| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is zraS [H]
Identifier: 197117483
GI number: 197117483
Start: 1266700
End: 1267794
Strand: Direct
Name: zraS [H]
Synonym: Gbem_1094
Alternate gene names: 197117483
Gene position: 1266700-1267794 (Clockwise)
Preceding gene: 197117482
Following gene: 197117484
Centisome position: 27.45
GC content: 62.65
Gene sequence:
>1095_bases ATGAAGAGAACTGACCTTGCCCGAGGTACGGTGCTCGTTGCCTGCGTCATAGGGATCAGCCTTTTGCATTACCTCACCCC GCTGCGGCTTGCCATGCTGCACGACATCTTCCAGCGCCTCTACTACATTCCCATCATCCTCGCCGCCTACTGGTTCGGCT TTCGCGGCGGCATCGGCTGCGCCCTGCTGGTCACCTTCTGTTACGCCCCGCACATCCTGTTCCAGTGGGGGGGGCACATC GCCATGGAAATGGAGAAGTACCTCGAGGTGATCCTCTACAACGTGGTAGGGGGGATCACCGGGATGCTCTCGCAGCAGGA ACGGTCCCGCAGGGAGCAGCTTGAGGAGACGGCGAAGGGGCTGGAAGATTCCTACCGGCAGTTGAGGACCCAGTCCGAAC TCATCATCAGGATTGAGGAGCAGTTGCGCCGGGCGGAGCGCCTGTCGGCTCTTGGTGAGCTTTCCGCCATCCTGGCCCAC GAGATACGCAACCCGCTGGCCTCGATACGCGGTACCGCCGAGATCCTCAGGGAGGATGGGGCGGCCGCCAACCGCGACGA GTTCCTGGGGATACTGGTGAAGGAATCTGACCGCCTGAACCACGTGGTGGAGGATTTCCTGCGCATGGCGCGCTCCGAGC CGGCGATCAAGAAAGAGTGCGACATCAACTACGAGCTTGCCAACATGGTAACGCTCCTCTCTGCCCAGGCCCGAGGCGAG GAGGTGGAACTGCGGTTTACTCCCGGGGAGGTTCCGACGCTTTCCGCCGATCCGGAAAAGCTGCGCCAAGCATTCATGAA CGTCATCCTCAACGGGATCCAGGCTTCCGCTCCAGGGGGGCGGGTCCTGGTGACGACGAGCTACGACCGCCAAAGTCGCA GCATCGAGATCCGCTTCAGCGACAACGGCCCCGGCATCGCGCGCGAGGCGATCGGCAAGATCTTCGAACCCTTCTTCACC ACCAAGGGAAGCGGCACCGGCCTCGGGCTCTCCATCACCAAAAAGATACTGGAGGGACACGGCGGGACGCTGGAAGTGGA AAGCACGCCGGGCGAGGGGGCCTGCTTCCGGGCCCGGCTGCCGACGGAAACCTAA
Upstream 100 bases:
>100_bases GCTACGACCCGGAAGGAGCGGATACCGAGACCATCCAGTCGCAGGCCGTGGAGCTCTGCCCGGTCTCCTGCATCGTGTGG GTGGAATGACGGGGAGCGCC
Downstream 100 bases:
>100_bases GTGGCGGGCTGTGGAAAATTCTACGGGGTTGTTGGATATTCTACAGGCTGCGCCGTCAGCTGCCGACGAGGCCGCTAGCG CCGCTAATGATACCTTGCAG
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKRTDLARGTVLVACVIGISLLHYLTPLRLAMLHDIFQRLYYIPIILAAYWFGFRGGIGCALLVTFCYAPHILFQWGGHI AMEMEKYLEVILYNVVGGITGMLSQQERSRREQLEETAKGLEDSYRQLRTQSELIIRIEEQLRRAERLSALGELSAILAH EIRNPLASIRGTAEILREDGAAANRDEFLGILVKESDRLNHVVEDFLRMARSEPAIKKECDINYELANMVTLLSAQARGE EVELRFTPGEVPTLSADPEKLRQAFMNVILNGIQASAPGGRVLVTTSYDRQSRSIEIRFSDNGPGIAREAIGKIFEPFFT TKGSGTGLGLSITKKILEGHGGTLEVESTPGEGACFRARLPTET
Sequences:
>Translated_364_residues MKRTDLARGTVLVACVIGISLLHYLTPLRLAMLHDIFQRLYYIPIILAAYWFGFRGGIGCALLVTFCYAPHILFQWGGHI AMEMEKYLEVILYNVVGGITGMLSQQERSRREQLEETAKGLEDSYRQLRTQSELIIRIEEQLRRAERLSALGELSAILAH EIRNPLASIRGTAEILREDGAAANRDEFLGILVKESDRLNHVVEDFLRMARSEPAIKKECDINYELANMVTLLSAQARGE EVELRFTPGEVPTLSADPEKLRQAFMNVILNGIQASAPGGRVLVTTSYDRQSRSIEIRFSDNGPGIAREAIGKIFEPFFT TKGSGTGLGLSITKKILEGHGGTLEVESTPGEGACFRARLPTET >Mature_364_residues MKRTDLARGTVLVACVIGISLLHYLTPLRLAMLHDIFQRLYYIPIILAAYWFGFRGGIGCALLVTFCYAPHILFQWGGHI AMEMEKYLEVILYNVVGGITGMLSQQERSRREQLEETAKGLEDSYRQLRTQSELIIRIEEQLRRAERLSALGELSAILAH EIRNPLASIRGTAEILREDGAAANRDEFLGILVKESDRLNHVVEDFLRMARSEPAIKKECDINYELANMVTLLSAQARGE EVELRFTPGEVPTLSADPEKLRQAFMNVILNGIQASAPGGRVLVTTSYDRQSRSIEIRFSDNGPGIAREAIGKIFEPFFT TKGSGTGLGLSITKKILEGHGGTLEVESTPGEGACFRARLPTET
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=228, Percent_Identity=39.4736842105263, Blast_Score=172, Evalue=4e-44, Organism=Escherichia coli, GI1788549, Length=238, Percent_Identity=39.0756302521008, Blast_Score=157, Evalue=7e-40, Organism=Escherichia coli, GI1790300, Length=232, Percent_Identity=30.6034482758621, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI87081816, Length=239, Percent_Identity=32.2175732217573, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788393, Length=242, Percent_Identity=27.2727272727273, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786600, Length=216, Percent_Identity=26.3888888888889, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI145693157, Length=306, Percent_Identity=24.1830065359477, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789808, Length=215, Percent_Identity=29.3023255813954, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI48994928, Length=236, Percent_Identity=27.9661016949153, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1790861, Length=210, Percent_Identity=28.0952380952381, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786783, Length=242, Percent_Identity=28.099173553719, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1790346, Length=242, Percent_Identity=28.5123966942149, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI87082128, Length=248, Percent_Identity=28.2258064516129, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1789149, Length=280, Percent_Identity=23.2142857142857, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1786912, Length=239, Percent_Identity=28.4518828451883, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788713, Length=254, Percent_Identity=25.5905511811024, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1790567, Length=99, Percent_Identity=38.3838383838384, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 40482; Mature: 40482
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTDLARGTVLVACVIGISLLHYLTPLRLAMLHDIFQRLYYIPIILAAYWFGFRGGIGC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ALLVTFCYAPHILFQWGGHIAMEMEKYLEVILYNVVGGITGMLSQQERSRREQLEETAKG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEDSYRQLRTQSELIIRIEEQLRRAERLSALGELSAILAHEIRNPLASIRGTAEILREDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AAANRDEFLGILVKESDRLNHVVEDFLRMARSEPAIKKECDINYELANMVTLLSAQARGE CCCCCHHHEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCCC EVELRFTPGEVPTLSADPEKLRQAFMNVILNGIQASAPGGRVLVTTSYDRQSRSIEIRFS EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEC DNGPGIAREAIGKIFEPFFTTKGSGTGLGLSITKKILEGHGGTLEVESTPGEGACFRARL CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEECCC PTET CCCC >Mature Secondary Structure MKRTDLARGTVLVACVIGISLLHYLTPLRLAMLHDIFQRLYYIPIILAAYWFGFRGGIGC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ALLVTFCYAPHILFQWGGHIAMEMEKYLEVILYNVVGGITGMLSQQERSRREQLEETAKG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEDSYRQLRTQSELIIRIEEQLRRAERLSALGELSAILAHEIRNPLASIRGTAEILREDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AAANRDEFLGILVKESDRLNHVVEDFLRMARSEPAIKKECDINYELANMVTLLSAQARGE CCCCCHHHEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHCCCC EVELRFTPGEVPTLSADPEKLRQAFMNVILNGIQASAPGGRVLVTTSYDRQSRSIEIRFS EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEC DNGPGIAREAIGKIFEPFFTTKGSGTGLGLSITKKILEGHGGTLEVESTPGEGACFRARL CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEECCC PTET CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]