| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117274
Identifier: 197117274
GI number: 197117274
Start: 1037304
End: 1037669
Strand: Direct
Name: 197117274
Synonym: Gbem_0884
Alternate gene names: NA
Gene position: 1037304-1037669 (Clockwise)
Preceding gene: 197117273
Following gene: 197117276
Centisome position: 22.48
GC content: 58.2
Gene sequence:
>366_bases ATGCGTAGATTCATGACAACAGCATTGGCGGTTTTCCTTCTGCTTCCGCTTTCGGGCCTAGCCGCGGGGCAGATGCCGCA GAGCCCGCTAGGTCAGCACGCTCCGGCGCAGAAGTATCCCAAGGTAGTACTGTTCTCGACCTCGTGGTGCCCGCACTGCA AGGCCGCGAAGGAATTTTTCACCCGCAACGACATCCCCTTCATCAACCGCGACGTCGAACTCGACAGCGATGCGATGGAG CTTTTGACCGGGAAGTACAAAAGCCAGGGAGTGCCGGTCATCGTGATTGGGGATGACGCCCAGGTGCTGAAGGGATTCGA CGAGGGGCGGGTGCGAAAGGCCTTGGATCAATACCGGAAGAAGTAA
Upstream 100 bases:
>100_bases CGGCGGCCGGGGAACCCGAAGACGCTCAGTTTCAACATGGTGCGGCGGCAGTTGAAGCTTGATGGGGCCGGGAAAAAAGG TACCCAAAAGGGGGAGTGAC
Downstream 100 bases:
>100_bases CCTGGCGGGCAGCATGAGAGGCACACGAAGGGGGGCGCGATGCGCTCCCTTTTTTTATCCCTGCACTTCGGCCTCTTCGG CCAGAACCTCCAGAAGGACC
Product: glutaredoxin family protein
Products: NA
Alternate protein names: Glutaredoxin; Glutaredoxin Family Protein; YruB Family Glutaredoxin-Like Protein; Glutaredoxin Domain Protein; Glutaredoxin-Like Protein YruB
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MRRFMTTALAVFLLLPLSGLAAGQMPQSPLGQHAPAQKYPKVVLFSTSWCPHCKAAKEFFTRNDIPFINRDVELDSDAME LLTGKYKSQGVPVIVIGDDAQVLKGFDEGRVRKALDQYRKK
Sequences:
>Translated_121_residues MRRFMTTALAVFLLLPLSGLAAGQMPQSPLGQHAPAQKYPKVVLFSTSWCPHCKAAKEFFTRNDIPFINRDVELDSDAME LLTGKYKSQGVPVIVIGDDAQVLKGFDEGRVRKALDQYRKK >Mature_121_residues MRRFMTTALAVFLLLPLSGLAAGQMPQSPLGQHAPAQKYPKVVLFSTSWCPHCKAAKEFFTRNDIPFINRDVELDSDAME LLTGKYKSQGVPVIVIGDDAQVLKGFDEGRVRKALDQYRKK
Specific function: Unknown
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13526; Mature: 13526
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFMTTALAVFLLLPLSGLAAGQMPQSPLGQHAPAQKYPKVVLFSTSWCPHCKAAKEFF CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH TRNDIPFINRDVELDSDAMELLTGKYKSQGVPVIVIGDDAQVLKGFDEGRVRKALDQYRK HCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHC K C >Mature Secondary Structure MRRFMTTALAVFLLLPLSGLAAGQMPQSPLGQHAPAQKYPKVVLFSTSWCPHCKAAKEFF CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH TRNDIPFINRDVELDSDAMELLTGKYKSQGVPVIVIGDDAQVLKGFDEGRVRKALDQYRK HCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA