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The map label for this gene is lptA [C]

Identifier: 197117259

GI number: 197117259

Start: 1022783

End: 1023271

Strand: Direct

Name: lptA [C]

Synonym: Gbem_0867

Alternate gene names: 197117259

Gene position: 1022783-1023271 (Clockwise)

Preceding gene: 308535200

Following gene: 197117260

Centisome position: 22.16

GC content: 59.71

Gene sequence:

>489_bases
ATGCGGAGCGTCTTTTGCCAATTAATACTGTTGCTGCTGCTCGTTTCGGGGGCTGTTGCCGCGCCGATAAGCGGAAATGA
GCCCCTGAAGGTTAAGTCCGACAACTTAACTGCCGATAACGAGAAGAAGACGGCGACCTTCGAGGGGAAGGTGGTTGCCC
ACCAGGGCGAGCTGACCCTGTACACGGACCGGCTGGTGGTGAGTTCCGCCGGCGACGGCAACGAGCTCTCCAAGGTGGAG
GCATTCGGCAACGTCAGGATTCTGCAGGGGATTCGGCAGGCTACCGGGGGGCACGCGGTCTACGACCCGAAGCGGGGGGT
GATTTTGTTGGACGGCAACCCCAGGGTCGTGGTAGGGGATGACGTGGTGACCGGGAAGGTTATTACCTACTTCATCAACG
AGCAGAGAAGCATTGTAACCGGCGGCCCGAAGGAGCGGGTGGAAGCGGTCATTCACCCCGGAGGGAAAAATGTCGGCGCA
AAACCGTAG

Upstream 100 bases:

>100_bases
ACGAACTGGAAGGGGTAGGGATGGAGTTTCAGACGCAGACACGGAGGTTCAAGTTGAAAAAGGACGTGAGCGCCGTATTT
CGGCAGCAGGAGGCCAGGTG

Downstream 100 bases:

>100_bases
CACCCTCTGCACCAAGGGGCTTGAGAAGGGGTTCAACAAGCGCATGGTAGTGCGCGGCGTGGACCTCGAGGTCTCGTCGG
GAGAGGTGGTTGGGCTTTTG

Product: cell envelope biogenesis ABC transporter periplasmic protein

Products: NA

Alternate protein names: Lipopolysaccharide Transport Periplasmic Protein LptA; OstA-Like Protein; Organic Solvent lerance Protein

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MRSVFCQLILLLLLVSGAVAAPISGNEPLKVKSDNLTADNEKKTATFEGKVVAHQGELTLYTDRLVVSSAGDGNELSKVE
AFGNVRILQGIRQATGGHAVYDPKRGVILLDGNPRVVVGDDVVTGKVITYFINEQRSIVTGGPKERVEAVIHPGGKNVGA
KP

Sequences:

>Translated_162_residues
MRSVFCQLILLLLLVSGAVAAPISGNEPLKVKSDNLTADNEKKTATFEGKVVAHQGELTLYTDRLVVSSAGDGNELSKVE
AFGNVRILQGIRQATGGHAVYDPKRGVILLDGNPRVVVGDDVVTGKVITYFINEQRSIVTGGPKERVEAVIHPGGKNVGA
KP
>Mature_162_residues
MRSVFCQLILLLLLVSGAVAAPISGNEPLKVKSDNLTADNEKKTATFEGKVVAHQGELTLYTDRLVVSSAGDGNELSKVE
AFGNVRILQGIRQATGGHAVYDPKRGVILLDGNPRVVVGDDVVTGKVITYFINEQRSIVTGGPKERVEAVIHPGGKNVGA
KP

Specific function: Unknown

COG id: COG1934

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17158; Mature: 17158

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVFCQLILLLLLVSGAVAAPISGNEPLKVKSDNLTADNEKKTATFEGKVVAHQGELTL
CHHHHHHHHHHHHHHCCCEECCCCCCCCEEEECCCCCCCCCCCEEEECCEEEEECCCEEE
YTDRLVVSSAGDGNELSKVEAFGNVRILQGIRQATGGHAVYDPKRGVILLDGNPRVVVGD
EEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCEEEECCCCEEEECC
DVVTGKVITYFINEQRSIVTGGPKERVEAVIHPGGKNVGAKP
CEEECEEEEEEECCCCEEEECCCHHHEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRSVFCQLILLLLLVSGAVAAPISGNEPLKVKSDNLTADNEKKTATFEGKVVAHQGELTL
CHHHHHHHHHHHHHHCCCEECCCCCCCCEEEECCCCCCCCCCCEEEECCEEEEECCCEEE
YTDRLVVSSAGDGNELSKVEAFGNVRILQGIRQATGGHAVYDPKRGVILLDGNPRVVVGD
EEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCEEEECCCCEEEECC
DVVTGKVITYFINEQRSIVTGGPKERVEAVIHPGGKNVGAKP
CEEECEEEEEEECCCCEEEECCCHHHEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA