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The map label for this gene is yfdH [C]

Identifier: 197117439

GI number: 197117439

Start: 1221189

End: 1221959

Strand: Reverse

Name: yfdH [C]

Synonym: Gbem_1049

Alternate gene names: 197117439

Gene position: 1221959-1221189 (Counterclockwise)

Preceding gene: 197117440

Following gene: 197117437

Centisome position: 26.48

GC content: 66.15

Gene sequence:

>771_bases
ATGCTTCCGGAAACGACCATTGTCATCGCCGCCTACAACGAACAACAGAGACTGCCGGCAACGCTTAGGAAGATCCAGGC
CTACCTCGCCGCCAAGCAACTGGAGGCGGAGGTCGTGGTGGTCGACGACGGCAGCACGGACGGCACGGCGTCGCTGGTGC
GGGAATTGGCCCAGCGGATGCCGGGGCTCAGGCTGATCAGCTATCCCCGGAACCGGGGCAAAGGGTATGCCCTCAGGCAG
GGGGTGCAGGCGTCCCGGGGGAAGCTGGTGCTGGTGAGCGACGCCGACCTTTCCACCCCGATCGAGGAACTGGAGACCCT
GAAAAGGCTCCTCGCCGCACGCAGCCACCACATCGCCATCGGCTCGCGCGCGCTGCCGCAAAGCGACGTGGTCGAGGCGC
AGCCCCCCTGGCGCCGCAGGATGGGGCGGCTGTTCAACAAAGCGGTCCGGCTCCTGATCACCGACGAGTTCGCCGACACC
CAGTGCGGGTTCAAGCTGTTCCACGGCGAGGTCGCCCGCCGGCTCTTCCGGCAGGCCCGCATAGACCGGTTCGCCTACGA
CGTCGAGATCCTGGCGCTCGCCAGGCGCTACGGCTACAGCGTCGCCGAGGTCCCGATCCGGTGGAGAAACTGCACCGCCT
CAAAAGTGAACCCCGCGCTGGACTCGCTGCAGATGCTGGGCGATCTGGTCAAGATCAGGCTCAACGTAGGCCGCCAGCAG
GACACCCTGGTTCAGCTCGAAAAGCTGCGCTCCAGGTCCCTCAACTCCTGA

Upstream 100 bases:

>100_bases
AGGACTCTGACAGCACCACCAAGTTCAACGCCCAGACCGGGCTGTACTGGAAGGAGTATGCCGACTAGACCACGTGGCCC
AGCGTACGAAGGAGGTTGCC

Downstream 100 bases:

>100_bases
CCTCCCCGACCGGCGCCGGGGCTTGATCCTGCGCCGGCTGCCCCTGCCCCTTCCCTTTCCCAACCAGTCTCACTGCCTCT
TTCCCGTCCATGTTCCTCCC

Product: family glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MLPETTIVIAAYNEQQRLPATLRKIQAYLAAKQLEAEVVVVDDGSTDGTASLVRELAQRMPGLRLISYPRNRGKGYALRQ
GVQASRGKLVLVSDADLSTPIEELETLKRLLAARSHHIAIGSRALPQSDVVEAQPPWRRRMGRLFNKAVRLLITDEFADT
QCGFKLFHGEVARRLFRQARIDRFAYDVEILALARRYGYSVAEVPIRWRNCTASKVNPALDSLQMLGDLVKIRLNVGRQQ
DTLVQLEKLRSRSLNS

Sequences:

>Translated_256_residues
MLPETTIVIAAYNEQQRLPATLRKIQAYLAAKQLEAEVVVVDDGSTDGTASLVRELAQRMPGLRLISYPRNRGKGYALRQ
GVQASRGKLVLVSDADLSTPIEELETLKRLLAARSHHIAIGSRALPQSDVVEAQPPWRRRMGRLFNKAVRLLITDEFADT
QCGFKLFHGEVARRLFRQARIDRFAYDVEILALARRYGYSVAEVPIRWRNCTASKVNPALDSLQMLGDLVKIRLNVGRQQ
DTLVQLEKLRSRSLNS
>Mature_256_residues
MLPETTIVIAAYNEQQRLPATLRKIQAYLAAKQLEAEVVVVDDGSTDGTASLVRELAQRMPGLRLISYPRNRGKGYALRQ
GVQASRGKLVLVSDADLSTPIEELETLKRLLAARSHHIAIGSRALPQSDVVEAQPPWRRRMGRLFNKAVRLLITDEFADT
QCGFKLFHGEVARRLFRQARIDRFAYDVEILALARRYGYSVAEVPIRWRNCTASKVNPALDSLQMLGDLVKIRLNVGRQQ
DTLVQLEKLRSRSLNS

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7019323, Length=241, Percent_Identity=35.6846473029046, Blast_Score=149, Evalue=2e-36,
Organism=Homo sapiens, GI215276969, Length=234, Percent_Identity=32.9059829059829, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI4503363, Length=208, Percent_Identity=24.5192307692308, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1788692, Length=104, Percent_Identity=31.7307692307692, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787259, Length=94, Percent_Identity=35.1063829787234, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788588, Length=211, Percent_Identity=26.0663507109005, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25146207, Length=252, Percent_Identity=35.3174603174603, Blast_Score=140, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI71999402, Length=208, Percent_Identity=25.9615384615385, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6325029, Length=246, Percent_Identity=34.9593495934959, Blast_Score=127, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24582769, Length=241, Percent_Identity=36.5145228215768, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24585265, Length=208, Percent_Identity=28.3653846153846, Blast_Score=94, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 28846; Mature: 28846

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPETTIVIAAYNEQQRLPATLRKIQAYLAAKQLEAEVVVVDDGSTDGTASLVRELAQRM
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHC
PGLRLISYPRNRGKGYALRQGVQASRGKLVLVSDADLSTPIEELETLKRLLAARSHHIAI
CCCEEEECCCCCCCCHHHHHCCHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE
GSRALPQSDVVEAQPPWRRRMGRLFNKAVRLLITDEFADTQCGFKLFHGEVARRLFRQAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
IDRFAYDVEILALARRYGYSVAEVPIRWRNCTASKVNPALDSLQMLGDLVKIRLNVGRQQ
HHHHHHHHHHHHHHHHHCCCEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
DTLVQLEKLRSRSLNS
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLPETTIVIAAYNEQQRLPATLRKIQAYLAAKQLEAEVVVVDDGSTDGTASLVRELAQRM
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHC
PGLRLISYPRNRGKGYALRQGVQASRGKLVLVSDADLSTPIEELETLKRLLAARSHHIAI
CCCEEEECCCCCCCCHHHHHCCHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE
GSRALPQSDVVEAQPPWRRRMGRLFNKAVRLLITDEFADTQCGFKLFHGEVARRLFRQAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
IDRFAYDVEILALARRYGYSVAEVPIRWRNCTASKVNPALDSLQMLGDLVKIRLNVGRQQ
HHHHHHHHHHHHHHHHHCCCEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
DTLVQLEKLRSRSLNS
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]