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The map label for this gene is 197117377

Identifier: 197117377

GI number: 197117377

Start: 1144926

End: 1145240

Strand: Direct

Name: 197117377

Synonym: Gbem_0987

Alternate gene names: NA

Gene position: 1144926-1145240 (Clockwise)

Preceding gene: 197117376

Following gene: 197117381

Centisome position: 24.81

GC content: 62.86

Gene sequence:

>315_bases
ATGAGGAGCAGGCCGAAGGAGCCGCGCGTTCCTCCGGACCGGCGCGAGACGGTGCGCCACGAGATCGTTTCGCTTTTGAC
CGGCGAGAGCATGACGGCCAGGGAGATTTCAGGGCAGGTGGGGATTGGCGAGAAAGAGGTGCTGGAGCACCTGGGGCACA
TACGAACCGCACTCCGAAGCAGGCTAGTGGTGACACCTCCTGCCTGCCTGGAGTGCGGTTTTTCTTTTCGGAAACGGGAG
CGGTTGGGAAAGCCCGGACGCTGCCCGGTATGCCGCAGCGAACGTATCGTCGACCCGTCCTACACCATCGACTAG

Upstream 100 bases:

>100_bases
GGACGGTGCCGACCCCGAACAATAAGAGGGCGGCGGAGTCGGACGTGTGGTACGTGCTGGGGGTGAACGAGGTGGTCAAC
AAGCTGGTCTTGACTGGGCT

Downstream 100 bases:

>100_bases
CCTTTTATTTCAGACATCCAAGACCACCGTCGCACGCCAACCCTCGTCGGTTTTTTCCACCGCGTATCTCAGCATGGTAA
CTGCCTTAACGTCGGTGTTC

Product: helix-turn-helix/zinc ribbon transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix/Zinc Ribbon Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MRSRPKEPRVPPDRRETVRHEIVSLLTGESMTAREISGQVGIGEKEVLEHLGHIRTALRSRLVVTPPACLECGFSFRKRE
RLGKPGRCPVCRSERIVDPSYTID

Sequences:

>Translated_104_residues
MRSRPKEPRVPPDRRETVRHEIVSLLTGESMTAREISGQVGIGEKEVLEHLGHIRTALRSRLVVTPPACLECGFSFRKRE
RLGKPGRCPVCRSERIVDPSYTID
>Mature_104_residues
MRSRPKEPRVPPDRRETVRHEIVSLLTGESMTAREISGQVGIGEKEVLEHLGHIRTALRSRLVVTPPACLECGFSFRKRE
RLGKPGRCPVCRSERIVDPSYTID

Specific function: Unknown

COG id: COG3357

COG function: function code K; Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11791; Mature: 11791

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRPKEPRVPPDRRETVRHEIVSLLTGESMTAREISGQVGIGEKEVLEHLGHIRTALRS
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHC
RLVVTPPACLECGFSFRKRERLGKPGRCPVCRSERIVDPSYTID
CCCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSRPKEPRVPPDRRETVRHEIVSLLTGESMTAREISGQVGIGEKEVLEHLGHIRTALRS
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHC
RLVVTPPACLECGFSFRKRERLGKPGRCPVCRSERIVDPSYTID
CCCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA