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The map label for this gene is wza [H]

Identifier: 197117458

GI number: 197117458

Start: 1240989

End: 1241672

Strand: Direct

Name: wza [H]

Synonym: Gbem_1069

Alternate gene names: 197117458

Gene position: 1240989-1241672 (Clockwise)

Preceding gene: 197117457

Following gene: 197117459

Centisome position: 26.89

GC content: 55.99

Gene sequence:

>684_bases
ATGAGAGCGGTAACGATTGCCTTTTTTGCTATCTTGACCATAACCACCGGCTGCGTTTCCCGGACAGCGGTCCCTGCAGT
GACCCCGCAGCCGCCTGCATATGCCATGAGCGAATATCGTATTCAGCCAGGGGACCTGCTGGACGTGAAGTTTTTCTACA
ACCCAGAGCTCAACGAATCCCTCACCGTTCGCCCGGATGGCCGCATTACGCTGCAGTTGGTAAATGATGTCGTGGCTGCG
GGGCTAACGCCTGCCGAACTCACGATGAACCTGACCAAAGCTTACGCCCCGGAACTCACCAGCCCCAGGATCGCGGTCAT
CGTGAAGACCTCTGTGCTGGAGCGGGTTTTTGTTGACGGTGAAGTGTTCAAGGCGGGCCTAGTTAATTTGGTAGGCCCGA
CGACGGTGCTGCAGGCTATCTCCCAGGCCGGCGGCATGAAGGACTCTGCCAAGTCCGGTGAGGTGCTTCTGGTCCGCAAG
GCGGCAGATAACTCGACACAGGTGATGCGGCTTGACGTCAAAAAGCTTAGGGAGGGAGTTGCGTCGCAGGACATTCTGCT
GCGCTCTAACGATATTGTGTATGTTCCCAAATCCACCATCGCTAACATCAACACCTGGATCGACATGTACATCAGGAAGA
ACGTCCCGCTGCCGGTTGGCATAGGGTACGACCTAAGTAGGTAA

Upstream 100 bases:

>100_bases
TGCCCGTGCCACTGCTCCGGGCACTCGGGACGCTGGCTTACCGCCATCTTGGCTGAGAGCTGGCAGGACTCCCATGCTGG
GAGAAAGAGGGGGGGTACTA

Downstream 100 bases:

>100_bases
CACACAGAGAACATTCGGGTGACTTAACATGAGTCTGCTAGAGATATTGACACTGCTGTTCAAGCGGAAAAAAGCAATCA
TCGGGATTTTTCTGCTGCTT

Product: polysaccharide biosynthesis/export lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MRAVTIAFFAILTITTGCVSRTAVPAVTPQPPAYAMSEYRIQPGDLLDVKFFYNPELNESLTVRPDGRITLQLVNDVVAA
GLTPAELTMNLTKAYAPELTSPRIAVIVKTSVLERVFVDGEVFKAGLVNLVGPTTVLQAISQAGGMKDSAKSGEVLLVRK
AADNSTQVMRLDVKKLREGVASQDILLRSNDIVYVPKSTIANINTWIDMYIRKNVPLPVGIGYDLSR

Sequences:

>Translated_227_residues
MRAVTIAFFAILTITTGCVSRTAVPAVTPQPPAYAMSEYRIQPGDLLDVKFFYNPELNESLTVRPDGRITLQLVNDVVAA
GLTPAELTMNLTKAYAPELTSPRIAVIVKTSVLERVFVDGEVFKAGLVNLVGPTTVLQAISQAGGMKDSAKSGEVLLVRK
AADNSTQVMRLDVKKLREGVASQDILLRSNDIVYVPKSTIANINTWIDMYIRKNVPLPVGIGYDLSR
>Mature_227_residues
MRAVTIAFFAILTITTGCVSRTAVPAVTPQPPAYAMSEYRIQPGDLLDVKFFYNPELNESLTVRPDGRITLQLVNDVVAA
GLTPAELTMNLTKAYAPELTSPRIAVIVKTSVLERVFVDGEVFKAGLVNLVGPTTVLQAISQAGGMKDSAKSGEVLLVRK
AADNSTQVMRLDVKKLREGVASQDILLRSNDIVYVPKSTIANINTWIDMYIRKNVPLPVGIGYDLSR

Specific function: Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1788376, Length=176, Percent_Identity=28.4090909090909, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 24664; Mature: 24664

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVTIAFFAILTITTGCVSRTAVPAVTPQPPAYAMSEYRIQPGDLLDVKFFYNPELNES
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCEEEEEEEECCCCCCE
LTVRPDGRITLQLVNDVVAAGLTPAELTMNLTKAYAPELTSPRIAVIVKTSVLERVFVDG
EEECCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHCCC
EVFKAGLVNLVGPTTVLQAISQAGGMKDSAKSGEVLLVRKAADNSTQVMRLDVKKLREGV
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEHHHHHCCC
ASQDILLRSNDIVYVPKSTIANINTWIDMYIRKNVPLPVGIGYDLSR
CCCCEEEECCCEEEECCHHHHHHHHHEEEEEECCCCCEEECCCCCCC
>Mature Secondary Structure
MRAVTIAFFAILTITTGCVSRTAVPAVTPQPPAYAMSEYRIQPGDLLDVKFFYNPELNES
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCEEEEEEEECCCCCCE
LTVRPDGRITLQLVNDVVAAGLTPAELTMNLTKAYAPELTSPRIAVIVKTSVLERVFVDG
EEECCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHCCC
EVFKAGLVNLVGPTTVLQAISQAGGMKDSAKSGEVLLVRKAADNSTQVMRLDVKKLREGV
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEHHHHHCCC
ASQDILLRSNDIVYVPKSTIANINTWIDMYIRKNVPLPVGIGYDLSR
CCCCEEEECCCEEEECCHHHHHHHHHEEEEEECCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]