| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117532
Identifier: 197117532
GI number: 197117532
Start: 1320926
End: 1321462
Strand: Reverse
Name: 197117532
Synonym: Gbem_1143
Alternate gene names: NA
Gene position: 1321462-1320926 (Counterclockwise)
Preceding gene: 197117536
Following gene: 197117531
Centisome position: 28.63
GC content: 64.25
Gene sequence:
>537_bases ATGAAAAGAGATCTGAGAAAATTGGCCCTACTTGCCTGCATCACCGCAGCCGCCACCTTTGGCGGCCAGACCGCGTTCGC AGAGTACACCGGGGCGGACCCGTCCCCCGGAGCCGGCCAGCATCAAAAGCACAGAAAGGGGCACCGGGGCGGCGACTTTT TCAAGAAGATGGCGCGTGAGCTGAAACTGACCGACCAGCAGCAGGCCCAGGCGAAATCGCTGTTCGAGAGCAACCCCGCC GAGCATAAGCCGCTGATGGAGAGCCTTAGGGCGGAGCGGAGCCGGATGCAGGACCTGGTACGTTCGGGAAGCGCCGAAGA AGCGGCCATCAGGGAGCAGGCGGCAAAGGTGGCGGCATTGCAGGCGGACCTGGCGGTGAGCAGGGCGCGGGCGGCGAAGC AGTTCCTGGCGCTGCTCACCCCGGCGCAGGCCGCCGAACTGAAAGCGCTCCAGGAAAAGCGCAGAGAGCGAAGGGGACTG GCTCCGAAGGGACCTGTCTCCCTGGAGAACGGCGGTATGGAAGGAGAGGGTTTTTAG
Upstream 100 bases:
>100_bases CATTTCCACACTTCTTCCACTTTGCCTCCACAATTGCCGGCTACCTTTCATACCATATCGTGCCTAGCGCACCGAAGAAC ACATCCAAAGGAGCCTCATC
Downstream 100 bases:
>100_bases CAATCGGTTCCCTCACCTGTCCCCTCCCCTGGCCTTGGCCGGGGGAGCTTTTTTTTTGTCAATTCCTGCTCCTCGCGTAC AATTAGATTCGCCAAAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKRDLRKLALLACITAAATFGGQTAFAEYTGADPSPGAGQHQKHRKGHRGGDFFKKMARELKLTDQQQAQAKSLFESNPA EHKPLMESLRAERSRMQDLVRSGSAEEAAIREQAAKVAALQADLAVSRARAAKQFLALLTPAQAAELKALQEKRRERRGL APKGPVSLENGGMEGEGF
Sequences:
>Translated_178_residues MKRDLRKLALLACITAAATFGGQTAFAEYTGADPSPGAGQHQKHRKGHRGGDFFKKMARELKLTDQQQAQAKSLFESNPA EHKPLMESLRAERSRMQDLVRSGSAEEAAIREQAAKVAALQADLAVSRARAAKQFLALLTPAQAAELKALQEKRRERRGL APKGPVSLENGGMEGEGF >Mature_178_residues MKRDLRKLALLACITAAATFGGQTAFAEYTGADPSPGAGQHQKHRKGHRGGDFFKKMARELKLTDQQQAQAKSLFESNPA EHKPLMESLRAERSRMQDLVRSGSAEEAAIREQAAKVAALQADLAVSRARAAKQFLALLTPAQAAELKALQEKRRERRGL APKGPVSLENGGMEGEGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19307; Mature: 19307
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDLRKLALLACITAAATFGGQTAFAEYTGADPSPGAGQHQKHRKGHRGGDFFKKMARE CCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH LKLTDQQQAQAKSLFESNPAEHKPLMESLRAERSRMQDLVRSGSAEEAAIREQAAKVAAL HCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QADLAVSRARAAKQFLALLTPAQAAELKALQEKRRERRGLAPKGPVSLENGGMEGEGF HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRDLRKLALLACITAAATFGGQTAFAEYTGADPSPGAGQHQKHRKGHRGGDFFKKMARE CCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH LKLTDQQQAQAKSLFESNPAEHKPLMESLRAERSRMQDLVRSGSAEEAAIREQAAKVAAL HCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QADLAVSRARAAKQFLALLTPAQAAELKALQEKRRERRGLAPKGPVSLENGGMEGEGF HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA