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The map label for this gene is 197117417

Identifier: 197117417

GI number: 197117417

Start: 1196297

End: 1197514

Strand: Direct

Name: 197117417

Synonym: Gbem_1027

Alternate gene names: NA

Gene position: 1196297-1197514 (Clockwise)

Preceding gene: 197117416

Following gene: 197117418

Centisome position: 25.92

GC content: 63.38

Gene sequence:

>1218_bases
ATGAAATTTTCCGTCGCCACAAACTTCCAGCCCGACCTGATTACCGCGATCAAGGGGTATCCGGTCTCCGAACTCTTCGG
CAAACTCCCCTCCGACAGCGTGGGGGGCGGCCGCGCCTCGTTCATGCTGGCCCCCCTGGGACAGGAGCAGTTCCGGGCCC
ACGTGAGGGAAGCGGGGAAGAACGGGATCGGCTTCAACTACCTGATCAACCCCGCCTGTATGGACAACCGCGAGTTCACC
CGGCAAGGGCAGGCGGCTCTCGACCAGCTCCTGGATTTCGTGGACGGCTGCGGCGTCACCGCGGTCACGGTTTCGCTTCC
TTTCCTGCTGCCGATCATCAAGAAACGGCATCCGCGGCTCAAGGTGCGTGTCGGCGTCTACGCCCGCGTCGACTGCGTCG
CCAAGGCCCGCTTCTGGGAGGATCTCGGGGCGGACTGCATCACGCTGGAATCCATCGCCATCAACCGCGACTTCGGCATG
CTGCAGGCGATACGACAGGCGGTGCAACTGGAGCTGCAGCTCATCGCCAACTCCAACTGCATGATCTTCTGCCCGCTGTC
GGGGCAGCACATGGTGAACCTCTCGCACGCCTCGCAGAAGGGGCACGCCAGCCGCGGCTTCATGATCGATTACTGCGCGC
TCAGGTGCTCGGCGCAGAAACTGGCCGACCCTTCCCTGTACCTTCGTTCCGAGTTCATCCGGCCGGAAGATCTGGGGAGC
TACACCGAACTTGGCTTTAACTCTTTCAAGATACTGGAGCGCGGCGCACCGACCCCGGTCCTTGTCGAGCGGGTCCGCGC
CTACAGCGAAGGACGGTTCTCCGGAAACCTGCTGGACCTGATCCAGCCTTACGGATACAAGAGAGAACCGGGCAAGGGGA
AGGAGCGGCTGAGCGGCCTGCGCAGGTTCGCCCGGTACTTCCTGCGCCCCGGCGTGATCAATTTCGCCGGGTTGGTCCGG
CTGAAACGGCTGGCGGAGAAGCGGGGGCTCATCGAGGAGCTGGAAGGTACGCCGGTCTATCTGGATAACGGGAAGCTGGA
TGGGTTCCTGGCGGGCTTCCGGGGGATCGACTGCCGGAAGACGGATTGCGCGCGCTGCGGCTACTGCGCCGCCTGGACCG
AGAAGGCGGTGCGGGTGGACCCTCTCTACCGCGACGAGATGCTGCGACTGTACCGCGACGCTTTCGACGAAATGTATTCC
GGTGAATTGTGGGACTGA

Upstream 100 bases:

>100_bases
CCGCGGCTGAGCTTGCCGACCTGGCCTCCAAAGCGGGAGCCGGCTCTTTCACCATCAGGCGGGAGCCGTTCTGGCTGCTG
GTCCTCTCGGGGGAAATCGG

Downstream 100 bases:

>100_bases
GGGGGGATCTGTCATGAACAGCAATGTCTTCGTGGGCTCCATCGCCACCGTCGTCCCGCCGTTTTCGGTGGACCAGCAGG
CGGCGGCGGCGCTGATCAAG

Product: peptidase U32 superfamily peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKFSVATNFQPDLITAIKGYPVSELFGKLPSDSVGGGRASFMLAPLGQEQFRAHVREAGKNGIGFNYLINPACMDNREFT
RQGQAALDQLLDFVDGCGVTAVTVSLPFLLPIIKKRHPRLKVRVGVYARVDCVAKARFWEDLGADCITLESIAINRDFGM
LQAIRQAVQLELQLIANSNCMIFCPLSGQHMVNLSHASQKGHASRGFMIDYCALRCSAQKLADPSLYLRSEFIRPEDLGS
YTELGFNSFKILERGAPTPVLVERVRAYSEGRFSGNLLDLIQPYGYKREPGKGKERLSGLRRFARYFLRPGVINFAGLVR
LKRLAEKRGLIEELEGTPVYLDNGKLDGFLAGFRGIDCRKTDCARCGYCAAWTEKAVRVDPLYRDEMLRLYRDAFDEMYS
GELWD

Sequences:

>Translated_405_residues
MKFSVATNFQPDLITAIKGYPVSELFGKLPSDSVGGGRASFMLAPLGQEQFRAHVREAGKNGIGFNYLINPACMDNREFT
RQGQAALDQLLDFVDGCGVTAVTVSLPFLLPIIKKRHPRLKVRVGVYARVDCVAKARFWEDLGADCITLESIAINRDFGM
LQAIRQAVQLELQLIANSNCMIFCPLSGQHMVNLSHASQKGHASRGFMIDYCALRCSAQKLADPSLYLRSEFIRPEDLGS
YTELGFNSFKILERGAPTPVLVERVRAYSEGRFSGNLLDLIQPYGYKREPGKGKERLSGLRRFARYFLRPGVINFAGLVR
LKRLAEKRGLIEELEGTPVYLDNGKLDGFLAGFRGIDCRKTDCARCGYCAAWTEKAVRVDPLYRDEMLRLYRDAFDEMYS
GELWD
>Mature_405_residues
MKFSVATNFQPDLITAIKGYPVSELFGKLPSDSVGGGRASFMLAPLGQEQFRAHVREAGKNGIGFNYLINPACMDNREFT
RQGQAALDQLLDFVDGCGVTAVTVSLPFLLPIIKKRHPRLKVRVGVYARVDCVAKARFWEDLGADCITLESIAINRDFGM
LQAIRQAVQLELQLIANSNCMIFCPLSGQHMVNLSHASQKGHASRGFMIDYCALRCSAQKLADPSLYLRSEFIRPEDLGS
YTELGFNSFKILERGAPTPVLVERVRAYSEGRFSGNLLDLIQPYGYKREPGKGKERLSGLRRFARYFLRPGVINFAGLVR
LKRLAEKRGLIEELEGTPVYLDNGKLDGFLAGFRGIDCRKTDCARCGYCAAWTEKAVRVDPLYRDEMLRLYRDAFDEMYS
GELWD

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 45431; Mature: 45431

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSVATNFQPDLITAIKGYPVSELFGKLPSDSVGGGRASFMLAPLGQEQFRAHVREAGK
CEEEECCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC
NGIGFNYLINPACMDNREFTRQGQAALDQLLDFVDGCGVTAVTVSLPFLLPIIKKRHPRL
CCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCE
KVRVGVYARVDCVAKARFWEDLGADCITLESIAINRDFGMLQAIRQAVQLELQLIANSNC
EEEEEEEEHHHHHHHHHHHHHHCCCEEEEEHEEECCCHHHHHHHHHHHHHHHHEEECCCE
MIFCPLSGQHMVNLSHASQKGHASRGFMIDYCALRCSAQKLADPSLYLRSEFIRPEDLGS
EEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHCCC
YTELGFNSFKILERGAPTPVLVERVRAYSEGRFSGNLLDLIQPYGYKREPGKGKERLSGL
HHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHH
RRFARYFLRPGVINFAGLVRLKRLAEKRGLIEELEGTPVYLDNGKLDGFLAGFRGIDCRK
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHCCCCCCCCC
TDCARCGYCAAWTEKAVRVDPLYRDEMLRLYRDAFDEMYSGELWD
CCHHHCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKFSVATNFQPDLITAIKGYPVSELFGKLPSDSVGGGRASFMLAPLGQEQFRAHVREAGK
CEEEECCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC
NGIGFNYLINPACMDNREFTRQGQAALDQLLDFVDGCGVTAVTVSLPFLLPIIKKRHPRL
CCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCE
KVRVGVYARVDCVAKARFWEDLGADCITLESIAINRDFGMLQAIRQAVQLELQLIANSNC
EEEEEEEEHHHHHHHHHHHHHHCCCEEEEEHEEECCCHHHHHHHHHHHHHHHHEEECCCE
MIFCPLSGQHMVNLSHASQKGHASRGFMIDYCALRCSAQKLADPSLYLRSEFIRPEDLGS
EEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHCCC
YTELGFNSFKILERGAPTPVLVERVRAYSEGRFSGNLLDLIQPYGYKREPGKGKERLSGL
HHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHH
RRFARYFLRPGVINFAGLVRLKRLAEKRGLIEELEGTPVYLDNGKLDGFLAGFRGIDCRK
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHCCCCCCCCC
TDCARCGYCAAWTEKAVRVDPLYRDEMLRLYRDAFDEMYSGELWD
CCHHHCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]