Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116742

Identifier: 197116742

GI number: 197116742

Start: 418055

End: 418411

Strand: Reverse

Name: 197116742

Synonym: Gbem_0342

Alternate gene names: NA

Gene position: 418411-418055 (Counterclockwise)

Preceding gene: 197116743

Following gene: 197116741

Centisome position: 9.07

GC content: 42.58

Gene sequence:

>357_bases
ATGGAAACTAATGCTGTCAAAGATAAGTCTTTCGCATTCGCATTGAGAATCATCAAGTTGTATCAGTATCTTTGCGAGCG
AAAGGAGTTTGTGATCAGCAAGCAGTTGCTGAGGTCCGGCACCGCTGTCGGTGCACTGGTGCGCGAAGCCGAACAGGCGG
AAAGTAGAGCCGACTTTATTCACAAATTGGCAATAGCCCTGAAAGAAGCCAACGAAACAGAGTACTGGCTAGAACTCCTC
CACCAGTCCAATTATCTTGAAGATAAAAATTACCAATCGATATCTTCAGATTCAAAATGCTTACTAAGACTACTGACCTC
CATAATTAAAACGACGAAGATGCACAACAAAAAATAA

Upstream 100 bases:

>100_bases
TTGACAATTGACAATTGACAACGAAAACCGTGGAGAGGCAATTAAGGCTAAAACCCAATTGATAATTGACAATTGATAAT
TGACGATTACAACCTTTCGG

Downstream 100 bases:

>100_bases
CCATTGTCAATTGTCAATTGTCAATCGTCAATTGGTTCAAAGGGTTTCTTCATGCTAACGCAAATAAACAACATCCGCCT
CGCCTACGACGACCTCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
METNAVKDKSFAFALRIIKLYQYLCERKEFVISKQLLRSGTAVGALVREAEQAESRADFIHKLAIALKEANETEYWLELL
HQSNYLEDKNYQSISSDSKCLLRLLTSIIKTTKMHNKK

Sequences:

>Translated_118_residues
METNAVKDKSFAFALRIIKLYQYLCERKEFVISKQLLRSGTAVGALVREAEQAESRADFIHKLAIALKEANETEYWLELL
HQSNYLEDKNYQSISSDSKCLLRLLTSIIKTTKMHNKK
>Mature_118_residues
METNAVKDKSFAFALRIIKLYQYLCERKEFVISKQLLRSGTAVGALVREAEQAESRADFIHKLAIALKEANETEYWLELL
HQSNYLEDKNYQSISSDSKCLLRLLTSIIKTTKMHNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13670; Mature: 13670

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METNAVKDKSFAFALRIIKLYQYLCERKEFVISKQLLRSGTAVGALVREAEQAESRADFI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
HKLAIALKEANETEYWLELLHQSNYLEDKNYQSISSDSKCLLRLLTSIIKTTKMHNKK
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
METNAVKDKSFAFALRIIKLYQYLCERKEFVISKQLLRSGTAVGALVREAEQAESRADFI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
HKLAIALKEANETEYWLELLHQSNYLEDKNYQSISSDSKCLLRLLTSIIKTTKMHNKK
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA