Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is exoM [H]

Identifier: 197117465

GI number: 197117465

Start: 1248604

End: 1249521

Strand: Direct

Name: exoM [H]

Synonym: Gbem_1076

Alternate gene names: 197117465

Gene position: 1248604-1249521 (Clockwise)

Preceding gene: 197117464

Following gene: 197117466

Centisome position: 27.05

GC content: 54.68

Gene sequence:

>918_bases
ATGAGTCTATCGCCCATGCACATAACCGTCTGTATTTGCACCTTCAAGAGACCAGAAATGTTGCAGCGCCTGCTGATCAC
GCTTGAGGGGCAGCAAACCGACGGGAAGTTCAGCTATTCGGCGGTGGTCGTCGATAATGATGCCAACCGCTCAGCGTTGG
AAACTATTGCGCTGTTCCAGAAGTATCACACCCTGCCAGTGACCTACCTGGTGGAACCGGAGCAGAACATCGCCCGCGCC
AGGAATAAGGCAGTCGATAATGCGACTGGTGACTTCATCGCCTTCATAGACGATGACGAGTTCCCGGAAAACCGGTGGCT
GCTGCAGATGGTGAATATCTTAGAGGGATCCGGTGCAGCCGGGGTGCTGGGGCCGGTGCGCCCCCATTTTGAAAAGGGGT
GTCCCAAGTGGATCATCAAGAGCGGCCTGTGTGATCGGAAAAGCCACGCCACCGGAACCATTATGCGTTCCGCCGATACC
CGCACAGGAAACGTTCTGATCAGCAGGGAGATCTTCAAAGATACGCGTAACAGGTTCGATCCTGCCTTTGGCAGAAGTGG
CGGCGAGGATGTCAGATTCTTCGAGTACGTTATGCAGAAGGGGCATACTTTCCTCTGGAGCAACGAGGCCTTGGTCTATG
AAACTGTCCCACACGAGCGCTGGAGTGCATCCTTTTATCTACGAAGGGCGGTACGGAAGGGGGGGGTGAGCGGCTCCGTG
ATCAGGAAAAGGGGATTCTCCTTTCGGCACCTTGCTTTCGCTCTCGCAGCTTTCTGCGTCTATGCCACAACCTTGCCCTT
CGCCGTCCTGGCTGGAAAGCACTTCTGCATCAAATGCTTGGTGAAAACGGCTTATCACTTGGCATGGCTTTCGGGGTTTT
TCGGTCACGTTCAGATAGCTCTAAAGGACGACCAGTAG

Upstream 100 bases:

>100_bases
CAAACTCCTTCCCGCCAGCGAACCGTAGGCCCTGAAAAAAAGTCATTTGGCAGGAATCGTCGTAACGCCCCCCAATGGAG
GTTCACAAGGAGAACGCGGG

Downstream 100 bases:

>100_bases
CTCCTTTGACGGCTCAGACTGCCGTCAAGGAAAGGGGGCACCGCGATGTTAGGGATGTTGGCATTACTTGCCTGTTTTGC
CTTAGTCACTTGGCTCTTTG

Product: family glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSLSPMHITVCICTFKRPEMLQRLLITLEGQQTDGKFSYSAVVVDNDANRSALETIALFQKYHTLPVTYLVEPEQNIARA
RNKAVDNATGDFIAFIDDDEFPENRWLLQMVNILEGSGAAGVLGPVRPHFEKGCPKWIIKSGLCDRKSHATGTIMRSADT
RTGNVLISREIFKDTRNRFDPAFGRSGGEDVRFFEYVMQKGHTFLWSNEALVYETVPHERWSASFYLRRAVRKGGVSGSV
IRKRGFSFRHLAFALAAFCVYATTLPFAVLAGKHFCIKCLVKTAYHLAWLSGFFGHVQIALKDDQ

Sequences:

>Translated_305_residues
MSLSPMHITVCICTFKRPEMLQRLLITLEGQQTDGKFSYSAVVVDNDANRSALETIALFQKYHTLPVTYLVEPEQNIARA
RNKAVDNATGDFIAFIDDDEFPENRWLLQMVNILEGSGAAGVLGPVRPHFEKGCPKWIIKSGLCDRKSHATGTIMRSADT
RTGNVLISREIFKDTRNRFDPAFGRSGGEDVRFFEYVMQKGHTFLWSNEALVYETVPHERWSASFYLRRAVRKGGVSGSV
IRKRGFSFRHLAFALAAFCVYATTLPFAVLAGKHFCIKCLVKTAYHLAWLSGFFGHVQIALKDDQ
>Mature_304_residues
SLSPMHITVCICTFKRPEMLQRLLITLEGQQTDGKFSYSAVVVDNDANRSALETIALFQKYHTLPVTYLVEPEQNIARAR
NKAVDNATGDFIAFIDDDEFPENRWLLQMVNILEGSGAAGVLGPVRPHFEKGCPKWIIKSGLCDRKSHATGTIMRSADTR
TGNVLISREIFKDTRNRFDPAFGRSGGEDVRFFEYVMQKGHTFLWSNEALVYETVPHERWSASFYLRRAVRKGGVSGSVI
RKRGFSFRHLAFALAAFCVYATTLPFAVLAGKHFCIKCLVKTAYHLAWLSGFFGHVQIALKDDQ

Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fourth sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the third acetylated sugar and the fourth sugar [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 34381; Mature: 34250

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSPMHITVCICTFKRPEMLQRLLITLEGQQTDGKFSYSAVVVDNDANRSALETIALFQ
CCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHH
KYHTLPVTYLVEPEQNIARARNKAVDNATGDFIAFIDDDEFPENRWLLQMVNILEGSGAA
HHCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCC
GVLGPVRPHFEKGCPKWIIKSGLCDRKSHATGTIMRSADTRTGNVLISREIFKDTRNRFD
CCCCCCCHHHHHCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHCC
PAFGRSGGEDVRFFEYVMQKGHTFLWSNEALVYETVPHERWSASFYLRRAVRKGGVSGSV
CCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHH
IRKRGFSFRHLAFALAAFCVYATTLPFAVLAGKHFCIKCLVKTAYHLAWLSGFFGHVQIA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEE
LKDDQ
EECCC
>Mature Secondary Structure 
SLSPMHITVCICTFKRPEMLQRLLITLEGQQTDGKFSYSAVVVDNDANRSALETIALFQ
CCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHH
KYHTLPVTYLVEPEQNIARARNKAVDNATGDFIAFIDDDEFPENRWLLQMVNILEGSGAA
HHCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCC
GVLGPVRPHFEKGCPKWIIKSGLCDRKSHATGTIMRSADTRTGNVLISREIFKDTRNRFD
CCCCCCCHHHHHCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHCC
PAFGRSGGEDVRFFEYVMQKGHTFLWSNEALVYETVPHERWSASFYLRRAVRKGGVSGSV
CCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHH
IRKRGFSFRHLAFALAAFCVYATTLPFAVLAGKHFCIKCLVKTAYHLAWLSGFFGHVQIA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEE
LKDDQ
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8226645; 8246891; 11481431 [H]