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The map label for this gene is 197117501

Identifier: 197117501

GI number: 197117501

Start: 1284178

End: 1285788

Strand: Direct

Name: 197117501

Synonym: Gbem_1112

Alternate gene names: NA

Gene position: 1284178-1285788 (Clockwise)

Preceding gene: 197117500

Following gene: 197117502

Centisome position: 27.83

GC content: 61.82

Gene sequence:

>1611_bases
ATGACCGAGGCAACTGTCGGCACCCGCCGTCCAAGCAGGCGGTTTTGGCTCCCTATCCTGATCTTGGCGGCGGCGACGCT
GCTGGTCTACTCAGTCAGCTTCTTCAACGGTTTCGTTCTCGACGACGAGATGATCATCGTGAACAACCCGCAGACGCTCA
GCCTGAGCAATGTACCCGACGTGCTGTTCGCGCCCGACCTGATCAAGCCCTACTATCGTCCGCTGAACCGGGCCACCTAC
CTGTTCGACTACCAGGTCGCCGGTATGAACCCCGCCTGGTATCACGGCGTGAACATCGTCATACACCTCGGCAACGCGCT
GCTTCTTTATCTGATCTGCCGACGCCTTTTGTCGGACCGCTGGGCAGCCCTGGCTGTGGGGCTGCTCTTCGCGGTGCACC
CCGCCAACAGCGAGGCGGTGAACTGGGTCTCCGCACGCAACACCCTCATGGCGCTCTTCTTCAGCCTCGCTTCCCTCTTG
GCCTACCTGGAGGGGAGGATGAAGGGGAAGACGCTGCTGGTCGTCTCCCCTTTGCTTTACTTCTGCGGTCTGCTCAGCAA
GGAGACGGGGCTCATGATGTCCGCCGTGTTCTTCGTGCTCACCTTTTTCCCCATGCAGGAGGGGGAGGCGCGACTTTCCT
GGAAGGACCGCATCATCCTGCTTTCCCCGTACTTCATCCTCACCTTGGTGTACTTCGGGATGCGCTTTTATTCACTGCAG
GGGGTCGTAGGCACCCCGGTCCCGGCTTCGGGGTTGCTGGAGAGAGTGGCCCAGAATTACCACATCATCCCGCAGTATCT
GGCCCTGCTTCTCTACCCGGCGGATCTCACCCTGTTCCACAAGGTGCCGCAGGGCGGGCTTTTCTCCCCTCCCTGGCACC
TCGCCGCGGTGCTTTTCCTGACCTGGATGGTCTGGCTCGCGCTTAGCAGCCGCAACCGGGTTGCGCTTTTCGGACTTGTC
TGGTTCGTGATCAACTACGCTCCCATCTCCAATATCGTACCCATCCCGAGCGACCAGATCACCGAGCGGTATCTATATAT
GCCCGCCGTCGGGTTTTTCTTCGGTCTCGGCGCCGTGCTCTCCTGGATTTTGGCGCGGACCAATCTGCGCTTTGCCAAGG
CGGCGGTCGTGGTTCTCCTCGTCGCCGCCTCGGCGGTCACCGTGCACCGCAATCTCGACTGGCGCAACGCCCTGTCGCTT
TTCACCAGCGGCGTGCGCAACGATCCCGAGTCCCCGGGCGCCCACTACAACCTTGGGACCGCCTACATGGAGAACGGCGA
CCTGGCCGCCGCCCGGCGCGAATGGGAGCGGACCCTCGCGCTCAACGCCAGGCATGGCGAGGCGATGATGCAGATGGGGA
CGCTGGCTGCCACCGGCGGGGACCTCCGCACCGCCGAGGCCTACTACCGGGCCGCCCTGCAGACGCCTCCAGGCCAGACC
GACCCGAACAAATCCATGGCCCACCTGAATCTGGGCAAAATCTGCGAGAAACGGGGCGACCTGAAGCAGGCGCTGCAGCA
CTACCGACTGTTCATGAAGACAGTTCCCGTTACCTATATGGAGTACAAAGGCGATACCGAACGCAGGATCAAGCTTCTGG
AGCAAAGCTAA

Upstream 100 bases:

>100_bases
TCTTGTCTCTTCCGGCTCTTGCCGTGAGCACAATGCTCGGGCGCGGCGGCACCTTGATCGTAGTAGCCGGCCGGACCCCA
TCACCACAGGAACAAACAAA

Downstream 100 bases:

>100_bases
TCGCGGCGGTCGGCCCCGGCCCTAGACCGCCGGGGTCGGCGGTCGGTCCCGACATCGAATCTCTATAAGCAGCAGGGTGA
AGCACATGAAGCGTGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MTEATVGTRRPSRRFWLPILILAAATLLVYSVSFFNGFVLDDEMIIVNNPQTLSLSNVPDVLFAPDLIKPYYRPLNRATY
LFDYQVAGMNPAWYHGVNIVIHLGNALLLYLICRRLLSDRWAALAVGLLFAVHPANSEAVNWVSARNTLMALFFSLASLL
AYLEGRMKGKTLLVVSPLLYFCGLLSKETGLMMSAVFFVLTFFPMQEGEARLSWKDRIILLSPYFILTLVYFGMRFYSLQ
GVVGTPVPASGLLERVAQNYHIIPQYLALLLYPADLTLFHKVPQGGLFSPPWHLAAVLFLTWMVWLALSSRNRVALFGLV
WFVINYAPISNIVPIPSDQITERYLYMPAVGFFFGLGAVLSWILARTNLRFAKAAVVVLLVAASAVTVHRNLDWRNALSL
FTSGVRNDPESPGAHYNLGTAYMENGDLAAARREWERTLALNARHGEAMMQMGTLAATGGDLRTAEAYYRAALQTPPGQT
DPNKSMAHLNLGKICEKRGDLKQALQHYRLFMKTVPVTYMEYKGDTERRIKLLEQS

Sequences:

>Translated_536_residues
MTEATVGTRRPSRRFWLPILILAAATLLVYSVSFFNGFVLDDEMIIVNNPQTLSLSNVPDVLFAPDLIKPYYRPLNRATY
LFDYQVAGMNPAWYHGVNIVIHLGNALLLYLICRRLLSDRWAALAVGLLFAVHPANSEAVNWVSARNTLMALFFSLASLL
AYLEGRMKGKTLLVVSPLLYFCGLLSKETGLMMSAVFFVLTFFPMQEGEARLSWKDRIILLSPYFILTLVYFGMRFYSLQ
GVVGTPVPASGLLERVAQNYHIIPQYLALLLYPADLTLFHKVPQGGLFSPPWHLAAVLFLTWMVWLALSSRNRVALFGLV
WFVINYAPISNIVPIPSDQITERYLYMPAVGFFFGLGAVLSWILARTNLRFAKAAVVVLLVAASAVTVHRNLDWRNALSL
FTSGVRNDPESPGAHYNLGTAYMENGDLAAARREWERTLALNARHGEAMMQMGTLAATGGDLRTAEAYYRAALQTPPGQT
DPNKSMAHLNLGKICEKRGDLKQALQHYRLFMKTVPVTYMEYKGDTERRIKLLEQS
>Mature_535_residues
TEATVGTRRPSRRFWLPILILAAATLLVYSVSFFNGFVLDDEMIIVNNPQTLSLSNVPDVLFAPDLIKPYYRPLNRATYL
FDYQVAGMNPAWYHGVNIVIHLGNALLLYLICRRLLSDRWAALAVGLLFAVHPANSEAVNWVSARNTLMALFFSLASLLA
YLEGRMKGKTLLVVSPLLYFCGLLSKETGLMMSAVFFVLTFFPMQEGEARLSWKDRIILLSPYFILTLVYFGMRFYSLQG
VVGTPVPASGLLERVAQNYHIIPQYLALLLYPADLTLFHKVPQGGLFSPPWHLAAVLFLTWMVWLALSSRNRVALFGLVW
FVINYAPISNIVPIPSDQITERYLYMPAVGFFFGLGAVLSWILARTNLRFAKAAVVVLLVAASAVTVHRNLDWRNALSLF
TSGVRNDPESPGAHYNLGTAYMENGDLAAARREWERTLALNARHGEAMMQMGTLAATGGDLRTAEAYYRAALQTPPGQTD
PNKSMAHLNLGKICEKRGDLKQALQHYRLFMKTVPVTYMEYKGDTERRIKLLEQS

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI118766330, Length=573, Percent_Identity=26.5270506108202, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI118766328, Length=573, Percent_Identity=26.5270506108202, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI224809432, Length=558, Percent_Identity=24.910394265233, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI83415184, Length=218, Percent_Identity=31.1926605504587, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI301336134, Length=218, Percent_Identity=31.1926605504587, Blast_Score=80, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI25147174, Length=498, Percent_Identity=27.9116465863454, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17560436, Length=500, Percent_Identity=22.2, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24647123, Length=537, Percent_Identity=28.1191806331471, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI281364285, Length=202, Percent_Identity=30.6930693069307, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581187, Length=178, Percent_Identity=30.3370786516854, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24656717, Length=251, Percent_Identity=27.4900398406374, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI18110006, Length=251, Percent_Identity=27.4900398406374, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161076610, Length=230, Percent_Identity=30, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI19920486, Length=231, Percent_Identity=29.8701298701299, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60164; Mature: 60033

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEATVGTRRPSRRFWLPILILAAATLLVYSVSFFNGFVLDDEMIIVNNPQTLSLSNVPD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCCEEEECCCCC
VLFAPDLIKPYYRPLNRATYLFDYQVAGMNPAWYHGVNIVIHLGNALLLYLICRRLLSDR
HHCCCHHHHHHHHHCCCEEEEEEEEECCCCCCHHCCCEEEEEHHHHHHHHHHHHHHHHHH
WAALAVGLLFAVHPANSEAVNWVSARNTLMALFFSLASLLAYLEGRMKGKTLLVVSPLLY
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
FCGLLSKETGLMMSAVFFVLTFFPMQEGEARLSWKDRIILLSPYFILTLVYFGMRFYSLQ
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECHHHHHHHHHHHHHHHHCC
GVVGTPVPASGLLERVAQNYHIIPQYLALLLYPADLTLFHKVPQGGLFSPPWHLAAVLFL
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEEECCCCCCCCCHHHHHHHHHH
TWMVWLALSSRNRVALFGLVWFVINYAPISNIVPIPSDQITERYLYMPAVGFFFGLGAVL
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SWILARTNLRFAKAAVVVLLVAASAVTVHRNLDWRNALSLFTSGVRNDPESPGAHYNLGT
HHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCCEECCE
AYMENGDLAAARREWERTLALNARHGEAMMQMGTLAATGGDLRTAEAYYRAALQTPPGQT
EEEECCCHHHHHHHHHHHHEECCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCC
DPNKSMAHLNLGKICEKRGDLKQALQHYRLFMKTVPVTYMEYKGDTERRIKLLEQS
CCCCCCHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCC
>Mature Secondary Structure 
TEATVGTRRPSRRFWLPILILAAATLLVYSVSFFNGFVLDDEMIIVNNPQTLSLSNVPD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCCEEEECCCCC
VLFAPDLIKPYYRPLNRATYLFDYQVAGMNPAWYHGVNIVIHLGNALLLYLICRRLLSDR
HHCCCHHHHHHHHHCCCEEEEEEEEECCCCCCHHCCCEEEEEHHHHHHHHHHHHHHHHHH
WAALAVGLLFAVHPANSEAVNWVSARNTLMALFFSLASLLAYLEGRMKGKTLLVVSPLLY
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
FCGLLSKETGLMMSAVFFVLTFFPMQEGEARLSWKDRIILLSPYFILTLVYFGMRFYSLQ
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEECHHHHHHHHHHHHHHHHCC
GVVGTPVPASGLLERVAQNYHIIPQYLALLLYPADLTLFHKVPQGGLFSPPWHLAAVLFL
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEEECCCCCCCCCHHHHHHHHHH
TWMVWLALSSRNRVALFGLVWFVINYAPISNIVPIPSDQITERYLYMPAVGFFFGLGAVL
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SWILARTNLRFAKAAVVVLLVAASAVTVHRNLDWRNALSLFTSGVRNDPESPGAHYNLGT
HHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCCEECCE
AYMENGDLAAARREWERTLALNARHGEAMMQMGTLAATGGDLRTAEAYYRAALQTPPGQT
EEEECCCHHHHHHHHHHHHEECCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCC
DPNKSMAHLNLGKICEKRGDLKQALQHYRLFMKTVPVTYMEYKGDTERRIKLLEQS
CCCCCCHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA