Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116720

Identifier: 197116720

GI number: 197116720

Start: 393181

End: 393639

Strand: Direct

Name: 197116720

Synonym: Gbem_0320

Alternate gene names: NA

Gene position: 393181-393639 (Clockwise)

Preceding gene: 197116719

Following gene: 197116721

Centisome position: 8.52

GC content: 53.81

Gene sequence:

>459_bases
GTGAATATTGTGTGGTGGCACTGGCTCACCTTGGGGCTTATTCTCATTGGGCTCGAATTAATCATTCCATCCTTCACCAT
CATCTGGTTCGGTCTCGGTGCTGTTATTGTCAGCATCGTCCTGGCCTCCCTTCCGAGTTGTCCCCTTTCCGTTCAAATTC
TCATCTGGACCGTGGCATCGGCACTGCTCACCTTTGCCTGGTTCCGTTTTTTCAATACCCGCCTCGACAGGACCAAGGCC
GGATCGTCAAAGGGAGCCGTGATAGGCGAGACGGGATTGGTAATTCGTGGCGCCCAGCAATACGACAAGGGAACAGTGAA
GTTCCATCTGCCGCTGCTGGGAGCGGACGAGTGGCCGTGTGTGGCGGATGATCCTTTAGCGGTTGGAGATCGCGTCCGGG
TAGTCGACGTGGAAGGACATGTCATGAAGGTCGAAAAAATAGCAAAAGGGGATAAGTGA

Upstream 100 bases:

>100_bases
CCTGATTCCATTAACAGCTTTTTTGATTGTTTGTCATTAATGCCGGTGATATGCTGCCGCAGCGATCAGTAGTTTTTGTT
CAATCGTTGCGGAGGCTTCT

Downstream 100 bases:

>100_bases
TGGAACCAGCAGCAGTAGTGTTCGCAATATTGTTTTTAGTCGTCGTAGTGACCATCTTCATGGGCGTGCGGCTCGTCCCG
CAGGGGTTCGAGTTCGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MNIVWWHWLTLGLILIGLELIIPSFTIIWFGLGAVIVSIVLASLPSCPLSVQILIWTVASALLTFAWFRFFNTRLDRTKA
GSSKGAVIGETGLVIRGAQQYDKGTVKFHLPLLGADEWPCVADDPLAVGDRVRVVDVEGHVMKVEKIAKGDK

Sequences:

>Translated_152_residues
MNIVWWHWLTLGLILIGLELIIPSFTIIWFGLGAVIVSIVLASLPSCPLSVQILIWTVASALLTFAWFRFFNTRLDRTKA
GSSKGAVIGETGLVIRGAQQYDKGTVKFHLPLLGADEWPCVADDPLAVGDRVRVVDVEGHVMKVEKIAKGDK
>Mature_152_residues
MNIVWWHWLTLGLILIGLELIIPSFTIIWFGLGAVIVSIVLASLPSCPLSVQILIWTVASALLTFAWFRFFNTRLDRTKA
GSSKGAVIGETGLVIRGAQQYDKGTVKFHLPLLGADEWPCVADDPLAVGDRVRVVDVEGHVMKVEKIAKGDK

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16696; Mature: 16696

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVWWHWLTLGLILIGLELIIPSFTIIWFGLGAVIVSIVLASLPSCPLSVQILIWTVAS
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALLTFAWFRFFNTRLDRTKAGSSKGAVIGETGLVIRGAQQYDKGTVKFHLPLLGADEWPC
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCCCCCCCEEEEEEEEECCCCCCC
VADDPLAVGDRVRVVDVEGHVMKVEKIAKGDK
CCCCCCCCCCEEEEEECCCCEEHHHHHCCCCC
>Mature Secondary Structure
MNIVWWHWLTLGLILIGLELIIPSFTIIWFGLGAVIVSIVLASLPSCPLSVQILIWTVAS
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALLTFAWFRFFNTRLDRTKAGSSKGAVIGETGLVIRGAQQYDKGTVKFHLPLLGADEWPC
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCCCCCCCEEEEEEEEECCCCCCC
VADDPLAVGDRVRVVDVEGHVMKVEKIAKGDK
CCCCCCCCCCEEEEEECCCCEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA