem_1150
Alternate gene names: NA
Gene position: 1327058-1327816 (Clockwise)
Preceding gene: 308535219
Following gene: 308535220
Centisome position: 28.75
GC content: 60.21
Gene sequence:
>759_bases ATGAAAAAAACCATGAAGACCCTTATTATGGCAACGGCGCTGACCATGGCAACCACCGGAATCGCAATGGCGACCCCTTC CACCCAGATCTGGATCCCGTCGACGGACGTCCAGGGGTACAAGAGCCTGCACCTTGGCATCGACAACTACACCCGCACCT CCAACAACTCCGCCGTGAGCCACGTCTACGACCTTGGCCTCACCGCTGGCGTTCTCCCCTTCGAGAAGCTGCAGGGCGAG GTCGGTATCGACTACATCACCAACGGCAACAACGGTTACGACAGCCAGCCGCTCTACTTCAACGCCAAGCTCGGCACCCC CGAGGGCTCCCTCTTCGAAGGCTCGCCTGCGCTCGCCCTCGGCGGTTACGGCTTCGGCACCAACCGGGACAAGGGGAGCG CCTTCCGTACCGATCAGGACGTGATTTACGGCCTGGCAGCGAAGACCTTGCCCGTTGTCGGGCGCCTTTCCGCCGGCTAC TACGTCGGCAACGATAAACTGCTGCTCGACGTCAACGGCAACAAAGAAAACGACGGCGTGCTCCTCTCCTGGGACCGCAC CATGAGCGAGATCTCCGACAAGCTATGGGTTGCAGTCGACTACCAGGGTGGCAAGAACGCCCTCGGCGCACTGAGCTTCG GCGCTTCCTGGGCCTTCGCGAAAAACGTTTCCGTCATCTTCGGCTACGACATCTACAACGAGAAGAAGCTGGCAGGCGAG AACACCTTCACCACCCAGCTCGACATCAACTTCCCGTAG
Upstream 100 bases:
>100_bases CCTTTTTTTATTCATCGAAAGGGGGAGGATCAGCCGCGGCGGCTGACAGGCTCATACGGTTAAGGTAGTACCAAATCCAA AATTACAAAGGAGTAAGTAG
Downstream 100 bases:
>100_bases CACTGTCAGCTCTCGGACGATTCAAAGCATGAAGCAAAGAGGAGAGGGGAGACGGTACTGTCTCAGGGAAAGAAGGATTC AGTCTCTAAACTTTTTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKKTMKTLIMATALTMATTGIAMATPSTQIWIPSTDVQGYKSLHLGIDNYTRTSNNSAVSHVYDLGLTAGVLPFEKLQGE VGIDYITNGNNGYDSQPLYFNAKLGTPEGSLFEGSPALALGGYGFGTNRDKGSAFRTDQDVIYGLAAKTLPVVGRLSAGY YVGNDKLLLDVNGNKENDGVLLSWDRTMSEISDKLWVAVDYQGGKNALGALSFGASWAFAKNVSVIFGYDIYNEKKLAGE NTFTTQLDINFP
Sequences:
>Translated_252_residues MKKTMKTLIMATALTMATTGIAMATPSTQIWIPSTDVQGYKSLHLGIDNYTRTSNNSAVSHVYDLGLTAGVLPFEKLQGE VGIDYITNGNNGYDSQPLYFNAKLGTPEGSLFEGSPALALGGYGFGTNRDKGSAFRTDQDVIYGLAAKTLPVVGRLSAGY YVGNDKLLLDVNGNKENDGVLLSWDRTMSEISDKLWVAVDYQGGKNALGALSFGASWAFAKNVSVIFGYDIYNEKKLAGE NTFTTQLDINFP >Mature_252_residues MKKTMKTLIMATALTMATTGIAMATPSTQIWIPSTDVQGYKSLHLGIDNYTRTSNNSAVSHVYDLGLTAGVLPFEKLQGE VGIDYITNGNNGYDSQPLYFNAKLGTPEGSLFEGSPALALGGYGFGTNRDKGSAFRTDQDVIYGLAAKTLPVVGRLSAGY YVGNDKLLLDVNGNKENDGVLLSWDRTMSEISDKLWVAVDYQGGKNALGALSFGASWAFAKNVSVIFGYDIYNEKKLAGE NTFTTQLDINFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27147; Mature: 27147
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTMKTLIMATALTMATTGIAMATPSTQIWIPSTDVQGYKSLHLGIDNYTRTSNNSAVS CCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCEEEEECCCCCEECCCCCHHH HVYDLGLTAGVLPFEKLQGEVGIDYITNGNNGYDSQPLYFNAKLGTPEGSLFEGSPALAL HHHHCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEECCCCCEEE GGYGFGTNRDKGSAFRTDQDVIYGLAAKTLPVVGRLSAGYYVGNDKLLLDVNGNKENDGV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCEEECCCEEEEEECCCCCCCCE LLSWDRTMSEISDKLWVAVDYQGGKNALGALSFGASWAFAKNVSVIFGYDIYNEKKLAGE EEEECHHHHHCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCEEEEEEEECCCCCCCCC NTFTTQLDINFP CEEEEEEEEECC >Mature Secondary Structure MKKTMKTLIMATALTMATTGIAMATPSTQIWIPSTDVQGYKSLHLGIDNYTRTSNNSAVS CCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCEEEEECCCCCEECCCCCHHH HVYDLGLTAGVLPFEKLQGEVGIDYITNGNNGYDSQPLYFNAKLGTPEGSLFEGSPALAL HHHHCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEECCCCCEEE GGYGFGTNRDKGSAFRTDQDVIYGLAAKTLPVVGRLSAGYYVGNDKLLLDVNGNKENDGV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCEEECCCEEEEEECCCCCCCCE LLSWDRTMSEISDKLWVAVDYQGGKNALGALSFGASWAFAKNVSVIFGYDIYNEKKLAGE EEEECHHHHHCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCEEEEEEEECCCCCCCCC NTFTTQLDINFP CEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA