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The map label for this gene is spoVR [H]

Identifier: 197116655

GI number: 197116655

Start: 301375

End: 303000

Strand: Direct

Name: spoVR [H]

Synonym: Gbem_0255

Alternate gene names: 197116655

Gene position: 301375-303000 (Clockwise)

Preceding gene: 197116654

Following gene: 197116656

Centisome position: 6.53

GC content: 58.79

Gene sequence:

>1626_bases
ATGGAACTGATCAACCAACATACCAAAGAGATCATGGAAGGGTGCAAGGAGCGGGCGCGCGCCGCCGGACTCTCTTTCAC
CGACGAGAGCCTCGAATATATCGTGACCAACCGCGACCTGATCGAGCTCTCCCCCAAGGTCATGATCCCTACTCTTTACG
ACTACTGGGTGCACGACGTCGAGGTGCTCCGGGGGAAGGGGGAGTACGAACTCTACCCTCATAACCCTTACGAGACGGTG
ATCAATACCCGTCCCCCGATTTCGTTCTACAACGACAACAATCCCGACTGGCTCAACGTGATGATCTTCTACCACGTGCT
GGGGCACATCGATTTCTTCCAGAACAACCTCTACTTCCGCCATACCTGGGAGTACGACTTCACCGGGCAGGCGCTTTCGG
ACAAGAGGGTGATCGCCAAGCTGCGCGCAGAGAAGGGGCGCTGGGTGGATTACATCCTTGAGTTCGCCCGATCCATCGAC
AACCTGGTCGCCTACCACGATGAACTGTCGCCGCTCTTCAAGTCTCCCGATACCGTTACTTCGAGCCGGCTCGACTACTA
TTTCGACGTCTTCCTGCAGGTGGAGAAGAAGTTGCCGGTGGCCGAATACCTGAAGGAGGTGGCGCGCTACAACGAAGCGG
TCCTCCAGGACAAAGAGGAAGGGGAGCGGGTCTTCTTCGCGGAGGTGACGACCAAGTATCCGGAAATGGAGGCGCATTTC
GCTAAGAGCCGGAACGTGAAAAGGGTGGAGCGGCGCGACCTGCTTCGCTTCCTGATCGAGAACTCGGAATTCCTGGCCCG
TGACGAGAACCGCTGGATGCGCTCGGTGCTCGAGGTGGTGAGGAAAACCTCCATTTTCTTTCAGCCGCAGATCCGCACCA
AGATCATGAACGAGGGGTGGGCGAGCTACTGGCATGAGAAGCTTTTCCTTGTGGATGACCGCATCAAGGGGCACGAGGTC
GACTTTGCCCGCGTGCATGCCGGGGTCACGTCCATGCCCCGAGTGGGTATGAACCCGTACGCGCTCGGCATGCGCCTCAT
GTACCAGTTGAAGGATATGGGGGACAAGGGGAGGACAGGGTACGACTTCCACCGCCTCTCCGACGCGAACCAGCGGAAGG
AGTTCGACGCGAAGACCGAGCAGGGGGACGAGTTCCTGTTCAAGGTCAGGAGCAACTACTGCGACTACCTCTTCATCAAG
GAGTTCGTGGACCAGGACTTCACCAACCGCTACGACCTCTTCGTCACCGGAAAGAGGCTGGACCCGCAGCGCATGGTCTG
GCAGTACTACGTGAAGAGCCGCGACGCGCGCGAGTACCGGGACATGGTGCTTGCCTCGCTGTACCACCCGCCGCATATAG
AGATAGCACCGGAGCGGGGCGAGGACGGCTCTCTGTACCTCGTGCACCACTTCGAGGGGAAACAACTGGTCTCGGAGTAC
ATCGCCAACACCATGGTGGGTATAGAGTACCTCTGGGGGGCGCCGGTACAGCTTGAGACCAGCGAGGCGGTGATCGAACA
GACCCGCGGCACCGCCGGCAAGGAGGGTGGTGAGGAAGCGGACATCACCTGGCAGCGCGTAGTCTATACCATGAACGAAA
AAACCTTGAGCCGGCAGGTACTGTGA

Upstream 100 bases:

>100_bases
TAAGAATAAGAGGTGAAGCAGATTGAGACAAGATAAGGCCGACTTATAACGCTTCTTCTCAATCTTAATCTTAATCTCGC
TGTTAGCCTTTGAGGCCGTT

Downstream 100 bases:

>100_bases
CAGGCGGATAAGCTCATGCCAGATCTACAGACAGTGATAAAGCAGTTGAGCCGCACCATCGTGGAGCACAAGAACGCGGC
GCACATGTCCTTCGAGGAGT

Product: SpoVR-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MELINQHTKEIMEGCKERARAAGLSFTDESLEYIVTNRDLIELSPKVMIPTLYDYWVHDVEVLRGKGEYELYPHNPYETV
INTRPPISFYNDNNPDWLNVMIFYHVLGHIDFFQNNLYFRHTWEYDFTGQALSDKRVIAKLRAEKGRWVDYILEFARSID
NLVAYHDELSPLFKSPDTVTSSRLDYYFDVFLQVEKKLPVAEYLKEVARYNEAVLQDKEEGERVFFAEVTTKYPEMEAHF
AKSRNVKRVERRDLLRFLIENSEFLARDENRWMRSVLEVVRKTSIFFQPQIRTKIMNEGWASYWHEKLFLVDDRIKGHEV
DFARVHAGVTSMPRVGMNPYALGMRLMYQLKDMGDKGRTGYDFHRLSDANQRKEFDAKTEQGDEFLFKVRSNYCDYLFIK
EFVDQDFTNRYDLFVTGKRLDPQRMVWQYYVKSRDAREYRDMVLASLYHPPHIEIAPERGEDGSLYLVHHFEGKQLVSEY
IANTMVGIEYLWGAPVQLETSEAVIEQTRGTAGKEGGEEADITWQRVVYTMNEKTLSRQVL

Sequences:

>Translated_541_residues
MELINQHTKEIMEGCKERARAAGLSFTDESLEYIVTNRDLIELSPKVMIPTLYDYWVHDVEVLRGKGEYELYPHNPYETV
INTRPPISFYNDNNPDWLNVMIFYHVLGHIDFFQNNLYFRHTWEYDFTGQALSDKRVIAKLRAEKGRWVDYILEFARSID
NLVAYHDELSPLFKSPDTVTSSRLDYYFDVFLQVEKKLPVAEYLKEVARYNEAVLQDKEEGERVFFAEVTTKYPEMEAHF
AKSRNVKRVERRDLLRFLIENSEFLARDENRWMRSVLEVVRKTSIFFQPQIRTKIMNEGWASYWHEKLFLVDDRIKGHEV
DFARVHAGVTSMPRVGMNPYALGMRLMYQLKDMGDKGRTGYDFHRLSDANQRKEFDAKTEQGDEFLFKVRSNYCDYLFIK
EFVDQDFTNRYDLFVTGKRLDPQRMVWQYYVKSRDAREYRDMVLASLYHPPHIEIAPERGEDGSLYLVHHFEGKQLVSEY
IANTMVGIEYLWGAPVQLETSEAVIEQTRGTAGKEGGEEADITWQRVVYTMNEKTLSRQVL
>Mature_541_residues
MELINQHTKEIMEGCKERARAAGLSFTDESLEYIVTNRDLIELSPKVMIPTLYDYWVHDVEVLRGKGEYELYPHNPYETV
INTRPPISFYNDNNPDWLNVMIFYHVLGHIDFFQNNLYFRHTWEYDFTGQALSDKRVIAKLRAEKGRWVDYILEFARSID
NLVAYHDELSPLFKSPDTVTSSRLDYYFDVFLQVEKKLPVAEYLKEVARYNEAVLQDKEEGERVFFAEVTTKYPEMEAHF
AKSRNVKRVERRDLLRFLIENSEFLARDENRWMRSVLEVVRKTSIFFQPQIRTKIMNEGWASYWHEKLFLVDDRIKGHEV
DFARVHAGVTSMPRVGMNPYALGMRLMYQLKDMGDKGRTGYDFHRLSDANQRKEFDAKTEQGDEFLFKVRSNYCDYLFIK
EFVDQDFTNRYDLFVTGKRLDPQRMVWQYYVKSRDAREYRDMVLASLYHPPHIEIAPERGEDGSLYLVHHFEGKQLVSEY
IANTMVGIEYLWGAPVQLETSEAVIEQTRGTAGKEGGEEADITWQRVVYTMNEKTLSRQVL

Specific function: Appears to be involved in spore cortex formation [H]

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgB [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=338, Percent_Identity=26.0355029585799, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 64013; Mature: 64013

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELINQHTKEIMEGCKERARAAGLSFTDESLEYIVTNRDLIELSPKVMIPTLYDYWVHDV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECCCEEECCCCEECCHHHHHHHHHH
EVLRGKGEYELYPHNPYETVINTRPPISFYNDNNPDWLNVMIFYHVLGHIDFFQNNLYFR
HHHCCCCCEEECCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEE
HTWEYDFTGQALSDKRVIAKLRAEKGRWVDYILEFARSIDNLVAYHDELSPLFKSPDTVT
EEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SSRLDYYFDVFLQVEKKLPVAEYLKEVARYNEAVLQDKEEGERVFFAEVTTKYPEMEAHF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCHHHHH
AKSRNVKRVERRDLLRFLIENSEFLARDENRWMRSVLEVVRKTSIFFQPQIRTKIMNEGW
HHCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH
ASYWHEKLFLVDDRIKGHEVDFARVHAGVTSMPRVGMNPYALGMRLMYQLKDMGDKGRTG
HHHHHCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
YDFHRLSDANQRKEFDAKTEQGDEFLFKVRSNYCDYLFIKEFVDQDFTNRYDLFVTGKRL
CCHHHCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCC
DPQRMVWQYYVKSRDAREYRDMVLASLYHPPHIEIAPERGEDGSLYLVHHFEGKQLVSEY
CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHH
IANTMVGIEYLWGAPVQLETSEAVIEQTRGTAGKEGGEEADITWQRVVYTMNEKTLSRQV
HHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCHHHHEEECCHHHHHHCC
L
C
>Mature Secondary Structure
MELINQHTKEIMEGCKERARAAGLSFTDESLEYIVTNRDLIELSPKVMIPTLYDYWVHDV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEECCCEEECCCCEECCHHHHHHHHHH
EVLRGKGEYELYPHNPYETVINTRPPISFYNDNNPDWLNVMIFYHVLGHIDFFQNNLYFR
HHHCCCCCEEECCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEE
HTWEYDFTGQALSDKRVIAKLRAEKGRWVDYILEFARSIDNLVAYHDELSPLFKSPDTVT
EEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SSRLDYYFDVFLQVEKKLPVAEYLKEVARYNEAVLQDKEEGERVFFAEVTTKYPEMEAHF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCHHHHH
AKSRNVKRVERRDLLRFLIENSEFLARDENRWMRSVLEVVRKTSIFFQPQIRTKIMNEGW
HHCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH
ASYWHEKLFLVDDRIKGHEVDFARVHAGVTSMPRVGMNPYALGMRLMYQLKDMGDKGRTG
HHHHHCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
YDFHRLSDANQRKEFDAKTEQGDEFLFKVRSNYCDYLFIKEFVDQDFTNRYDLFVTGKRL
CCHHHCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCC
DPQRMVWQYYVKSRDAREYRDMVLASLYHPPHIEIAPERGEDGSLYLVHHFEGKQLVSEY
CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHH
IANTMVGIEYLWGAPVQLETSEAVIEQTRGTAGKEGGEEADITWQRVVYTMNEKTLSRQV
HHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCHHHHEEECCHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144469; 9579061; 9384377 [H]