Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117401

Identifier: 197117401

GI number: 197117401

Start: 1168675

End: 1169544

Strand: Direct

Name: 197117401

Synonym: Gbem_1011

Alternate gene names: NA

Gene position: 1168675-1169544 (Clockwise)

Preceding gene: 197117400

Following gene: 197117402

Centisome position: 25.32

GC content: 63.22

Gene sequence:

>870_bases
GTGGAGCTGCATTACGCCAGGCTGCTGTTCACCTTTACCCTCTCGTCGGATCTTCCTGACCCCCACGCTTTTTTTGTCAC
CCGCGCCGAGTTCGAGAGCGCCTTCCGTAGTTCTCTTGCCTGCCGCAGGTCCGACTGCGCCGGCTGTCTTTCGGCGGCCC
CCTGTCCCTTTCCCGCCACCTTCGGGCAGCAGATAGCCAAGGACCCGGAAGCGGTCCGGCGGCACCAGAAGCCGCCGCTT
CCCTTCATCTTCCAGTTCCCTGTGCTACCTCCATCCCCTAACCGCGGCACGAACCATCAGCTGGCGCTACACCTGGTCGG
TAGCGCGGTTCAGCATGTCTCCTCTTACCTTTGTGCGGTGCGGGTTCTCGTGGAATCCAGGAAAGGGCGTGTCTTGCGGG
TGGAAGCGGAGGCTCCGGGAGGAGGGCGTACCCCGATTGACGCTGCCGGCGGCGTCCCGCTGCTCAGTTCCCAGGATCCG
GTGCTGGCAGGACCGCTTTCGACGGAGACGGTGACCCTGCAGTTGCTCACCCCGCTGAAACTCGTCAATGAGGGAAGGCT
GCTGAAGACCTTCACCTTTGCCCAATTCGCGCGGTCGCTGATGCGCCGCATCTCCTCGCTTGCTTATCATTACGAGGGGG
CGGAGCCGTCCCTCGATTACCGCTGGCTGTCCCAGAGCAGCGAAGCCGTGGAAACCCTCGAGTACGGCTGCCGGCTGGTC
TCGTGGAACGGCCGCCCGGCGGGGATCGCCGGAACCGCGGTATTTGGCGGCGATCTCGAGCCGTTTCACCTGCTCTTGCA
ACTTGGGATGGCCACCCATCTCGGCAAGGGGGCTTCATTTGGCTTTGGCTCTTACCGCGTAAAGAGTTGA

Upstream 100 bases:

>100_bases
CGGTTTAAAGCCCCCTCTGAAGGGGACTGGCTCCGCAAGGTGCCGGTCCCCCTTCAGCGAGCTCGCAGCGCGGCTGCGCC
CAAAGAAGTGGAGATTATTT

Downstream 100 bases:

>100_bases
GCCTTTTCCTGCCGCTTTAAGACCCCACTGCCGCACCGCAACGCGATTAGAACCCCTGCTAGAGCAGATTAATCTCTTGT
AATGATAGTTATCTCAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MELHYARLLFTFTLSSDLPDPHAFFVTRAEFESAFRSSLACRRSDCAGCLSAAPCPFPATFGQQIAKDPEAVRRHQKPPL
PFIFQFPVLPPSPNRGTNHQLALHLVGSAVQHVSSYLCAVRVLVESRKGRVLRVEAEAPGGGRTPIDAAGGVPLLSSQDP
VLAGPLSTETVTLQLLTPLKLVNEGRLLKTFTFAQFARSLMRRISSLAYHYEGAEPSLDYRWLSQSSEAVETLEYGCRLV
SWNGRPAGIAGTAVFGGDLEPFHLLLQLGMATHLGKGASFGFGSYRVKS

Sequences:

>Translated_289_residues
MELHYARLLFTFTLSSDLPDPHAFFVTRAEFESAFRSSLACRRSDCAGCLSAAPCPFPATFGQQIAKDPEAVRRHQKPPL
PFIFQFPVLPPSPNRGTNHQLALHLVGSAVQHVSSYLCAVRVLVESRKGRVLRVEAEAPGGGRTPIDAAGGVPLLSSQDP
VLAGPLSTETVTLQLLTPLKLVNEGRLLKTFTFAQFARSLMRRISSLAYHYEGAEPSLDYRWLSQSSEAVETLEYGCRLV
SWNGRPAGIAGTAVFGGDLEPFHLLLQLGMATHLGKGASFGFGSYRVKS
>Mature_289_residues
MELHYARLLFTFTLSSDLPDPHAFFVTRAEFESAFRSSLACRRSDCAGCLSAAPCPFPATFGQQIAKDPEAVRRHQKPPL
PFIFQFPVLPPSPNRGTNHQLALHLVGSAVQHVSSYLCAVRVLVESRKGRVLRVEAEAPGGGRTPIDAAGGVPLLSSQDP
VLAGPLSTETVTLQLLTPLKLVNEGRLLKTFTFAQFARSLMRRISSLAYHYEGAEPSLDYRWLSQSSEAVETLEYGCRLV
SWNGRPAGIAGTAVFGGDLEPFHLLLQLGMATHLGKGASFGFGSYRVKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31426; Mature: 31426

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELHYARLLFTFTLSSDLPDPHAFFVTRAEFESAFRSSLACRRSDCAGCLSAAPCPFPAT
CCCHHEEEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
FGQQIAKDPEAVRRHQKPPLPFIFQFPVLPPSPNRGTNHQLALHLVGSAVQHVSSYLCAV
HHHHHHCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
RVLVESRKGRVLRVEAEAPGGGRTPIDAAGGVPLLSSQDPVLAGPLSTETVTLQLLTPLK
HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECHHH
LVNEGRLLKTFTFAQFARSLMRRISSLAYHYEGAEPSLDYRWLSQSSEAVETLEYGCRLV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHCCEEE
SWNGRPAGIAGTAVFGGDLEPFHLLLQLGMATHLGKGASFGFGSYRVKS
EECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
>Mature Secondary Structure
MELHYARLLFTFTLSSDLPDPHAFFVTRAEFESAFRSSLACRRSDCAGCLSAAPCPFPAT
CCCHHEEEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
FGQQIAKDPEAVRRHQKPPLPFIFQFPVLPPSPNRGTNHQLALHLVGSAVQHVSSYLCAV
HHHHHHCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
RVLVESRKGRVLRVEAEAPGGGRTPIDAAGGVPLLSSQDPVLAGPLSTETVTLQLLTPLK
HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECHHH
LVNEGRLLKTFTFAQFARSLMRRISSLAYHYEGAEPSLDYRWLSQSSEAVETLEYGCRLV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHCCEEE
SWNGRPAGIAGTAVFGGDLEPFHLLLQLGMATHLGKGASFGFGSYRVKS
EECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA