Click here to switch to the map view.

The map label for this gene is 197117520

Identifier: 197117520

GI number: 197117520

Start: 1307240

End: 1308550

Strand: Reverse

Name: 197117520

Synonym: Gbem_1131

Alternate gene names: NA

Gene position: 1308550-1307240 (Counterclockwise)

Preceding gene: 197117521

Following gene: 197117519

Centisome position: 28.35

GC content: 57.44

Gene sequence:

>1311_bases
ATGCTCACGACCTGCCTTACGCACAAGTCAGCCAAAATGTTTGCAATCCATCTAGTGATGACCGCAAGCATCTTTCTCTG
GGTCAACAATTCCCATGCAGCATATTTGAGCGGCAACACCAAGCCATTTCATAACGGCGGCACCGGAGAGTGCAATGAGT
GCCATTCAACTGGCGCCGTCGAGAGCGGAGTACCCCGACGCGGTAACCTGTTAGGCAGCGACTCAAGTTCTACGTGCCTC
CGGTGCCACCAGTCCCCCGAAGGGGTTCAACACGAACCCTATCAAGTCGCTACTAGCGGTATCGAGTTAGTCGAAGGGGT
CGCTCCAAGAGAACTCACCCCCGGCGGTGACTTCGGCTGGTTGAAAAAAAACTATCGATGGTCCGGTGAAGGCCGGGATA
AAGAAGCCAGCCAGGGAGAGCGCCACGGTCACAACATAGTAGCTGCAGATTACGGTTATTCGGCGGACACCAAACTTTCG
ACAGCGCCGGGGGGTAACTTCCCTGCCAACTCGTTATCCTGTATCAGCTGCCACGACCCGCACGGCAACTACCGCAGGTC
CGTAGACGGAACGATCAGCAATGCCGGCAAGCCCATCATCGCTTCAGGCTCCTACAACAACAGCCCGGAGCCAGACGCAT
TCAGCGCCGTCAGCGTCTACAGGATGCTGGCAGGCAAGGGGTATAGAGCCACGCCCGGCGTCGAGTTCACCGCCGACCCG
CCGACTGCGGTGGCGCCATCGGCCTATAACAGGGAGGAATCCTCGACGGACACACGGGTCGCCTATGGAAGCGGGGTATC
CGAATGGTGCAGCAACTGCCATGGCTCGATCCACGATGCCGGCAGCGGCAGAGCCACCCAGCATCCCTCAGGGAAACAGG
GCAAACTGAGCGCAGAGATCACCTACAACTACAATGCCTATCTCTCCTCAGGCAACCTGAATGGCTCCGCCGGGACCGCC
TACAGCTCTCTGGTGCCTTTTGAAATGGGAACAGACGACTACGCTGTGCTCAAGGCGACGGCCAACAGCAACGGCTCCAA
CAGAAGCGGTGCTACGATGGACGCCAACGTCATGTGCCTCTCCTGCCACCGTGCCCATGCCGCCGGTTGGGACAGCAGCA
TGAGGTGGAACCCCAATACGACCTTTATCGTATACGATGGAAAGTATCCAGGCACGGATAACGGTGCCCCTGCAGCCATA
GCGCAGGGACGTACCTCTGCCGAAGTGAAGATGGCGATGTATGGCAGAAGAGCATCTGATTTCGCCGTTTATCAAAGAAG
TCTTTGCAATAAGTGCCACGCCAAAGACTGA

Upstream 100 bases:

>100_bases
TAGAATTCAATTAGATACAGGTTTCCCCCTATTAAGAACGATCTGGCGTACAATTTGTACAGGTAGCCAGTGAAAGCCAA
AATGAGGGAGGAAAACCATC

Downstream 100 bases:

>100_bases
TGACCAGCGGGGGGCAAGGCTGTTTAAGGCGTCTGTGGTAGTAAAAGCTGTTAAAATCTGATCGAGAGTGTTATAAATAG
CCGGGGTTATGCCTATTCCA

Product: cytochrome c

Products: NA

Alternate protein names: Cytochrome C

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MLTTCLTHKSAKMFAIHLVMTASIFLWVNNSHAAYLSGNTKPFHNGGTGECNECHSTGAVESGVPRRGNLLGSDSSSTCL
RCHQSPEGVQHEPYQVATSGIELVEGVAPRELTPGGDFGWLKKNYRWSGEGRDKEASQGERHGHNIVAADYGYSADTKLS
TAPGGNFPANSLSCISCHDPHGNYRRSVDGTISNAGKPIIASGSYNNSPEPDAFSAVSVYRMLAGKGYRATPGVEFTADP
PTAVAPSAYNREESSTDTRVAYGSGVSEWCSNCHGSIHDAGSGRATQHPSGKQGKLSAEITYNYNAYLSSGNLNGSAGTA
YSSLVPFEMGTDDYAVLKATANSNGSNRSGATMDANVMCLSCHRAHAAGWDSSMRWNPNTTFIVYDGKYPGTDNGAPAAI
AQGRTSAEVKMAMYGRRASDFAVYQRSLCNKCHAKD

Sequences:

>Translated_436_residues
MLTTCLTHKSAKMFAIHLVMTASIFLWVNNSHAAYLSGNTKPFHNGGTGECNECHSTGAVESGVPRRGNLLGSDSSSTCL
RCHQSPEGVQHEPYQVATSGIELVEGVAPRELTPGGDFGWLKKNYRWSGEGRDKEASQGERHGHNIVAADYGYSADTKLS
TAPGGNFPANSLSCISCHDPHGNYRRSVDGTISNAGKPIIASGSYNNSPEPDAFSAVSVYRMLAGKGYRATPGVEFTADP
PTAVAPSAYNREESSTDTRVAYGSGVSEWCSNCHGSIHDAGSGRATQHPSGKQGKLSAEITYNYNAYLSSGNLNGSAGTA
YSSLVPFEMGTDDYAVLKATANSNGSNRSGATMDANVMCLSCHRAHAAGWDSSMRWNPNTTFIVYDGKYPGTDNGAPAAI
AQGRTSAEVKMAMYGRRASDFAVYQRSLCNKCHAKD
>Mature_436_residues
MLTTCLTHKSAKMFAIHLVMTASIFLWVNNSHAAYLSGNTKPFHNGGTGECNECHSTGAVESGVPRRGNLLGSDSSSTCL
RCHQSPEGVQHEPYQVATSGIELVEGVAPRELTPGGDFGWLKKNYRWSGEGRDKEASQGERHGHNIVAADYGYSADTKLS
TAPGGNFPANSLSCISCHDPHGNYRRSVDGTISNAGKPIIASGSYNNSPEPDAFSAVSVYRMLAGKGYRATPGVEFTADP
PTAVAPSAYNREESSTDTRVAYGSGVSEWCSNCHGSIHDAGSGRATQHPSGKQGKLSAEITYNYNAYLSSGNLNGSAGTA
YSSLVPFEMGTDDYAVLKATANSNGSNRSGATMDANVMCLSCHRAHAAGWDSSMRWNPNTTFIVYDGKYPGTDNGAPAAI
AQGRTSAEVKMAMYGRRASDFAVYQRSLCNKCHAKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46278; Mature: 46278

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTCLTHKSAKMFAIHLVMTASIFLWVNNSHAAYLSGNTKPFHNGGTGECNECHSTGAV
CCEEEEECCCCCEEEHHEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHCCCCH
ESGVPRRGNLLGSDSSSTCLRCHQSPEGVQHEPYQVATSGIELVEGVAPRELTPGGDFGW
HCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
LKKNYRWSGEGRDKEASQGERHGHNIVAADYGYSADTKLSTAPGGNFPANSLSCISCHDP
CCCCEEECCCCCCCCHHCCHHCCCEEEEECCCCCCCCEEECCCCCCCCCCCEEEEEEECC
HGNYRRSVDGTISNAGKPIIASGSYNNSPEPDAFSAVSVYRMLAGKGYRATPGVEFTADP
CCCCEECCCCCHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCC
PTAVAPSAYNREESSTDTRVAYGSGVSEWCSNCHGSIHDAGSGRATQHPSGKQGKLSAEI
CCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE
TYNYNAYLSSGNLNGSAGTAYSSLVPFEMGTDDYAVLKATANSNGSNRSGATMDANVMCL
EEEEEEEEECCCCCCCCCCHHHHCCCEECCCCCEEEEEEECCCCCCCCCCCEECCCEEEE
SCHRAHAAGWDSSMRWNPNTTFIVYDGKYPGTDNGAPAAIAQGRTSAEVKMAMYGRRASD
EECCHHHCCCCCCCEECCCEEEEEECCCCCCCCCCCCCHHHCCCCCCEEEEEHHCCCCHH
FAVYQRSLCNKCHAKD
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTTCLTHKSAKMFAIHLVMTASIFLWVNNSHAAYLSGNTKPFHNGGTGECNECHSTGAV
CCEEEEECCCCCEEEHHEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHCCCCH
ESGVPRRGNLLGSDSSSTCLRCHQSPEGVQHEPYQVATSGIELVEGVAPRELTPGGDFGW
HCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
LKKNYRWSGEGRDKEASQGERHGHNIVAADYGYSADTKLSTAPGGNFPANSLSCISCHDP
CCCCEEECCCCCCCCHHCCHHCCCEEEEECCCCCCCCEEECCCCCCCCCCCEEEEEEECC
HGNYRRSVDGTISNAGKPIIASGSYNNSPEPDAFSAVSVYRMLAGKGYRATPGVEFTADP
CCCCEECCCCCHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCC
PTAVAPSAYNREESSTDTRVAYGSGVSEWCSNCHGSIHDAGSGRATQHPSGKQGKLSAEI
CCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE
TYNYNAYLSSGNLNGSAGTAYSSLVPFEMGTDDYAVLKATANSNGSNRSGATMDANVMCL
EEEEEEEEECCCCCCCCCCHHHHCCCEECCCCCEEEEEEECCCCCCCCCCCEECCCEEEE
SCHRAHAAGWDSSMRWNPNTTFIVYDGKYPGTDNGAPAAIAQGRTSAEVKMAMYGRRASD
EECCHHHCCCCCCCEECCCEEEEEECCCCCCCCCCCCCHHHCCCCCCEEEEEHHCCCCHH
FAVYQRSLCNKCHAKD
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA